Glossary extracted starting with automatic seeds, with BOW for the domain bio and language EN
outcrop | Area of exposed bedrock at the Earth's surface with no overlying deposits of soil or regolith. |
continental slope | the sloping sea bottom of the continental margin that begins at a depth of about 100 to 150 m at the shelf edge and ends at the top of the continental rise or in a deep-sea trench |
polygamy | both sexes mating with more than one other individual |
heuristic | problem analysis based on informal judgment or experience versus data manipulation; a guideline or rule of thumb that is normally effective in dealing with a given situation |
temperate deciduous forest | A biome located throughout midlatitude regions where there is sufficient moisture to support the growth of large, broad-leaf deciduous trees. |
synbiotic | an appropriate synergistic combination of pre- and probiotics |
f-prime | An extrachromosomal F-plasmid that carries a fragment of chromosomal DNA. |
magenta | reddish purple color |
internesting | as it pertains to marine turtles, the interval between a successful nest and the next nesting attempt |
start | A regulatory point in the yeast cell cycle that occurs late in G1 |
heterocercal | a caudal fin where the upper lobe is larger than the lower lobe |
inner cell mass | Mass of cells on one side of a blastocystwhich will form the body of the embryo |
recombinant technology | Procedures used to join DNA sequences from different sources |
doppler shift | the change in the tone of a sound caused by the sound source moving away or towards the listener |
tetraxon | in sponges, a spicule with four rays |
children | Sibling |
probability | The chance of observing a particular future event; a simple ratio of the number of observed events divided by the total number of possible events. |
hapteron | a single branch within a holdfast |
vertebrate | Any member of the chordate group Vertebrata, which are characterized by a spinal column or backbone. |
acth | Abbreviation of adrenocorticotropic hormone. |
antigen | A substance, usually a protein, that stimulates the body to produce antibodies against it. |
ribosome | Particle composed of ribosomal RNAs and proteins |
law of tolerance | the presence, number, and distribution of species in an ecosystem are determined by whether the levels of one or more physical or chemical factors fall within the range tolerated by the species |
solute | A substance that is dissolved in a solution. |
diurnal | active during the day light hours |
geology | The field of knowledge that studies the origin, structure, chemical composition, and history of the Earth and other planets. |
sula reef | a deep water Lophelia reef located on the Sula Ridge on the Mid-Norwegian shelf at depths of 200 - 300 m |
pony bottle | a small, but independent alternate air supply for scuba divers, to be used in case of main air failure. It is a small scuba tank with an attached regulator |
stratigraphy | Subdiscipline of geology that studies sequence, spacing, composition, and spatial distribution of sedimentary deposits and rocks. |
primary male or female | a male or female that is genetically determined at birth or hatching and is not the result of sex change |
monandrous | Where females mate with a single male. |
backscattering | Portion of solar radiation directed back into space as a result of particle scattering in the atmosphere. |
stakeholder | an individual or group with an interest in the success of an organization in delivering intended results and maintaining the viability of the organization's products and services |
elastic limit | Maximum level of elastic deformation of a material without rupture. |
race | a population differing from others; refers to a unit below the subspecies level which is not given a taxonomic name |
virus | A group of particles that do not have a cellular structure and cannot replicate outside of a host cell |
strict aerobe | An organism that can survive only in an atmosphere of oxygen, which is used in aerobic respiration. |
subtree pruning and regrafting | A method for searching phylogenetic tree space whereby a new tree is generated from a starting tree by moving entire branches (along with subbranches) to a new position in the tree. |
breeding value | The sum of the average effect of each gene |
titration | Gradual increase or decrease of a drug dose until finding the dose that works best |
nonpoint | not from a single, well-defined site |
bleeding disorders | A group of conditions in which a person's body cannot properly develop a clot, causing an increased chance of bleeding. |
ultramafic | Rock that is rich in magnesium and iron content. |
linkage disequilibrium | Nonrandom associations between alleles at two or more genetic loci. |
competition | a biological interaction that can limit population growth |
medial moraine | Deposit of material found down the center of a glacier |
recombination hot spot | A localized region with exceptionally high recombination rate. |
lesion severity | the semiquantitative, subjective ranking of the degree of damage or extent of pathological change in the tissues of an organism |
chromosome | normal females carry two X chromosomes. |
gap phases | the phases of the cell cycle known as G1 and G2, during which relatively less obvious cellular activity is visible |
genealogical species | A group of individuals for whom the genealogies at all loci in the genome are reciprocally monophyletic |
reef system | a cluster of reefs |
fault zone | an area in which there are several closely spaced faults |
argent | silvery color |
gustation | pertains to the sense of taste |
western blot | a technique used for analyzing a mixture of proteins to show the presence, size, and abundance of one particular type of protein. |
molecule | Minute particle that consists of connected atoms of one or many elements. |
nesting | the act of constructing a nest |
mating types | A polymorphism in which individuals can mate only with a different type |
arbuscular mycorrhiza | A distinct type of endomycorrhiza formed by glomeromycete fungi, in which the tips of the fungal hyphae that invade the plant roots branch into tiny treelike structures called arbuscules. |
winogradsky column | a glass column with an anaerobic lower zone and an aerobic upper zone, which allows growth of microorgansims under conditions similar to those found in a nutrient-rich body of water.It is a simple device for culturing a large diversity of microorganisms |
necrophagy | feeding on dead animals or carrion |
newborn screening | Testing done within days of birth to identify infants at increased risk for a specific genetic disorder so that treatment can begin as soon as possible; when a newborn screening result is positive, further diagnostic testing is usually required to confirm or specify the results and counseling is offered to educate the parents |
kure atoll | the most remote of the Northwestern Hawaiian Islands, and the northern-most coral atoll in the world, located at the extreme northwest end of the Hawaiian archipelago |
heat shock proteins | a group of proteins that are present in the cells of all living organisms |
downwelling | a downward current of surface water in the ocean, usually caused by differences in the density of seawater |
lepton | a class of subatomic particles that constitute matter which have no measurable size and do not interact with the strong nuclear force |
storm surge | a rise above normal water level on the open coast due to the action of wind stress on the water surface |
labeled | to mark substances in a way that they can easily be identified |
case controlled study | A study comparing persons with a given condition or disease (the cases) and persons without the condition or disease |
insect | Relatively small and simple animals that have a rigid external skeleton, three body sections, three pairs of legs, and antennae |
cave | A natural cavity or recess that is roughly positioned horizontally to the surface of the Earth. |
dyne | A unit of force that creates an acceleration on a mass of 1 gram equal to 1 centimeter per second |
false negative | an experimental outcome that incorrectly yields a negative result |
cod | a measure of the chemically oxidizable material in water which provides an approximation of the amount of organic and reducing material present |
reaction time | the duration between the beginning of stimulation and the initiation of a response |
imprinting | a biochemical phenomenon that determines, for certain genes, which one of the pair of alleles, the mother's or the father's, will be active in that individual. |
iconel tag | a metal tag that is attached to the trailing edge of a seaturtle's flipper to provide a means of unique identification |
biochemical oxygen demand | the amount of oxygen taken up by microorganisms that decompose organic waste matter in water |
rime | Deposit of ice crystals that occurs when fog or super cooled water droplets comes in contact with an object with a temperature below freezing (0° Celsius) |
multivariate | a term that describes statistical, mathematical, or graphical procedures that involves two or more variables simultaneously |
numericlature | an attempt to express the natural order (i.e |
penniform | feather-shaped |
degenerate character | a character, trait or structure that has evolved to a less developed state from its ancestral form or function |
entropy | A quantitative measure of disorder or randomness, symbolized by S. |
inner core | Inner region of the Earth's core |
parity | The order in which children are born. |
rip current | A strong relatively narrow current of water that flows seaward against breaking waves. |
anteromesal | in the front and along the midline of a body |
sandstone | A sedimentary rock composed dominantly of grains that are 0.02 to 2 millimeters in diameter |
statistic | an estimate based on a sample or samples of a population, providing an indication of the true population parameter |
alprazolam | A medication used to treat anxiety or insomnia. |
isometry | change in overall size that maintains the same relative proportional shape |
heterosis | The greater vigour in terms of growth, survival and reproductive performance of outcrosses, particularly crosses between highly inbred lines |
norepinephrine | See noradrenaline. |
ozone | a gaseous molecule that contains three oxygen atoms (O3), instead of the usual two (O2) |
phenotypic variance | The variance of the phenotypic value, var(P)= VP. |
stetson reef | a deep water coral site along the eastern Blake Plateau offshore South Carolina |
taxonomic key | a tabulation of diagnostic characters of taxa in dichotomous couplets to facilitate rapid identification |
additive tree | A phylogenetic tree in which the branch lengths are proportional to the evolutionary distance between nodes; also known as a phylogram. |
principal investigator | The scientist or scholar with primary responsibility for the design and conduct of a research project |
subsolar point | The location on the Earth where the Sun is directly overhead |
satellite mapping | digital maps derived from satellite images |
monomer | One of the component units of a polymeric molecule. |
sipuncula | an animal phylum that contains the peanut or starworms |
cross-flow filtration | A technique for filtering thick fluids by flowing the fluid across the filter |
dormant | /DORE-mənt, -mant/ adj |
relational database | a method of structuring data as collections of tables that are logically associated to each other by shared attributes |
adeniform | gland-shaped; resembling a gland |
cohort | A group of individuals of the same age, from birth until all are dead. |
axis | An imaginary line passing through a body or organ around which parts are symmetrically aligned. |
dissimilar | Not similar or alike; different in appearance, properties, or nature; unlike. |
bedding plane | A layer in a series of sedimentary beds that marks a change in the type of deposits. |
discrete probability distribution | a probability distribution is called discrete if its cumulative distribution function only increases in jumps; a probability distribution is discrete if there is a finite or countable set whose probability is 1 |
reef rubble | dead, unstable coral pieces often colonized with macroalgae |
proton | A subatomic particle with a single positive electrical charge, found in the nucleus of an atom. |
coercive cognitively impaired | Having either a psychiatric disorder or a development disorder that affects cognitive or emotional functions to the extent that capacity for judgment and reasoning is significantly diminished. |
series | in taxonomy, the sample available for study |
calathiform | cup-shaped |
va | See additive genetic variance. |
dysarthria | Slurred or otherwise impaired speech |
paramagnetism | magnetic property in certain iron-bearing minerals that cause them to be weakly attracted to magnetic fields |
monophagous | eating one kind of food only |
tympanic membrane | Another name for the eardrum. |
lay net | a stationary gillnet used in nearshore waters |
sponge | the egg mass of a female crab, which she carries attached to long "hairs" on her pleopods |
semelparity | the reproductive condition where individuals reproduce only once during their lifetime |
buffer | A solution containing agents that maintain a constant pH during a biochemical reaction. |
terri | a prefix meaning "earth" |
dynamic equilibrium | A dynamic equilibrium occurs when a system displays unrepeated average states through time. |
pmf | peptide mass fingerprinting |
correlate | to show a relationship between entities |
undercut bank | Steep bank found on the inside of stream meanders |
irreducibly complex | A system that cannot function if any one of its components is missing. |
innate | not established by conditioning or learning; "an unconditioned reflex"; a genetic behavior pattern |
anticodon | a set of three tRNA bases that match (complement) a set of three mRNA bases. |
vaginate | enclosed by a sheath |
lek | An arena where males gather and are chosen as mates by females. |
colony-stimulating factor | A treatment agent used to stimulate the production of certain blood cells in the bone marrow |
nanobiology | biological studies at the extremely small to molecular levels |
repetitive dive | any dive within a certain time frame after a previous dive |
whorl | a ring; one turn of a spiral |
cheliform | pincer-shaped |
nocturnal | being primarily active at night |
random sampling | a sampling technique where a group of subjects (a sample) is selected for study from a larger group (a population) |
regression | A statistic that describes the relationship of two variables |
low pressure | An area of atmospheric pressure within the Earth's atmosphere that is below average |
amoeboid | Having no definite shape to the cell, able to change shape. |
malignant tumor | A tumor that invades normal tissue and spreads throughout the body. |
sphingomyelin | A phospholipid consisting of two hydrocarbon chains bound to a polar head group containing serine. |
unpublished name | in taxonomy, any name which has not been printed and circulated to meet the criteria of publication as stated by the International Code of Zoological Nomenclature |
differential equation | An equation that gives the rate of change of a system as a function of its present state. |
dopa | L-3,4-dihydroxyphenylalanine. |
rift valley | Steep sided valley found on the Earth's surface created by tectonic rifting. |
north magnetic pole | Location in the Northern Hemisphere where the lines of force from Earth's magnetic field are vertical |
soil-heat flux | The rate of flow of heat energy into, from, or through the soil. |
stationary front | A transition zone in the atmosphere where there is little movement of opposing air masses and winds blow towards the front from opposite directions. |
blog | basically a journal that is available on the web |
surf | a collective term for "breakers"; the wave activity in the area between the shore line and the outermost limit of breakers |
clinical trial | The evaluation in humans of the effectiveness of a new drug therapy |
hematologist | A doctor who specializes in the treatment of blood diseases. |
trial | Study |
pediatric | Relating to children, childhood. |
repeat masking | The method by which repeated sequences and low-complexity regions are hidden, usually used in searches by alignment and homology-searching programs. |
isogamous | having haploid gametes that are similar in size, structure and motility |
chi-square | a statistical technique whereby variables are categorized to determine whether a distribution of scores is due to chance or experimental factors |
plexus | a group or network of intersecting nerves and/or blood vessels |
lobe | A tongue-like extension of some material |
counter-radiation | Redirection of the Earth's longwave radiation back to the surface because of the greenhouse effect. |
neurons | N(Y)OOR-awnz/ Nerve cells (see diagram above); these gray or reddish cells are the fundamental units of the nervous system. |
bathymetric map | a map which delineates the form of the bottom of a body of water by the use of depth contours (isobaths) |
server | a computer which is designed to be accessed by many other computers |
clostridium | a genus of Gram positive anaerobic spore-forming bacteria |
darwinian fitness | A measure of the relative contribution of an individual to the gene pool of the next generation. |
denticulate | having an edge with small projecting teeth |
acantho- | a prefix meaning "with spines" |
dystrophy | a disorder caused by defective ³nutrition² or metabolism. |
naviform | boat-shaped |
riparian | having to do with living or being located on the edges or banks of streams or rivers |
hydrophobic | Not soluble in water. |
supergene | a group of neighboring genes on a chromosome that tend to be inherited together and sometimes are functionally related |
lophelia reef | a reef formed by Lophelia pertusa, a deep-sea coral found in all oceans except the Arctic Ocean |
codominant | two genes that are neither dominant or recessive; neither masks the other, as in the case of red geraniums crossed with white geraniums yielding pink geraniums. |
aperture | an opening in some structure |
negative feedback | Change in the state of a system that counteracts the measured effect of the initial alteration. |
hydrophilic | 'likes water' (hydro = water; philic = like) |
barb | a type of spine armed with teeth pointing backwards |
specific name | the second name in a binomen and in a trinomen |
blade | a leaf-like structure |
game | See evolutionary game. |
basalt plateau | Extensive continental deposits of basaltic volcanic rock. |
zoospore | Flagellated spore occurring in chytrid fungi. |
ultraviolet-c | UV with wavelengths less than 280 nm |
synapomorphy | A shared derived character state that is indicative of a phylogenetic relationship among two or more operational taxonomic units (OTU). |
polydactyly | A genetic abnormality that causes a person to be born with more than ten fingers and/or toes |
endoplasmic reticulum | A network of membranous tubules in the cytoplasm of a cell; involved in the production of |
gas hydrate | see "methane hydrate" |
biological replicates | Biological replicates utilize independently collected samples. |
bactericide | a substance that kills bacteria |
coordinate taxon | in cladistics, a group within a monophyletic lineage at the same branching level as another |
monsoon | A regional scale wind system that predictably change direction with the passing of the seasons |
first revisor | the principle that the relative precedence of two or more names or nomenclatural acts published on the same date, or of different original spellings of the same name, is determined by the first reviser |
downdraft | Downward movement of air in the atmosphere. |
protected polymorphism | When each allele will increase from very low frequency, we say that the polymorphism is protected. |
edentate | toothless |
siberian high | High pressure system that develops in winter over northern central Asia. |
lod score | logarithm of the odd score; a measure of the likelihood of two loci being within a measurable distance of each other. |
bicentric distribution | the presence of a species (or other taxonomic unit) in two widely separated geographic areas |
law | a description of how a natural phenomenon will occur under certain circumstances; a statement that summarizes the results observed in an experiment that is repeated many times by many different scientists |
maximum parsimony | A principle that states that when considering multiple explanations for an observation, one should first investigate the simplest explanation that is consistent with the facts. |
epistasis | A type of genetic interaction: the nonreciprocal interaction of nonallelic genes in which the expression of one gene masks the expression of another |
discopodous | /də-SKAWP-pə-dəs, dis-/ adj |
ancestor | In bioinformatics, this term refers to terms in a hierarchical controlled vocabulary like ones containing Gene Ontology (GO) terms |
ion | An atom that has gained or lost electrons, thus acquiring a charge. |
institution | A residential facility that provides food, shelter, and professional services (including treatment, skilled nursing, intermediate or long-term care, and custodial or residential care). |
setose | bearing setae |
zwitterion | A dipolar ion containing ionic groups of opposite charge. |
limoniform | lemon-shaped |
fishing mortality | deaths in a fish stock caused by fishing |
caldera volcano | Explosive type of volcano that leaves a large circular depression |
correlation coefficient | Statistic that measures the degree of linear association between two variables |
proximal | the direction towards center of the body; opposite of distal |
neurosecretory cell | A specialized nerve cell that releases a hormone into the bloodstream in response to signals from other nerve cells; located in the hypothalamus and adrenal medulla. |
tropical storm | An organized group of thunderstorms often found over a tropical ocean that generates a cyclonic flow of between 64 and 118 kilometers per hour |
partial pressures | The concentration of gases; a fraction of total pressure. |
defloration | /dehf-lə-RAY-shən/ n |
micron | a unit of length equivalent to a micrometer (µm), one-millionth of a meter or 0.00003937 inch |
antagonistic pleiotropy | Describes alleles that increase one fitness component but decrease another |
aneuploidy | The occurrence of a particular chromosome in an unusual number — for example, one or three copies per cell, when the usual number (as in humans) is two |
proprioceptor | a specialized sensory nerve ending that monitors internal changes in the body brought about by movement and muscular activity |
bathyal zone | region of the seafloor from the shelf edge (200m) to the start of the abyssal zone (2,000m) |
barren zone | the region of a coral reef seaward of the lower palmata zone and just landward of the buttress or mixed zone |
lophophore | A horseshoe-shaped or circular fold of the body wall bearing ciliated tentacles that surround the mouth. |
ata | one (1) ata is the atmospheric pressure at sea level |
divide | The topographic ridge that separates drainage basins. |
parallel evolution | the development of similar forms by related but distinct phylogenetic lineages |
conifer | A gymnospenn whose reproductive structure is the cone |
wet deposition | The transport of gases and minute liquid and solid particles from the atmosphere to the ground surface with the aid of precipitation or fog |
aqueous solution | a solution in which water is the solvent |
organism | any form of unicellular or multicellular life; a living thing that has (or can develop) the ability to act or function independently |
embryo | The structure that develops from the zygote. |
corrugated | having a surface with alternating parallel ridges and grooves |
chromophore | A functional group that absorbs light, giving rise to color. |
groundwater seep | subsurface water flowing into a coastal body of water |
mortality | Death or death rate |
informed consent | An individual willingly agrees to participate in an activity after first being advised of the risks and benefits |
mtdna | See mitochondrial DNA. |
phenotype | all the observable traits a person inherits, as opposed to the genome, or all the traits inherited. |
osseus | bony |
colloid | a stable suspension of particles that, though larger than in a true solution, do not settle out |
genic conversion | see: genetic conversion. |
clean water act | an act passed by the U.S |
zosterophyll | A type of early vascular plant that carried spores laterally along the stem. |
dive table | dive tables present dive times for specific depths, adherence to which, the scuba diver can avoid contracting decompression sickness (the bends) |
phylogram | A phylogenetic tree in which the lengths of the branches reflect the number of genetic changes that have taken place in a particular DNA or RNA sequence in the various lineages. |
sister taxa | two taxa that are more closely related to each other than either is to a third taxon; monophyletic taxa that are each other's closest relatives, i.e., they share an immediate common ancestral species |
other paralogues | Paralogues which are very far away from the other members of a paralogue family |
swath | the area of Earth's surface or atmosphere measured by an instrument during a single satellite overpass; a path or strip |
lithification | The process of cementation, compaction, desiccation, and crystallization of sediments into solid rock. |
air compressor | an apparatus that compresses or pressurizes air for scuba tanks |
branchial crown | in marine polychaete worms, a structure surrounding the mouth composed of ciliated, bipinnate filaments which function in suspension filter feeding and respiration |
interstitial fauna | animals that live in the spaces within sediment particles (interstitial spaces) |
adsorbtion | adhesion of an extremely thin layer of molecules to the surface of a solid with which they are in contact, as when charcoal adsorbs gases |
hump | the raised area behind the head in certain fish species, usually mature adults or breeding males |
parturition | The expulsion of a baby from the mother; also called birth. |
sensory transduction | The conversion of stimulus energy to a change in the membrane potential of a sensory receptor. |
isohyetal line | a line drawn on a map or chart joining points that receive the same amount of precipitation |
feedback systems | Control mechanisms whereby an increase or decrease in the level of a particular factor inhibits or stimulates the production, utilization, or release of that factor; important in the regulation of enzyme and hormone levels, ion concentrations, temperature, and many other factors. |
admedial | near the medial plane |
insulin | A hormone that promotes the conversion of glucose to glycogen |
thermohaline circulation | the density-driven convective circulation system of the world's oceans |
node | a knob or swelling; a branching point on a dendrogram (phylogenetic tree); any single computer connected to a network; in a geographical information system (GIS), a node is the beginning, connecting and ending point of an arc |
odds ratio | A measure of relative risk that is usually estimated from case-control studies. |
spatial summation | A phenomenon of neural integration in which the membrane potential of the postsynaptic cell is determined by the combined effect of EPSPs or IPSPs produced nearly simultaneously by different synapses. |
electromagnetic radiation | energy that travels through space in the form of waves |
overturned fold | A fold in rock layers where one limb is pushed past the perpendicular |
obtuse | blunt or rounded at the end |
chemical weathering | Breakdown of rock and minerals into small sized particles through chemical decomposition. |
hanging valley | A secondary valley that enters a main valley at an elevation well above the main valley's floor |
tropical storm | a tropical cyclone with maximum winds less than 34 m/sec (75 mile per hour) |
labial | pertaining to the lips |
whole-exome sequencing | Also referred to as targeted exome capture |
stenotele | a stinging nematocyst which contains a spirally coiled thread armed with spiral rows of projections |
infrared radiation | Form of electromagnetic radiation with a wavelength between 0.7 and 100 micrometers (µm) |
natural occurrence | the presence of a substance in nature, as distinct from presence resulting from inputs from human activities |
scientific method | the approach taken by scientists to make observations of and theories about the world around them, and beyond |
global warming | A term used to describe a warming event that raises Earth's average temperature and causes an associated climate change. |
cell | The basic unit of any living organism that carries on the biochemical processes of life |
atom | The smallest unit of matter that retains the properties of an element. |
olfaction | the sense of smell |
reef mining | the large-scale removal of living reef corals and fossilized limestone from shallow reef environments for domestic use as building materials, lime production and aggregate |
terminal bud | Embryonic tissue at the tip of a shoot, made up of developing leaves and a compact series of nodes and internodes. |
striated | marked with lines or grooves |
beaufort wind scale | Descriptive system that determines wind speed by noting the effect of the wind on the environment |
screening | The process of testing for disease in a person who does not show signs of having the disease (nonsymptomatic person) |
intermittent spawning | spawning at intervals |
helophilous | having an affinity for marshes |
valence | the chemical combining capacity of an element or ion; the number of electrons that are used by an atom to form a compound |
standard code | See canonical code. |
dag | Directed Acyclic Graph (DAG) refers to a way of arranging objects based on their relationships and allows a child to have multiple parents. |
rhizaria | Another name for the kingdom of eukaryotes known as Cercozoa. |
myocardial infarction | Heart attack |
morphology | Shape, form, external structure, or arrangement, especially as an object of study or classification |
comet | A large mass of ice and dust that has an orbit around a star. |
dbsnp | The Single Nucleotide Polymorphism database (dbSNP) is a public-domain archive for a broad collection of simple (short) genetic polymorphisms |
soil water | The water found occupying the pore spaces between soil particles. |
diffusion | the movement of particles from a region of higher concentration to a region of lower concentration |
bleach | to make or become white or colorless by means of chemicals, by exposure to solar radiation, etc |
contraindicated | Should not be used |
ultraviolet-b | UV with wavelengths 280 - 315 nm |
spit | a stretch of sand, attached to the land at one end, and extending out into the sea |
short-day plant | A plant that flowers, usually in late summer, fall, or winter, only when the light period is shorter than a critical length. |
balancing selection | Natural selection that maintains stable frequencies of two or more phenotypic forms in a population (balanced polymorphism) . |
single-masked design | Typically, a study design in which the investigator, but not the subject, knows the identity of the treatment assignment |
branch | Portion of an evolutionary tree diagram connecting two nodes. |
allo - | a prefix meaning other, or differing from the normal or usual |
alternative hypothesis | in statistics, the hypothesis that is adopted when the null hypothesis is rejected |
plant hormone | Member of a group of small molecules that coordinate the responses of plant tissues to environmental signals. |
poisonous | an organism that contains poison in its tissues that can be harmful if the organism is ingested |
mesopelagic zone | a layer (zone) of the ocean which lies just below the epipelagic zone |
protoplasm | the substance inside a living cell, once thought to be simple, but now known to be a complex network of biomolecules, microscopic structures and molecular machines; includes the cytoplasm and (in eukaryotes) the nucleus. |
hydrophobic molecule | A nonpolar compound that does not form favorable binding interactions with water, and is insoluble in water. |
plenary power | in taxonomy, power of the International Commission on Zoological Nomenclature to suspend articles of the Code to settle particular cases |
estimator | An estimator is any value calculated from the sample data For example, the sample mean is an estimator of the population mean. |
intralesional | into the cancerous area in the skin. |
cell | the basic unit of life; the smallest basic part of every living thing that can function by itself |
megasclere | a large spicule in sponges |
b | Barrier method |
mitosis | nuclear division. |
macrotidal | coastal ocean or waterway with a high mean tidal range e.g., greater than 4 meters |
axial swimming | the predominant swimming mode of fishes |
hitchhiking | The increase in a neutral allele that happens to be associated with a selectively favorable allele at another locus |
additive genetic variance | The total variance, VA, contributed by the additive effects of each gene (in other words, the variance of breeding values) |
sagittal | relating to the sagittal plane, which extends through the midline of a bilateral animal, dividing it into two equal halves |
vacuoles | Membrane-bound sacs for storage, digestion, and waste removal - Contains water solution - Contractile vacuoles for water removal (in unicellular organisms) |
neural plate | Thickened strip of ectoderm in early vertebrate embryos that forms along the dorsal side of the body and gives rise to the central nervous system. |
biogenous | produced by living organisms |
sedentary | not moving |
selection coefficient | The difference between two fitness values, representing a relative measure of selection against an inferior genotype. |
unconfined aquifer | Aquifer that is not restricted by impervious layers of rock. |
open coast | an unenclosed and exposed coastal margin |
barrier to entry | a condition that makes it difficult for competitors to enter the market; e.g |
lower mantle | Layer of the Earth's interior extending from 670 to 2,900 kilometers below the surface crust |
inert | refers to unmoving or unchanging |
furcate | to divide into branches; to fork |
syndrome | a set of signs occurring together; the sum of signs of any diseased state |
learning | A behavioral change resulting from experience. |
decompression chamber | a hyperbaric steel enclosure used to treat victims of decompression sickness (the "bends") in which the air pressure is first gradually increased and then gradually decreased |
acid precipitation | Rain, snow, or fog that is more acidic than pH 5.6. |
hastate | spear-shaped |
developmental response | morphological and physiological characteristics an organism developed in response to prolonged exposure to environmental conditions |
protoplast fusion | Technique involving the merger of two cell types into a single cell. |
soft dorsal | a dorsal fin containing only soft rays, or the soft-rayed hind part of the dorsal fin, if both spines and soft rays are present (as in squirrelfish) |
system | A more complex organization formed from a combination of components. |
epipsammic | attached to, or moving through, sand particles |
gynandromorph | An individual in which one part of the body is female and another part is male; a sex mosaic. |
physical change | a change from one state to another, as when water changes from ice to its liquid state |
jetsam | objects that have been thrown overboard in order to lighten a ship when it is in trouble |
tergum | the back of an animal |
consolidated rock | tightly bound geologic formation composed of sandstone, limestone, granite, or other rock |
salting out | The decrease in protein solubility that occurs when salts such as ammonium sulfate are present at high concentrations. |
correlogram | a graph illustrating the auto-correlations between members of a time series (vertical axis) for different separations in time (horizontal axis) |
adient | tending toward or approaching a source of stimulation |
performance test | Obtaining a phenotypic measure on an individual for the purpose of assessing its genetic merit. |
polar stratospheric clouds | High altitude clouds found in the stratosphere where the temperature is less than -85° Celsius |
double-blind | Neither the subject nor physician can know what is being given |
quadrat | a square or rectangular sampling unit of known area (e.g.,1 m2) within which organisms are counted or measured |
pore water | water between the grains of a sediment; also called interstitial water |
protractile | capable of being protruded or thrust out |
cycloid | having a smooth-edged margin |
multimedia | the use of computers to present video, sound, graphics, and text |
dalton | A unit of mass equivalent to the mass of a hydrogen atom (1.66 x 10-24 g) |
pedal disc | a disc at the aboral end of the body trunk used for attachment |
phylocode | a proposed alternative to the Linnaean system of biological classification |
stable atmosphere | Condition in the atmosphere where isolated air parcels have a tendency to sink |
apical | relating to or located at the tip (an apex), or opposite to the base |
interchromosomal effect | In heterozygotes, the effect of an inversion on recombination rates on other chromosomes. |
sucking disk | a disk-like structure used by some fishes to attach itself to rocks or vegetation |
farctate | a filled or solid structure, as opposed to one that is tubular or hollow |
bank | a broad elevation of the sea floor around which the water is relatively shallow but not a hazard to surface navigation |
association constant | The measure of the degree of association of a complex |
stoichiometry | the area of mathematics that is concerned with numerical relationships of chemical formulas and chemical equations; determines the molar ratios of reactants and products in an overall chemical reaction |
phase-contrast microscopy | A type of microscopy in which variations in density or thickness between parts of the cell are converted to differences in contrast in the final image. |
cation | An ion carrying a positive atomic charge. |
recurrence interval | The average time period that separates natural events of a specific magnitude |
trauma | injury |
borer | an invertebrate that bores into wood, stone, coral, or another animal's shell |
bottom trawl | a method of fishing in which a large bag-shaped net is dragged along the bottom, behind the vessel |
pure tone | a sound which consists of one single frequency |
haplotype | One of the alternative forms of the genotype of a gene complex |
morphospecies | the traditional way to distinguish one species from another is to use differences in morphology which could involve size, shape, body part proportions, or color of external and/or internal body structures |
basalt | a dark, fine-grained igneous rock composed of minerals rich in ferromagnesian silicates |
coprophagous | pertains to feeding on fecal matter |
campanulate | bell-shaped |
metamorphic rock | rock that has been altered physically, chemically, and mineralogically in response to strong changes in temperature, pressure, shearing stress, or by chemical action of fluids |
mosaic evolution | The evolution of different features of organisms at different rates. |
anther | In an angiosperm, the tern nal pollen sac of a stamen, where pollen grains with male gametes form. |
agulhas ring | large pulses of warm and salty water of Indian Ocean origin which enter the Atlantic Ocean directly south of the Cape of Good Hope in the form of anticyclonic eddies |
elongation | During protein synthesis, the growth of the polypeptide chain through the addition of |
colonized hardbottom | a substrate formed by the deposition of calcium carbonate by reef building and other organisms |
gill net | a net primarily designed to catch fish by entanglement in a mesh that consists of a single sheet of webbing which hangs between cork line and lead line, and which is fished from the surface of the water |
trolling | a fishing method where lures or baits attached to lines are towed behind a slowly moving boat |
agricultural land | land managed for crops, pasture, or other agricultural use |
receptor potential | An initial response of a receptor cell to a stimulus, consisting of a change in voltage across the receptor membrane proportional to the stimulus strength |
allometric equation | the general form of the allometric equation is y = bxa where y = measure/process in question, x is size, a is the allometric exponent (which tells you the relationship between x & y), and b = a constant (the allometric coefficient) |
esker | Long twisting ridges of sand and gravel found on the Earth's surface |
ifrs | International Financial Reporting Standards; Future EU: wide standards produced by the IASB |
laparotomy | A procedure where a small cut is made in the stomach area, so a physician can look at the organs |
matrilateral | Used by anthropologists for relatives on the mother's side of the family |
ribosomes | Structure made up of proteins and RNA that are the sites of protein production in the cell |
mild hemophilia | A categorical term used to describe someone with a factor VIII or IX level ranging from 5% to 40% of normal blood levels of factor. |
medicare | A US federal medical insurance program for senior citizens and the disabled. |
chemostat | Device for maintaining a bacterial population in the exponential growth phase by controlling nutrient input and cell removal. |
peripheral nervous system | Peripheral nervous system (PNS) is a term referring to the nerves that lie outside of the central nervous system (brain and spinal cord) |
algorithm | A computer program (or set of programs) which is designed to systematically solve a certain kind of problem |
helical axis | If you imagine the two strands of a double helix wrapped around a wire core, this wire would represent the helical axis. |
morphometric character | a measurement of a body part, e.g., head length or eye diameter |
hypolithic | living on lower surfaces of rocks |
eon | The largest division of geologic time |
environmental deviation | The difference E between the expected trait value of a given genotype and its actual value. |
gazetteer | a dictionary or index of geographical names with locations |
bracycardia | Slow heartbeat |
hydrocarbon | An organic molecule consisting only of carbon and hydrogen. |
catheter | A flexible tube inserted into the body to transport fluids into or out of the body. |
bootstrap | A statistical method for measuring consistency in datasets in which new simulated datasets are generated by sampling with replacement |
scrotal circumference | Simple maximal circumference measured around the central portion of the paired testes. |
ultraviolet-a | UV with wavelengths 315 - 400 nm |
molecular recombination | The physical cutting and joining of DNA molecules. |
contaminant | an undesirable substance not normally present, or an usually high concentration of a naturally occurring substance in the environment; a substance in water that might adversely affect the health and welfare of the biota |
central chord | the central part of the axis of an octocoral composed of gorgonin or gorgonin permeated with calcareous material |
echo sounder | an instrument for determining the depth of water by measuring the time of travel of a sound-pulse from the surface of a body of water to the bottom and back |
monitoring | the systematic collection of data over time |
variance | A measure of the spread of a distribution about its average value. |
pelycosaur | Any member of a group of Permian synapsid vertebrates |
refractometer | an instrument for measuring radiation energy |
nitrogen narcosis | a hazardous condition that scuba divers may experience at depths usually in excess of 80 ft (24.38 m) |
surrogate | A person or animal that functions as a substitute for another |
ripple | Stream bed deposit found streams |
micrometer | an instrument for measuring very small distances |
n | In the results of a BLAST search, the number of HSPs that are present in the set that was assigned the lowest P-value is reported in the "N" column. |
neuston | planktonic organisms associated with the air-water interface |
canal | a groove, tube, or duct |
freefloat | Proportion of a company's listed shares that is freely available for trading |
diaphanous | thin and translucent; semi-transparent |
halite | Sedimentary rock created by the chemical precipitation of sodium and chlorine. |
interaction variance | The variance in a quantitative trait, VI, caused by epistatic interactions between loci |
anthocyathus | the disklike crown portion of solitary stony corals that separates from the stalk (anthocaulus) |
neurophysiology | the branch of neuroscience that studies the physiology of the nervous system |
sikes act | passed in 1960, and amended several times, the Sikes Act authorizes the Secretary of Defense to develop cooperative plans for conservation and rehabilitation programs on military reservations and to establish outdoor recreation facilities |
aragonite saturation horizon | a natural boundary in the oceans below which organisms such as stony corals cannot maintain calcium carbonate structures |
mixed strategy | Where individuals play two or more strategies at random. |
disputed island | formerly or currently considered U.S |
allometry | Change in proportions with body size |
current | generally, a horizontal movement of water; a body of air, water, etc |
nuclear magnetic resonance | N(Y)OO-klee-ur/ A technique used in analyzing the atomic composition of chemical compounds |
solvent | the liquid in which a solute is dissolved to form a solution |
complete flower | A flower that has sepals, petals, stamens, and carpels. |
radiation | energy that comes from a source and travels through some material or through space |
covariance | Measure quantifying the degree to which two characteristics vary together. |
variance | The mean squared deviation from the average: |
radial velocity | component of motion toward or away from a given location |
remote sensor | Mechanical devices used to remotely sense an object or phenomenon. |
dimeric | /die-MARE-ick/ adj |
name | 1 |
rebar | short for reinforcing bar |
eukaryote | Organisms whose cells have a membrane-bound nucleus and many specialized structures located within their cell boundary |
neoteny | Reproduction by juveniles |
pangaea | The supercontinent formed near the end of the Paleozoic era when plate movements brought all the landmasses of Earth together. |
phenetic classification | classification based on degree of overall similarity |
commissure | a juncture or seam; the juncture where two sides of a nervous system are joined |
stem | The aboveground part of the axis of vascular plants, as well as anatomically similar portions below ground (such as rhizomes). |
due diligence | the process by research is conducted to determine the value of an investment, licensing agreement, merger, or other similar activity. |
macroevolution | Evolutionary change above the species level, including the appearance of major evolutionary developments, such as flight, that we use to define higher taxa. |
bottlebrush branching | describes a branch with compact radial sub-branches |
calamite | Any member of the lineage of giant horsetails, which belonged to the Sphenopsida, a group that also includes smaller plants |
tropical rainforest | A terrestrial biome characterized by high levels of precipitation and warm temperatures year-round. |
kilocalorie | A thousand calories; the amount of heat energy required to raise the temperature of 1 kg of water by 1°C. |
retro- | backwards |
association analysis | A genetic variant is genotyped in a population for which phenotypic information is available (such as disease occurrence, or a range of different trait values) |
isobath | a line on a map or chart that connects all points having the same depth below a water surface |
ecomorph | a local population or group whose appearance is determined by ecological factors |
unstable atmosphere | Condition in the atmosphere where isolated air parcels have a tendency to rise |
rfu | Relative fluorescence units; a unit of fluorescence intensity measured by a real-time PCR detection system. |
cod end | the terminal, closed end of a trawl net |
stratosphere | Atmospheric layer found at an average altitude of 11 to 50 kilometers above the Earth's surface |
conidium pl. conidia | A naked, asexual spore produced at the ends of hyphae in ascomycetes. |
biomass | The mass of material produced by living micoorganisms, plants, or animals. |
mean | a statistical measure of central tendency |
monaxon | a linear spicule in sponges; a single rod or ray with a pointed, hooked, or knobbed end |
transformation | The introduction of a fragment of DNA into a genome |
quaternary period | the second period of the Cenozoic era containing the Pleistocene epoch and the Holocene epoch, and dating from 1.8 million years to the present |
hematologist | A physician who specializes in blood disorders. |
range | the range of a set of numbers is the largest value in the set minus the smallest value in the set |
superorganism | an "organism" which consists of many organisms, such as coral or the Portuguese man-of-war (a superorganism appears to be one organism, but in fact is a number of colonial animals joined together); a social unit of animals where division of labor is highly specialized and where individuals are not able to survive by themselves for extended periods of time |
colloid | A substance that contains components in different phases (e.g., minute solid particles within a liquid). |
quadrat | a sampling unit used to measure the number of individuals within a specific area. |
riverine environment | an environment created along permanent and semi-permanent streams because of the increase in soil moisture |
frequency | the number of items occurring in a given category |
gallium scan | The patient is injected with radioactive gallium and scanned with a detection machine 2-5 days later. The gallium moves towards sources of inflammation/infection. Detailed information. |
lymphomas | A group of diseases of unknown cause, characterized by painless, progressive enlargement of the lymphoid tissue. |
bank/shelf | deepwater area extending offshore from the seaward edge of the fore reef to the beginning of the escarpment where the insular shelf drops off to the deep, oceanic water |
class interval | one of the ranges into which data in a frequency distribution table (or histogram) are binned |
coulter counter | an instrument that measures particle size distribution from the change in electrical conductivity as particles flow through a small opening |
law of stream lengths | Morphometric relationship observed in the cumulative size of stream segment lengths in stream channel branching |
formal metadata | metadata that follows an FGDC approved standard |
frequency distribution | a graphical, tabular, or mathematical representation of the manner in which the frequencies of a continuous or discrete random variable are distributed over the range of its possible value |
expedited review | Review of proposed research by the IRB chair or a designated voting member or group of voting members rather than by the entire IRB |
satellite | a small celestial body orbiting a larger one; a man-made object designed to orbit a celestial body; a subviral particle composed of a nucleic acid |
resolution | The ability of a microscope to distinguish objects separated by small distances. |
cyano- | a prefix denoting blue or dark blue |
retronym | a word or phrase created because an existing term that was once used alone needs to be distinguished from a term referring to a new development; a modification of an existing word occasioned by a discovery or a new concept; as Atlantic herring in contrast to Pacific herring, acoustic guitar in contrast to electric guitar or analog watch in contrast to digital watch |
chi-square distribution | The distribution of the sum of squares of a number n of normally distributed variables; written as . |
aldehyde | an organic molecule containing a -COH group |
overthrust fault | Fault produced by the fracturing of rock in a fold because of intense compression. |
kingdom | in taxonomy, the highest ranked category in the taxonomic hierarchy |
irb | Institutional Review Board, the institutional committee charged with reviewing research proposals to ensure that important rights and protections are afforded to persons participating in research. |
translocation | (1) An aberration in chromosome structure resulting from attachment of a chromosomal fragment to a nonhomologous chromosome |
gait dysfunction | See postural instability |
unilineal relationship | Collaterals are unilineally related when they are only connected through a single parent of one or both of them |
intersexual | involving both sexes, male and female |
exosphere | The outermost zone in the Earth's atmosphere |
at | see ataxia telangiectasia. |
nondegradable pollutant | a polluting substance that is not broken down by natural processes |
front | a boundary or transition zone between two air or water masses of different properties |
atrous | jet black color |
red algae | red algae belong to the Division Rhodophycota |
dot grid | a technique used to analyze a photograph of a quadrat (photo-quadrat), in which a grid of random dots is placed over an image of the photo-quadrat |
dredge | a metal collar with an attached collecting bag that is dragged along the bottom to obtain samples of rock, sediment, or benthic organisms |
sex chromosomes | The pair of chromosomes responsible for determining the sex of an individual. |
distance matrix | A table showing the evolutionary distance between sets of operational taxonomic units (e.g., species or genes). |
mortality rate | Proportion of individuals that die in a specific age class |
chromosome | The DNA in a cell is divided into structures called chromosomes |
countercurrent exchange | The opposite flow of adjacent fluids that maximizes transfer rates; for example, blood in the gills flows in the opposite direction in which water passes over the gills, maximizing oxygen uptake and carbon dioxide loss. |
macroinvertebrate | an invertebrate having a body length greater than 2 mm |
flux | the rate of flow of energy or particles across a given surface |
verhulst's law | although individuals may benefit from the presence of conspecifics, population growth cannot go on forever without negative consequences. Eventually, an upper boundary is reached beyond which population density cannot increase |
gmp | Good Manufacturing Practice defines quality standards set by the US Food and Drug Administration (USFDA) for the production of materials used in the clinical setting. |
pinocytosis | A type of endocytosis in which the cell ingests extracellular fluid and its dissolved solutes. |
geostationary orbit | Satellite that has an orbit that keeps it over the same point on the Earth at all times |
biotic potential | Maximum rate that a population of a given species can increase in size (number of individuals) when there are no limits on growth rate. |
manzamine a | a marine pharmaceutical, extracted from the marine sponge Xestospongia ashmorica, possessing anti-inflammatory, antimalarial, antifungal, and anti-HIV-1 activity |
recombineering | A term coined by Don Court to describe a method for vector construction based on homologous recombination in E |
tidal range | the difference in water level between successive high and low tides |
parallel computing | A computer programming model for distributing data processing across multiple processors, so that multiple tasks can be carried out simultaneously. |
seine | a fish net that hangs vertically, with floats at the top and weights at the bottom |
silcretes | Sedimentary rock created by the chemical precipitation of silica. |
anode | The positive electrode of an electrophoretic system toward which anions migrate. |
volcano | An elevated area of land created from the release of lava and ejection of ash and rock fragments from and volcanic vent. |
total column ozone | A measurement of ozone concentration in the atmosphere. |
basal ganglia | A region deep within the brain consisting of large clusters of neurons responsible for voluntary movements such as walking and movement coordination |
gill raker | one of a series of knob- or comb-like projections on the front edge of the gill arch |
allozyme | One of several variant forms of an enzyme coded by alternative alleles at a single genetic locus. |
glacial uplift | Upward movement of the Earth's crust following isostatic depression from the weight of the continental glaciers. |
ve | See environmental variance. |
stereogastrula | a solid gastrula, lacking a gastrocoel |
mitigation plan | a proposal to reduce or alleviate potentially harmful impacts |
tubicolous | inhabiting a tube or tubular structure; tube dwelling, such as some marine polychaete worms |
seepage lake | A lake that gets its water primarily from the seepage of groundwater. |
degree heating week accumulation | accumulated thermal stress that coral reefs experience over a typical 12-week period |
hybrid underwater vehicle | an underwater vehicle designed to help marine scientists with many research needs using a single tool which can operate as an autonomous underwater vehicle (AUV) or as a tethered remotely operated vehicle (ROV) during a research cruise, depending on mission needs |
multivariate community analyses | statistical methods for analyzing physical and biological community data using multiple variables |
c horizon | Soil horizon normally found below the B horizon and above the R horizon |
porphyrin | A complex planar structure containing four substituted pyrroles covalently joined in a ring and frequently containing a central metal atom |
u | Uptake |
nonlinear equation | An equation that is not linear. |
plankton | Mostly microscopic organisms that drift passively or swim weakly near the surface of oceans, ponds, and lakes. |
heterotypic school | a well-defined group or school of several kinds of fishes |
erosion | The removal of weathered sediment or rocks by the forces of wind, water, and ice. |
papilliform | slender, elongate and pointed |
coefficient of relationship | Denotes the proportion of genes that are held in common by two individuals as a result of direct or Collateral relationship. |
unorganized territory | an unincorporated United States insular area for which the United States Congress has not enacted an organic act |
genetic correlation | A correlation between the breeding values for different traits |
cbc | Complete blood count - see Blood Count. |
allelomimetic behavior | behavioral activities that have strong components of social facilitation, imitation, and group coordination; imitation of behavioral habits of another animal, usually of the same species; behavior in social animals in which each animal does the same thing as those nearby |
mermaid's purse | an egg case of a shark or ray, usually oblong in shape with horns or tendrils |
discoid | /DISK-oid/ adj |
fungus | One of the achlorophyllous thallophytes whose somatic structures are usually filamentous and branched |
lagoon | a warm, shallow, quiet waterway separated from the open sea by a reef crest |
dhap | Dihydroxyacetone phosphate. |
gene dosage | The number of times a gene occurs within a genome. |
allele | One of two or more forms of a gene. Different alleles can result in different phenotypic traits. |
biocoenose | an assemblage of diverse organisms inhabiting a common biotope |
probability distribution | A distribution that specifies the chance of every possible outcome; it may be discrete or continuous. |
macrosmatic | pertains to animals with a well developed olfactory (smell) sense |
ergo | therefore; hence |
acid | a substance that increases the hydrogen ion concentration in a solution |
precambrian | All geologic time prior to the Cambrian Period. |
submerged cultural resource | an historical ship, aircraft, or other cultural artifact that has come to rest on the ocean bottom |
impact | a change, caused by external sources, in the chemical, physical (including habitat) or biological quality or condition of a habitat or environment |
diapause | a state of arrested development or growth, accompanied by greatly decreased metabolism |
kyoto protocol | an agreement made under the United Nations Framework Convention on Climate Change (UNFCCC) |
query form | As used in ZFIN, a Query Form is a web page allowing users to retrieve information from the ZFIN database. |
eutrophication | The dying off of organisms in a lake or pond due to an overabundance of algae which consume all of the dissolved oxygen in the water |
disulfide bond | a chemical bond between the sulfur atoms of two different amino acids in a protein |
electromagnetic spectrum | The entire spectrum of radiation ranging in wavelength from less than a nanometer to more than a kilometer. |
trophic | related to or functioning in nutrition |
mesoscale convective complex | A cluster of thunderstorms covering an area of 100,000 kilometers or more |
floodplain | Relatively flat area found alongside the stream channel that is prone to flooding and receives alluvium deposits from these inundation events. |
mutation rate | Characteristic rate for which one allele mutates to an alternate form. |
fluorescence | Light of a specific range of wavelengths that is emitted from a molecule previously excited by energy of a different range of wavelengths |
protocol | The formal design or plan of an experiment or research activity; specifically, the plan submitted to an IRB for review and to an agency for research support |
home range | the area over which an animal normally travels in its daily activities |
transcribed | to make |
cell | A cell is the basic unit of life in all organisms which can reproduce itself |
cold desert | Desert found in the high latitudes and at high altitudes where precipitation is low |
lowland | a general term for low-lying land or an extensive region of relatively low relief; usually applied to coastal regions that do not rise high above sea level |
rheotaxis | orientation to water currents |
anemometer | an instrument for measuring wind velocity |
xiphoid | sword-shaped; also called "xiphiform" |
sensor | a device that receives electromagnetic radiation and converts it into a signal that can be recorded and displayed as numerical data or as an image |
vernal equinox | One of two days during the year when the declination of the Sun is at the equator |
protista | Group, at the kingdom level, in the classification of life |
exif format | EXIF stands for Exchangeable Image File Format, and is a standard for storing interchange information in image files, especially those using JPEG compression |
heterogametic sex | The sex that has differently shaped sex chromosomes |
mineralization | Decomposition of organic matter into its inorganic elemental components. |
avicularium | a small bryozoan heterozooid in which the zooecium and operculum form a beak-like, snapping structure that deters small predators |
sponges | Common name for members of the phylum Porifera, which are thought to be the earliest branching lineage of animals |
visualization tool | a method of visually displaying data, such as a visualization theater, computer display, and map and chart |
colloidal gold | Fine particles of gold (on the order of 5-20 nm diameter) that can be coupled to antibodies or other proteins, allowing the detection of the binding of the labeled proteins by electron microscopy. |
median | The middle value in a set of numbers ordered in value from smallest to largest |
outcrop | an exposure of bedrock that can be seen on the surface, i.e., that is not covered by soil or water |
interstitial fluid | Extracellular fluid. |
intensity | pertaining to sound, the average amount of sound power (sound energy per unit time) which is transmitted through a unit area in a specified direction |
underdominance | Describes heterozygotes that have lower trait values (usually lower fitness) than either homozygote. |
flower | The reproductive structure of an angiosperm. |
nanometer | a unit of length equal to 0.001 microns (one thousandth of a micron), 0.000001 millimeters, or 0.000000001 meters; also called a millimicron |
neuron | a nerve cell; a specialized cell that can react to stimuli and transmit impulses |
incomplete flower | A flower lacking sepals, petals, stamens, or carpels. |
trauma | Injury; wound |
aureate | golden yellow in color |
florida current | the segment of current between the Gulf of Mexico Loop Current and the Gulf Stream, from the Dry Tortugas to the southeastern tip of Florida, and confined by the 250 meter and 500 meter isobaths |
parameters | Quantities such as selection coefficients or recombination rates that determine the behavior of a model but do not evolve with it |
artesian water | groundwater confined in an aquifer and under pressure great enough to cause the water to rise above the top of the aquifer when it is tapped by a well |
bioerosion | erosion of the physical/geological environment by organism activities such as boring, scraping, etching, etc. |
barchan dune | Crescent shaped sand dune that has its long axis transverse to the wind and its crescent tips pointed downwind. |
taphonomy | the study of everything that happens to an organism's body after it dies; includes probable cause and manner of death, movement of the body, chemical and physical alteration, burial, decomposition, diagenesis and fossilization |
dilation | Expansion or stretching |
emulsion | a suspension of small globules of one liquid in a second liquid with which the first will not mix |
amplification | an increase in the number of copies of a specific DNA fragment. |
crater | Circular depression in the ground surface created by volcanic activity or asteroid impact. |
deciduous teeth | The first set of teeth, which are replaced during growth by permanent teeth. |
random primed synthesis | a method for producing radioactive copies of a DNA clone |
patrilateral | The paternal or father's side of the family |
pathogenicity | the quality of producing or having the ability to produce pathologic changes or disease |
structured coalescent | An extension to the coalescent process in which lineages move from place to place as they trace backward in time while they coalesce. |
uvelloid | resembling a small cluster of grapes |
durable power of attorney | The legal designation of a person responsible for managing another person's affairs if he/she becomes unable to do so |
echiura | an animal phylum that contains the echiurans or spoonworms |
science fiction | When people dream or write about what could be in the world of science, they call it science fiction |
senescence | the aging process in mature individuals; the period near the end of an organism's life cycle |
antibody | A protein, produced in response to a foreign substance in the immune system. |
river | A long narrow channel of water that flows as a function of gravity and elevation across the Earth's surface |
gene | Originally defined as the physical unit of heredity but the meaning has changed with increasing knowledge |
deductive reasoning | an inference in which the conclusion about particulars follows necessarily from general theory |
watershed | an area of land that drains downslope to the lowest point |
intellectual property | intangible assets such as patents, trade secrets, trade names, etc. |
tautomer | One of a set of possible alternative structures. |
true north | Direction of the North Pole from an observer on the Earth. |
depth contour | a line on a nautical chart connecting points of equal depth |
pisciform | fish-shaped |
asymmetric carbon | A carbon atom covalently bonded to four different atoms or groups of atoms. |
dna typing | The analysis of sections of DNA for purposes of identification. |
centimorgan | A measure of the frequency of genetic recombination |
ccc | An abbreviation for "circular, covalently closed" DNA molecules. |
false-discovery rate | The expected proportion of rejected null hypotheses that are false positives |
transformation | Process by which genes are transferred from one bacterial strain to another in the form of soluble fragments of DNA. |
clinical trials | Organized medical studies that test the effectiveness of various treatments, such as drugs or surgery, in human beings. |
locus | A specific place along the length of a chromosome where a given gene is located. |
grade | The speed at which a type of Non-Hodgkin's develops |
photometry | the quantitative measurement of visible radiation, primarily intensity (brightness), from light sources |
bedrock | Rock at or near (beneath soil and regolith) the Earth's surface that is solid and relatively unweathered. |
nucleus | the cell structure that houses the chromosomes. |
hla | see Human Leukocyte Antigen |
earth albedo | Is the reflectivity of the Earth's atmosphere and surface combined |
sun | Luminous star around which the Earth and other planets revolve around |
pruritus | Itching |
national monument | a protected area of the United States that is similar to a U.S |
lappet | a sensory structure in some jellyfish (Scyphozoa), associated with a rhopalium, which responds to touch (pressure); a fleshy lobe |
vertigo | Dizziness; light-headedness |
prisoner’s dilemma | A game in which both players have a lower fitness when they play the ESS than when they both play the alternative. |
brood pouch | a sac-like cavity in the parent's body in which eggs are deposited and fertilized and larvae develop, such as in seahorses; marsupium; brood chamber |
consequences | Result or effects |
notopodium | a lobe of the parapodium closer to the dorsal side in polychaete worms |
social darwinism | The idea that, by analogy with natural selection, societies evolve through competition between individuals or groups. |
threatened species | A species that is considered likely to become endangered in the foreseeable future. |
central limit theorem | A theorem that states that the sum of a large number of independent variables tends toward a normal distribution. |
buoy | a floating platform for navigational purposes or supporting scientific instruments that measure environmental conditions |
nhgri | National Human Genome Research Institute. |
algorithm | A series of steps defining a procedure or formula for solving a problem, that can be coded into a programming language and executed |
microscope | An instrument consisting essentially of a tube 160 mm long, with an objective lens at the distant end and an eyepiece at the near end |
black body | Is a body that emits electromagnetic radiation, at any temperature, at the maximum possible rate per unit surface area |
o | Obviate |
suspended load | Portion of the stream load that is carried almost permanently suspended in flowing water. |
metanephridium | In annelid worms, a type of excretory tubule with internal openings called nephrostomes that collect body fluids and external openings called nephridiopores. |
photon | A quantum, or discrete amount, of light energy. |
restriction point | A regulatory point in animal cell cycles that occurs late in G1 |
growth inhibitor | Any substance inhibiting the growth of an organism |
clinical trials | Research studies that involve patients |
mirna | a category of novel, very short, non-coding RNAs, generated by the cleavage of larger precursors (pri-miRNA) |
colonial | Condition in which many unicellular organisms live together in a somewhat coordinated group |
versus | against; in contrast to |
radioisotope dating | See radiometric dating. |
membrane potential | The charge difference between the cytoplasm and extracellular fluid in all cells, due to the differential distribution of ions |
biological navigation | the ability of certain animals to navigate by instinct to specific sites |
minimal risk | When the probability and magnitude of harm or discomfort anticipated in the proposed research is not greater (in and of themselves) than those ordinarily encountered in daily life |
gradient | In a thermal cycler, a controlled, incremental temperature differential across a reaction block. |
elicitor | A molecule that induces a broad type of host defense response. |
dolichol | n |
epidural | A type of local anesthesia to decrease or eliminate pain |
dendrite | a sensory branch of a neuron that carries a nervous inpulse to the cell body |
wastewater | water that is a mixture of water and dissolved or suspended solids carrying wastes from homes, businesses and industries |
noncompetitive inhibitor | An inhibitor of enzyme activity whose effect is not reversed by increasing the concentration of substrate molecule. |
replicative dna transposon | A DNA-based transposable element that moves itself to a new place in the genome and also leaves a copy in the original location. |
plication | a fold |
eccentricity | Geometric shape of the Earth's orbit |
taeniform | ribbon-like; elongate, compressed and deep-bodied |
chemical bond | An attraction between two atoms, resulting from a sharing of outer-shell electrons or the presence of opposite charges on the atoms |
ferruginous | rust color |
chromosome | A structure that carries the heriditary information for an organism and consists of a long DNA molecule with associated proteins. |
outrigger | a floatation device attached to one or both sides of the hull of a boat to help prevent a capsize |
preclinical trial | Refers to the testing of experimental drugs in the test tube or in animals - the testing that occurs before trials in humans may be carried out. |
relief | the difference in elevation between the high and low points of a land surface; changes in terrain; elevations or depressions in the land |
snout | the portion of the head that is just anterior to the eyes |
electromagnetic spectrum | The entire spectrum of radiation; ranges in wavelength from less than a nanometer to more than a kilometer. |
ftp | File Transfer Protocol |
desiccated | /DEH-sick-kate-əd/ adj |
hydrophobic | refers to molecules that do not interact with water and are not soluble in water |
cancroid | resembling a crab |
tawny | brownish yellow color |
hawser | a large rope for mooring or towing a ship |
calice relief | the height of a corallite or corallite series |
evagination | protrusion of some part or organ from its normal position; the act of turning inside out; an outgrowth or protruded part |
directional selection | a type of natural selection that removes individuals from one end of a phenotypic distribution and thus causes a shift in the distribution |
gamma ray | an electromagnetic wave or photon emitted from the nucleus |
tabula | a horizontal partition (or floor) dividing the corallite skeleton; one in a series of horizontal plates traversing a coral with a massive calcareous skeleton |
smooth | describes a surface without projections; glabrous |
sonograph | a hard copy display of sound data generated either in real time or from recorded data |
midpoint rooting | A method of rooting a phylogenetic tree in which the root is placed at the center of a branch connecting the pair of operational taxonomic units that are most distant from each other. |
edema | Increased fluid in the tissues; swelling; puffiness |
similarity | 1 |
gene amplification | The selective production of multiple gene copies without a proportional increase in others. |
spatial index | the ratio of reef surface contour to linear distance |
base | A substance that reduces the hydrogen ion concentration in a solution |
visible light | That portion of the electromagnetic spectrum detected as various colors by the human eye, ranging in wavelength from about 380 nm to about 750 nm. |
austral | relating to or coming from the south; of the south temperate region, between the antarctic and tropical regions |
open sea | that part of the ocean that extends outward from the continental shelf |
caruncle | see: canthus. |
circumpolar | Surrounding a terrestrial pole |
fishery management council | a regional, quasi-governmental group with authority to manage fisheries in federal waters, generally from three to 200 miles offshore |
ep | See early pressure. |
mjo | a major perturbation of tropical convection which moves and completes a global circuit every 30 to 60 days |
phylogenetic anchor | The use of the phylogeny of a gene to infer the organismal source of a small piece of DNA |
idl | a commercial array-oriented language with numerical analysis and display features, first released in 1977 |
tidal delta | a delta formed at both sides of a tidal inlet |
geochemistry | the study of the chemical elements, their isotopes, and related processes with respect to the abundance and distribution of materials within the Earth's waters, crust, and atmosphere |
periodic table | Table that describes some of the chemical properties of the known elements. |
lineage | a genetically continuous line of evolutionary descent |
synoptic scale | Scale of geographic coverage used on daily weather maps to describe large scale atmospheric phenomenon (for example, mid-latitude cyclone, air masses, fronts, and hurricanes). |
signal saturation | Signal saturation is an optical effect that occurs when some pixel values for highly expressed genes or proteins exceed the upper detection threshold of the scanner software (216 – 1 = 65, 535 for 16-bit images). |
organ-pipe coral | the organ-pipe coral, Tubipora musica, is a reef-building (hermatypic) octocoral |
reef front | a synonym of reef slope |
polycarpic | refers to plants that have repeated periods of reproduction; iteroparous |
perisarc | the chitinous outer coat of common tissue connecting individuals in some colonial hydrozoans |
proxy data | Data that measures the cause and effect relationship between two variables indirectly. |
coulombmeter | an instrument for measuring electric charge |
lunate | crescent-shaped |
knob | a circular, rounded projection or protuberance that sticks out from a surface; a projecting structure on the reef margin or reef front wherein the upper surface flares outward, giving the surface a greater diameter then the basal section |
nonredundant database | A database in which redundant entries have been noted and merged. |
via | By |
bicornate | having two horns or horn-shaped structures |
vertical classification | classification which stresses common descent and tends to unite ancestral and descendant groups of a phyletic line in a single higher taxon, separating them from contemporaneous taxa having reached a similar grade of evolutionary change |
tide gauge | a device for measuring the height (rise and fall) of the tide; especially an instrument for automatically making a continuous graphic record of tide height versus time |
neuron | A nerve cell that receives and conducts electrical impulses from the brain. |
centimorgan | A distance on the genetic map that corresponds to a 1% recombination rate |
platform | Horizontal sedimentary deposits found on top of continental shield deposits. |
morgan | see: centimorgan. |
resonator | a structure that fills with sound and acts as a natural amplifier |
vermilion | bright red color |
abient | avoiding or turning away from a source of stimulation |
collinear | lying on the same line |
compensation | Payment or medical care provided to subjects injured in research |
ultrasonic | sound waves that have frequencies higher than what humans can hear, usually greater than 20,000 Hz |
specific heat | Is the heat capacity of a unit mass of a substance or heat needed to raise the temperature of 1 gram (g) of a substance 1 degree Celsius. |
integrated ecosystem assessment | a critical tool to enable NOAA's ecosystem approach to management |
radarsat | Satellite program established by the Canadian Space Agency for the purpose of remotely sensing the Earth's resources |
dehiscence | The opening of an anther, fruit, or other structure to permit the escape of reproductive bodies. |
scientific advisory board | a group of esteemed scientists and business professionals, independent from management that provides objective feedback and guidance on a company's progress and goals. |
ocean.us | Ocean.US, the National Office for Integrated and Sustained Ocean Observations, was established by the Congressionally-created National Oceanographic Partnership Program (NOPP) |
lake | A body standing water found on the Earth's continental land masses |
elastic | capable of returning to an initial form or shape after deformation; resilient |
egg case | the leathery case which contains the developing embryo in hagfishes, sharks, rays, skates and chimaeras; also called a "mermaid's purse" |
vas deferens | a duct that carries spermatozoa away from a testis |
photogrammetry | The science of using aerial photographs and other remote sensing imagery to obtain measurements of natural and human-made features on the Earth. |
semipermeable membrane | a thin membranous barrier that permits passage of particles up to a certain size or of a special nature; also referred to as a 'differentially permeable membrane' |
race | a distinguishable group of organisms of a particular species that is geographically, ecologically, physiologically, physically, and/or genetically distinct from other members of the species |
easting | First measurement of a grid reference used to specific the location of a point on a rectangular coordinate system |
cdna | complementary DNA to a particular RNA fragment. |
parent | 1 |
ocean trench | Deep depression found at the edge of the ocean floor |
interphase | the period of cell growth between divisions. |
hereditary | The transfer of a gene from parent to child |
dip | One of the directional properties of a geologic structure such as a fold or a fault |
dendrite | A branching process of a neuron that transmits impulses to the body of the neuron. |
bulbous | a rounded or swollen shape |
back reef | the shoreward side of a reef, including the area and sediments between the reefcrest/algal ridge and the land |
holocene epoch | an epoch of the Quaternary period dating from the end of the Pleistocene approximately 8,000 years ago until the present |
risk | Used as a term for a danger that arises unpredictably, such as being struck by a car. |
arthropathy | joint disease |
sulfate aerosol | Type of solid compound commonly found in the atmosphere |
sickle cell anemia | an hereditary, chronic form of hemolytic anemia characterized by breakdown of the red blood cells; red blood cells undergo a reversible alteration in shape when the oxygen tension of the plasma falls slightly and a sickle-like shape forms. |
least squares | a statistical criterion for the estimation of the goodness of fit in correlation analysis |
precautionary approach | measures intended to reduce risk to a biological resource and its environment |
doc | a measure of the organic compounds that are dissolved in water |
in situ data | measurements made at the actual location of the object or material measured, in contrast to remote sensing |
classification | a system of nested hierarchical categories used to efficiently store information about biological diversity |
archaebacteria | an ancient group of prokaryotes, over 3.5 billion years old; sometimes this group is placed into a separate kingdom, the Archaea |
geothermal vent | a submerged feature consisting of a vent of hot, mineral-rich waters on the ocean floor; geothermal vents are generally located on or near spreading oceanic ridges or on the continental margins of subduction trenches |
mhc | Abbreviation of major histocompatibility complex. |
incidence | Number of times something happens |
allozymes | Enzymes differing in electrophoretic mobility as a result of allelic differences at a single gene (cf |
effort | the amount of time and fishing power used to harvest fish |
authority | in taxonomy, the name of the author of a taxonomic name, cited after the name |
diffused solar radiation | Solar radiation received by the Earth's atmosphere or surface that has been modified by atmospheric scattering. |
fluid | Substance, gas or liquid, that has the property of flow. |
nomograph | A graph that allows a third variable to be measured when the values of two related variables are known. |
cryptogenic | of obscure or unknown origin |
parathyroid gland | Any o{ {our smarr encfocrine glands, embedded in the surface of the thyroid gland, that secrete parathyroid hormone |
target joint | A particular joint that has experienced repeated bleeds or at least four bleeds into one joint within a six month period. |
longshore transport | The transport of sediment in water parallel to a shoreline. |
lyon hypothesis | see sex chromatin. |
la niña | a phenomenon characterized by unusually cold ocean temperatures in the eastern Equatorial Pacific, compared to El Niño, which is characterized by unusually warm ocean temperatures in the eastern Equatorial Pacific |
postzygotic isolation | Reproductive isolation that acts after production of a hybrid zygote through hybrid inviability or sterility. |
turbulent flow | Movement of water within a stream that occurs as discrete eddies and vortices |
pedigree | a diagram representing family relationships of individuals. |
dysequilibrium | Unsteadiness or balance problems |
nuclear energy | Energy released when the nucleus of an atom experiences a nuclear reaction like the spontaneous emission of radioactivity, nuclear fission, or nuclear fusion. |
neuroscience | the scientific disciplines concerned with the development, structure, function, chemistry, pharmacology, clinical assessments and pathology of the nervous system |
branchial cleft | a gill slit, such as is found in sharks, skates, and rays |
fisherman | a person, male or female, who harvests fishes or shellfish |
cycad | Any member of a group of seed plants with somewhat cone- or leaf-like reproductive organs and leaves that superficially resemble those of some palms |
fringing reef | a shelf reef that grows close to shore |
microfilament | A solid rod of actin protein in the cytoplasm of almost all eukaryotic cells, making up part of the cytoskeleton and acting alone or with myosin to cause cell contraction. |
skerry | a low-lying rocky island or reef, often without terrestrial vegetation, and frequently swept by waves |
sill reef | a synonym of ribbon reef |
stamen | The part of the flower producing pollen, composed of an anther and filament. |
d | Data Cleaning |
stipule | One of a pair of appendages at the base of the leaf stalk. |
long line fishing | a commercial fishing method which uses hundreds to thousands of baited hooks hanging from a single line, which may be kilometers in length |
bird | Group of warm blooded vertebrate animals whose body is covered with feathers. |
ochre | yellowish or yellow-brown color |
circumesophageal commissure | the major commissure (junction) of the nervous system of many invertebrates to which are connected anteriorly and posteriorly directed nerves and nerve chords |
indigenous | native to a particular country or area |
frictional drag | the molecular (viscous) retarding force on an object, such as air, as it moves across the earth's surface |
inbred | Produced by mating between relatives. |
pluripotent | Capable of developing into a considerable range of different cell types |
weather | temperature, precipitation, and wind speed and direction that occur on a daily basis |
gene complex | A number of apparently functionally or evolutionarily related loci that are genetically closely linked |
seston | minute particulate material moving in water that is composed of both living organisms, such as plankton, and non-living matter such as plant debris and suspended soil particles |
coastal waterway | a body of water situated on or near a coast, with some association with the ocean |
gracile | Graceful, slender, and delicate |
dextrorotatory | /decks-troh-ROTE-tə-tore-ee/ adj |
holocene epoch | Period of time from about 10,000 years ago to today |
blood-brain barrier | A specialized capillary arrangement in the brain that restricts the passage of most substances into the brain, thereby preventing dramatic fluctuations in the brain's environment. |
genetic background | The set of genes with which a gene of interest is associated |
ocean acidification | the decrease in the ocean's pH and the resulting increase in acidity as the oceans absorb carbon dioxide released into the atmosphere by human activities |
mya | an acronym for "million years ago" |
dominant lethal | See lethal. |
multifactorial disease | Polygenic disease, i.e |
zoanthina | an oval larval form of Zoanthidea with a girdle of long cilia near the oral pole |
darwin point | the latitude at which reef growth just equals reef destruction by various physical forces |
tissue | a group of interconnected cells forming a structure or performing a particular function in a multicellular organism. |
hydrogen bond | a relatively weak chemical bond consisting of a hydrogen atom between two electronegative atoms (e.g., oxygen or nitrogen), with one side being a covalent bond and the other being an ionic bond |
pixel | abbreviation of picture element |
transmissometer | an instrument for measuring transmission of light through a fluid |
fluorescence | the emission of light from a substance caused by exposure to radiation from an external source |
oligopotency | A degree of differentiation that is less than multipotent and describes progenitor cells capable of forming a small set of differentiated cell types. |
thermal high | Area of high pressure in the atmosphere caused by the area having warmer temperatures relative to the air around it. |
erosion | the wearing away of the land surface naturally by wind or water, but is often intensified by human's land-clearing practices |
polypoid | polyp-shaped |
cation | An ion with a positive charge. |
elevator pitch | a short, typically less than two-minute, summary used to quickly describe a business to investors |
hydrocaulus | the main stem of a colonial hydrozoan which consists of a cylindrical tube of living tissue (coenosarc) covered by a thin outer membrane (perisarc) |
bond energy | The quantity of energy that must be absorbed to break a particular kind of chemical bond; equal to the quantity of energy the bond releases when it forms. |
ontology | The creation of a systematically ordered data structure that enhances exchange of information between computers and scientists |
halo | in animal coloration, a circle of color around a spot of another color |
cytoskeleton | The filamentous skeleton, formed in the eukaryotic cytoplasm, that is largely responsible for controlling cell shape. |
dysmorphology | Comes from the Greek DYS - meaning abnormal, disease, faulty, impaired and MORPHOLOGY - meaning structure or form |
antagonistic pleiotropy | The case in which a single loci has multiple effects, some advantageous and some deleterious; for example, when a gene causes higher fitness early in life, but decreased fitness at older ages. |
epipelic | living on or in fine sediments, such as mud or sand |
falculate | a shape that is curved and sharp-pointed, like a claw |
aciculate | needle-like or having needle-like parts |
all-or-none law | an action that occurs either completely or not at all, such as the generation of an action potential by a neuron, or the contraction of a muscle cell |
gene therapy | Treatment that consists of introducing into a patient a normal copy of one or more defective genes |
just-so stories | Untestable explanations for adaptations. |
nitrogen | NĪ-trə-jen/ Chemical element; atomic number 7, atomic mass 14.00674; colorless, odorless, tasteless; makes up 78% of earth's atmosphere by volume |
strike-slip fault | Fault that primarily displays horizontal displacement. |
idiosyncrasy | specific (and usually unexplained) reaction of an individual to e.g |
decompression dive | any dive where the scuba diver is exposed to a higher pressure than when the dive began |
dendrogram | A phylogenetic tree in which the branch lengths are constrained to all be equidistant from the root; also known as an ultrameric tree. |
waterspout | A vortex of rapidly moving air over water that is associated with some thunderstorms. |
marine snow | dense concentrations of particulate organic detritus and living organisms whose downward drift appears similar to a snowfall |
standard atmospheric pressure | A pressure of 101.32 kilopascals or 1013.2 millibars. |
spinate | spine-like or composed of spines |
shape file | a set of files that contain a set of points, arcs, or polygons (or features) that hold tabular data and a spatial location |
belau | traditional (native) name for Palau (Republic of Palau) |
mass spectrometer | An instrument that determines the exact mass of charged particles or ions by measuring the flight path through a set of magnetic and electric fields |
position-specific weight matrix | (PWM) |
dalton's law | the total pressure exerted by a mixture of gases is the sum of the pressures that would be exerted by each of the gases if it alone were present and occupied the total volume |
radii | inconspicuous septal elements which connect septa with the columella |
ion-exchange resin | A polymeric resinous substance, usually in bead form, that contains fixed groups with positive or negative charge |
chromomere | One of the serially aligned beads or granules of a eukaryotic chromosome, resulting from local coiling of a continuous DNA thread. |
hydrolysis | A chemical process that lyses, or splits, molecules by the addition of water. |
dry weight | the moisture-free weight of a biological sample obtained by drying at high (oven-drying) or low (freeze-drying) temperatures for an time sufficient to remove all water |
signature sound | a unique sound that is associated with a specific sound source |
excitotoxicity | Overstimulation of nerve cells by nerve impulses |
entropy | A quantitative measure of disorder |
photosynthesis | The process by which cells harness energy from sunlight and synthesize glucose from CO2 and water. |
necromass | the weight of dead organisms, usually expressed per volume of water or per unit of land surface or volume |
relapse | Return or reappearance of a disease |
juxtaposed | placed near together |
re-entrants | A prominent indentation in an escarpment, ridge or shoreline. |
hermatypic coral | a reef-building coral with zooxanthellae in its tissues |
phenotype | The outward appearance of the individual |
anther | Structure which produces and releases pollen. |
green revolution | Name given by William Goud to the dramatic increase in crop productivity during the third quarter of the 20th century, as result of integrated advances in genetics and plant breeding, agronomy, and pest and disease control. |
maillist | a system that allows people to send e-mail to one address, whereupon their message is copied and sent to all of the other subscribers to the maillist |
ova | Meiosis involves two divisions and results in four daughter cells, each containing only half the original number of chromosomes--23 in the case of humans. |
mean | The mean of sample is calculated by taking the sum of all data values and dividing by the total number of data values. |
epicotyl | In an angiosperm embryo, the embryonic axis above the point of attachment of the cotyledon(s). |
tunic | the outer covering of a tunicate (Urochordata) |
ngo | a non-profit group or association organized outside of institutionalized political structures to obtain particular social objectives (such as environmental protection) or serve particular constituencies |
aground | touching, resting or lodged on the bottom of shallow water |
sol | a liquid colloidal dispersion; a cytoplasmic phase (the other phase is a gel) |
calorimetry | measurement of the amounts of heat absorbed or given out; measurement of heat flow |
bulliform | blister or boil-shaped |
allele | alternative form of a gene, e.g |
blue ventures | a not-for-profit organization (UK) which facilitates projects and expeditions that enhance global marine conservation and research |
embryo sac | This is the mature female gametophyte |
syndrome | a recognizable pattern or group of multiple signs, symptoms or malformations that characterize a particular condition; syndromes are thought to arise from a common origin and result from more than one developmental error during fetal growth. |
display | in animal behavior, visual messages or body language, used by animals primarily to communicate anger, fear, and other basic emotions |
energy | The capacity to do work by moving matter against an opposing force. |
allele | Alternate form of a gene possessing a unique nucleotide sequence |
sill | Horizontal planes of igneous rock that run parallel to the grain of the original rock deposits.They form when magma enters and cools in bedding planes found within the crust |
primer | A structure that serves as a growing point for polymerization |
children | Parent |
mean high tide | the level to which the water rose on an average day over a previous period of time (years or decades); the average of all the high tides as calculated over a long period of time |
disjunct distribution | the discontinuous or separated geographical distribution of a species or other taxonomic unit |
contractile vacuole | A membranous sac that helps move excess water out of certain cells. |
asthenosphere | a layer of soft but solid, mobile rock comprising the lower part of the upper mantle from about 100 to 350 km beneath the Earth's surface |
battery | a group of nematocysts on the tentacles of hydras and some other hydroid polyps |
sporangium | A structure containing spores. |
verruca | a wart-like projection; a small cylindrical projection arising from the corallum that contain calices |
electron tomography | A method used to generate three-dimensional images by computer analysis of multiple two-dimensional images obtained by electron microscopy. |
tremor | Involuntary, uncontrollable, rhythmic movements (fast or slow) that may affect the hands, head, voice or other body parts |
robust | a large or heavily built body or body part |
symptomatic | 1 |
parsimony | the principle that the simplest explanation, the one that requires the fewest hypotheses, is the one most likely to be correct; same as Occam's Razor: the simplest of two competing theories is to be preferred |
co-management | the sharing of authority, responsibility, and benefits between government and local communities in the management of natural resources |
tetrasporophyte | diploid phase in the life cycle of red algae which produces haploid tetraspores.The tetrasporophyte is the site of meiosis, more specifically, the tetrasporangia where haploid tetraspores are produced |
deism | The view that God works through fixed laws of nature; that is, that events occur without supernatural intervention. |
sandflat | a flat expanse of sand on the coast or in an estuary |
caliculate | cup-shaped |
biogeography | The study of the past and present distribution of species. |
data cleaning | Computational processing to remove noise and artifacts from digital data prior to storage. |
stridulation | to produce a sound by rubbing two body parts together |
population density | Number of individuals of a particular species found in a specified area. |
spinal cord | Part of the vertebrate central nervous system; consists of a thick, dorsal, longitudinal bundle of nerve fibers extending posteriorly from the brain. |
odds ratio | A measure of relative risk or effect size that is usually estimated from case-control studies. |
petrochemical | a chemical derived from petroleum or natural gas |
antihelmintic | a chemical agent used to combat parasitic worms, such as roundworms and tape worms |
amino acid | A molecule containing both amino (-NH2) and carboxyl (-COOH) groups |
robustness | In regards to methods of analysis, a measure of how dependent a result is on the assumptions of the method being used to obtain the result. |
microatoll | a circular colonial corallum up to 1 m height and 4 m diameter |
feldspar | A group of common aluminum silicate minerals that contains potassium, sodium, or calcium. |
osmotic pressure | A measure of the tendency of a solution to take up water when separated from pure water by a selectively permeable membrane. |
loss-of-function mutation | Neomorphic Mutation |
complex | Containing multiple macromolecules in an organized structure |
diel | a 24-hour period that usually includes a day and its adjoining night; pertaining to the day-night cycle |
bed | Sedimentary structure that usually represents a layer of deposited sediment. |
rubble zone | the shallowest part of a reef crest landward of the palmata zone |
hypocotyl | In an angiosperm embryo, the embryonic axis below the point of attachment of the cotyledon(s) and above the radicle. |
relative humidity | The ratio between the actual amount of water vapor held in the atmosphere compared to the amount required for saturation |
municipal sewage | wastes (mostly liquid) originating from a community; may be composed of domestic wastewaters and/or industrial discharges |
entropy | A measure of the disordered, degraded energy that is unavailable for work. |
sulu-sulawesi seascape | an area of approximately 900,000 square kilometers (about 347,492 square miles) that includes the Sulu and Sulawesi Seas, in the national waters of three independent nations of the Southeast Asian Region: Indonesia, Malaysia, and the Philippines |
falcate | scythe-shaped |
stratigraphy | the branch of geology that deals with the origin, composition, distribution and succession of strata |
mimetics | Compounds that mimic the function of other molecules via their high degree of structural (conformational) similarity, and hence physio-chemical properties. |
physical geography | Field of knowledge that studies natural features and phenomena on the Earth from a spatial perspective |
cephalization | the localization of neural coordinating centers and sensory organs at the anterior end of the body |
biomass | The weight of living tissues usually measured per unit area over a particular time interval |
coefficient of determination | Statistic that measures the proportion of the variation in the dependent variable that is associated with the statistical regression of an independent variable |
controlled study | Research that involves at least two groups: one that receives the intervention being evaluated, and the other that receives either a placebo or another intervention |
accession number | The unique identifier assigned to new sequence information submitted to a major database. |
weight belt | a belt worn during scuba diving that contains lead weights, either solid masses or as shot in pouches |
first degree relative | A relative who is a person’s biological mother, father, full sibling, or child |
micrometer | A unit of measure in the metric system |
census | the enumeration of all the individuals in a population |
annular | ring-shaped |
pore space | openings between geologic material found underground; also referred to as void space or interstices |
meso- | a prefix meaning 'middle' |
molecular genetic testing | (synonyms: DNA testing, DNA-based testing, molecular testing) Testing that involves the analysis of DNA, either through linkage analysis, sequencing, or one of several methods of variant detection |
raita bank | one of several submerged banks in the Northwestern Hawaiian Islands |
vasculature | the network of blood vessels in an organ or body part; tissue consisting of cells joined to form tubes for transporting fluids through a body |
narrow-sense heritability | See heritability. |
polarity | A lack of symmetry |
lateral line system | a series of sense organs that detect pressure or vibrations along the heads and sides of cyclostomes, fishes, and some amphibians |
geoid | True shape of the Earth, which deviates from a perfect sphere because of a slight bulge at the equator. |
nucleus | The brain of the cell |
electron | A particle with a single negative charge; one or more electrons orbit the nucleus of the atom. |
hydrolysis | The cleavage of a molecule by the addition of water |
herpes viruses | Viruses which can affect the skin and central nervous system, includes Herpes simplex, Herpes zoster, and Cytomegalovirus. |
nectary | A gland that secretes a sweet fluid (nectar), commonly but not exclusively found in insect-pollinated flowers. |
structured population | See population structure. |
stock | Unit of an exploited species that is employed in stock assessment |
linkage | The association of genes (or genetic loci) on the same chromosome |
soil permeability | The rate at which water and air move vertically through a soil. |
generic drug | the version of an approved drug produced by a competitor after a pioneer firm's patents expires. |
heuristic algorithm | A programming strategy based on trial-and-error methods and feedback evaluation. |
ocean | A body of saline water found occupying all or part of the Earth's ocean basins |
wave crest | The curved tops or ridges of an oscillating wave. |
essential nutrient | A substance that an organism must absorb in preassembled form because it cannot be synthesized from any other material |
micelle | The structure formed by amphipathic molecules in solution that places the polar group toward the solution and the hydrophobic group toward the interior. |
merged feature | A chromosomal feature that was once annotated as a distinct entity, but that has now been subsumed by another feature |
inversion | An aberration in chromosome structure resulting from an error in meiosis or from mutagens; reattachment in a reverse orientation of a chromosomal fragment to the chromosome from which the fragment originated. |
gem | Genetically engineered micro-organism. |
respiratory tree | a respiratory organ of sea cucumbers (Holothuroidea-Echinodermata) |
continental shelf | Shallow submerged margin of the continents that lies between the edge of the shoreline and the continental slope |
morgan | The unit of distance on the genetic map |
spectrometer | an instrument for measuring wavelengths of light of a spectrum |
henry's law | the amount of gas that will dissolve in a liquid at a given temperature is almost directly proportional to the partial pressure of that gas |
bimodal curve | a frequency curve characterized by two peaks |
territoriality | the defense of a given area |
mitochondrial dysfunction | Mitochondria are the "power plants" of the cell, generating energy needed for cell activity |
photic zone | the vertical zone in the ocean extending from the surface to that depth permitting photosynthetic activity |
tissue | A group of similar cells that are organized into a structure with a specific purpose. |
hydrophobic interaction | A type of weak chemical bond formed when molecules that do not mix with water coalesce to exclude the water. |
gene therapy | Treatment that consists of introducing into a patient a normal copy of one or more defective genes responsible for the patient's disease |
parent | Sibling |
recombination rate | The proportion of recombinant gametes. |
buttress zone | the seaward-sloping area of a coral reef (just beneath the algal ridge) that consists of alternating ridges and furrows |
köppen climate classification | System that uses monthly precipitation and temperature data and total annual precipitation data to classify a location's climate into one of five main categories: Tropical Moist Climates; Dry Climates; Moist Mid-latitude Climates with Mild Winters; Moist Mid-Latitude Climates with Cold Winters; and Polar Climates |
jugular | pertaining to the throat area |
distribution | the area where a species is known to occur |
point intercept transect | a linear transect protocol where a tape is secured at each end of the transect with the tape draped over the reef in between |
morphology | the form or structure of an organism; anatomy. |
heat-shock protein | A member of a highly conserved group of chaperone proteins expressed in cells exposed to elevated temperatures or other forms of environmental stress. |
abyssal plain | the ocean bottom offshore from the continental margin , usually very flat with a slight slope |
test animal | an individual used for experimental research purposes |
cement | the chemically precipitated calcium carbonate present in spaces within skeletons or between grains of internal sediment |
conodont | Any member of a group of worm-like, vertebrate organisms common from the Ordovician to the Triassic |
chromosome | Structure composed of DNA and proteins representing the basic hereditary unit |
continuous variation | Variation where characters are divided by small differences in metric or quantitative values across a continuum, not by counts in broadly specified classifications such as coat colors. |
panmictic | Describes a population in which every individual has the same chance of mating with every other: in other words, where there is no population structure. |
average heterozygosity | The percent, on average, of a population's loci that are heterozygous in members of the population. |
syngamy | The union of two genomes, which leads to a doubling of ploidy level. |
angstrom | a unit of length equal to one ten-thousandth of a micron (10-4 micron) or 10-10 of a meter |
tetanus | The maximal, sustained contraction of a skeletal muscle, caused by a very fast frequency of action potentials elicited by continual stimulation. |
oceanic island | an island in the ocean formed by breaking away from a continental landmass, volcanic action, coral formation, or a combination of sources |
tau | the third charged lepton (in order of increasing mass), with electric charge -1 |
tki | (Tyrosine |
scientific method | The approach science uses to gain knowledge |
heterosphere | The upper layer in a two part classification of the atmosphere based on the general homogeneity of chemical composition |
pressure gradient | a graded change in the level of water or air pressure that occurs over distance |
limnology | the study of the physical, chemical, meteorological and biological aspects of fresh waters |
antiparkinsonian medication | A medicine used to treat Parkinson's disease. For more information see what patients on our Patient Council have to share on the topic of medication. |
apex | the tip, top, point, or angular summit of anything |
transpiration | The evaporative loss of water from a plant. |
centimorgan | A measure of distance between two genes based on the frequency with which they are inherited together |
monera | the Kingdom composed of prokaryotic organisms |
paliform lobe | an upright skeletal rod or plate at the inner margin of septa formed by upward growth of the septum |
chromosomal mutation | change in the number or structure of chromosomes in a cell. |
joint probability | the probability of two or more things occurring together |
precambrian | Span of geologic time that dates from 4.6 billion to 570 million years ago |
hydrocarbon seep | an area where hydrocarbons seep slowly from the sea floor |
pacific plate | the largest of the tectonic plates of the earth's crust |
spatial index | as pertaining to coral reef ecosystems, the ratio of reef surface contour distance to linear distance |
statistical analysis | the application of probability theory to quantified descriptive data |
velocity | The speed of movement of an object in one direction. |
nucleus | The structure in the center of each cell that holds chromosomes. |
actiniform | ray-like; star-shaped |
polymorphism | The coexistence of two or more distinct forms in the same population. |
carinate | shaped liked a keel or ridge |
natural logarithm | The logarithm (log) to base e where e ≈ 2.718 |
till plain | Extensive flat plain of till that forms when a sheet of ice becomes detached from the main body of the glacier and melts in place depositing the sediments it carried. |
polar nuclei | In angiosperms, the two nuclei of the central cell of the female gametophyte; they fuse with a sperm nucleus to form the triploid (3n) endosperm nucleus. |
dynamic optical demarcation | in animal behavior, a special signalling device used by an animal in a stereotypical movement, as for example, the waving of a fiddler crab's claw to attract the attention of other members of its species |
fret | Fluorescence resonance energy transfer |
patterned ground | Term used to describe a number of surface features found in periglacial environments |
extrinsic | not forming an essential part of a thing; arising or originating from the outside |
fishery stock | A group of individuals exploited in a particular area or by a specific method |
bedrock | the solid rock of the earth's crust that lies under the soil and other unconsolidated earth materials |
dichopatric | pertains to allopatric populations with non-contiguous ranges |
infiltration rate | Rate of absorption and downward movement of water into the soil layer. |
phenotype | Appearance; entirety of features resulting from interactions of genetic information |
color card | the CoralWatch program (University of Queensland, Brisbane, Australia) developed a method of coral health monitoring which uses simple color charts, like paint color matching charts |
thermocline | the region below the surface layer of the ocean or lake, where the temperature gradient increases abruptly (i.e |
spectrophotometer | An instrument that measures the proportions of light of different wavelengths absorbed and transmitted by a pigment solution. |
gastric pouch | in scyphozoans (jellyfish), one of four sacs is which food in digested |
axial corallite | a corallite which forms the tip of a branch |
exotic species | a non-native species that is introduced into an area; also referred to as alien or invasive species |
dendrogram | A branching tree-like diagram that illustrates the hierarchical relationships among items in a dataset; for example, the relationships among protein sequences of different organisms can be represented by a dendrogram. |
cohort | individuals all of the same age |
half-life | The number of years it takes for 50% of a sample of an isotope to decay. |
geographical coordinate system | System that uses the measures of latitude and longitude to locate points on the spherical surface of the Earth. |
dyspepsia | /dis-PEP-see-yə/ n |
lambert | unit of brightness of light |
dejecta | /də-JEK-tə, dee-/ n |
recombinant line | a new combination of DNA fragments formed by cutting DNA segments from two sources with restriction enzyme fragments and then joining the fragments together with DNA ligase |
hydrophilic | having a strong affinity for water; tending to dissolve in, mix with, or be wetted by water - |
harmonic mean | An average defined byIt gives greatest weight to small values |
hemipenis | a hemipenis (plural hemipenes) is one of a pair of copulatory organs of male snakes, lizards, and amphisbaenians |
ctenophore | a member of the animal phylum Ctenophora |
gps | Global Positioning System - a system that utilizes satellites and a handheld device to pinpoint one's exact location on the Earth. |
prisoner | An individual involuntarily confined in a penal institution, including persons: (1) sentenced under a criminal or civil statute; (2) detained pending arraignment, trial or sentencing; and (3) detained in other facilities |
normal distribution | A common probability distribution displayed by population data |
scleroseptum | one of many radiating calcareous partitions in the skeletal cup (corallite) of stony corals |
foramen | an opening in a structure |
temperate deciduous forest | Forested biome found in the mid-latitudes and dominated by deciduous vegetation. |
uv radiation | the region of the electromagnetic spectrum consisting of wavelengths from 1 to 400 nm |
turbinate | resembling an inverted cone |
hybrid zone | A region where two related populations that diverged after becoming geographically isolated make secondary contact and interbreed where their geographical ranges overlap. |
interstitial water | water in the pore spaces of soil or rock |
proliferation | to reproduce or increase rapidly and repeatedly |
radioactive isotope | An isotope (an atomic form of a chemical element) that is unstable; the nucleus decays spontaneously, giving off detectable particles and energy |
trihedral | with three surfaces, e.g |
marine toxicology | a broad field of study encompassing the production, fate, and effects of natural and synthetic harmful chemical substances, such as pollutants, in the marine environment |
christmas tree coral | a recently discovered (2002) deep water black coral (Antipathes dendrochristos) observed on deep rocky banks off southern California.The species, which was described in 2005, forms bushy colonies that grow up to to three meters in height and width, and resembles ornamented Christmas trees |
life expectancy at birth | The predicted average length of life at birth. |
cell | The basic unit of all organisms |
pleopod | one of the five paired abdominal appendages used for swimming by shrimps; used for attachment of eggs by female shrimps, lobsters and crabs; also called a swimmeret |
vortex | A rapid spiraling motion of air or liquid around a center of rotation. |
dacryocystitis | /dack-ree-oh-sist-TIGHT-əs/ n |
cortex | the outer portion (layer) of an organ |
algorithm | An explicit computational procedure that uses a precise sequence of simple operations to perform a complex operation |
radioactivity | the spontaneous decay of the nucleus of an element |
greenhouse effect | The warming of planet Earth due to the atmospheric accumulation of carbon dioxide, which absorbs infrared radiation and slows its escape from the irradiated Earth. |
function | the role that a biological structure or feature plays in survival, reproduction or other activities of an organism. |
mri | Abbreviation for "Magnetic Resonance Imagin." MRI is a procedure in which radio waves and a powerful magnet linked to a computer are used to create detailed pictures of areas inside the body |
migration rate | The rate at which subpopulations exchange migrants per generation |
cumulonimbus cloud | A well developed vertical cloud that often has top shaped like an anvil |
visible radiation | energy at wavelengths from 400 - 700 nm that is detectable by the human eye |
axial cortex | the layer around the central core of the axis of an octocoral |
ems | Ethyl methanesulfonate (methanesulfonic acid ethyl ester) |
geographic information system | a database that uses spatial and geographic information to create detailed maps |
refugium | an area that remains unchanged while areas surrounding it change markedly; hence the area serves as a refuge for species requiring specific habitats |
div | See defective interfering virus. |
biome | ; found near the equator in South America and Africa; characterized by thin soils, heavy rainfall, and little þuctuation in temperature. |
accuracy | the closeness by which a set of measurements approaches the true value |
punctate | describes a surface stippled with tiny pores |
flaring corallite | a corallite with expanding, trumpet-like curves to the outer corallite wall |
melanic | very dark or black color |
negative binomial regression model | a useful empirical methodology when data are overdispersed, that is, when the variance of the distribution is considerably larger than the mean |
double helix | The form commonly taken by DNA (and also by double-stranded RNA |
query form | A Query Form is a web page allowing users to retrieve information from a database.See also: |
endothecal dissepiment | one of many horizontal partitions across the corallite within the corallite wall |
edge wave | A wave of water that moves parallel to the shore |
particulate matter | Particles of dust, soot, salt, sulfate compounds, pollen, or other particles suspended in the atmosphere. |
plain | uniformly colored or unadorned with structures or other features |
immune response | The reaction of the body to substances that are foreign or treated as foreign |
average excess | The difference between the average trait value of individuals who carry a particular allele and the average of the population |
unincorporated territory | a United States insular area in which the United States Congress has determined that only selected parts of the United States Constitution apply |
visible wavelengths | wavelengths approximately 400 to 700 nm |
selective permeability | A property of biological membranes that allows some substances to cross more easily than others. |
secondary pollutant | Atmospheric pollutants that are created chemically in the atmosphere when primary pollutants and other components of the air react |
solar constant | A term used to describe the average quantity of solar insolation received by a horizontal surface at the edge of the Earth's atmosphere |
amh | See anatomically modern human. |
cay | a small, low coastal island or emergent reef of sand or coral; flat mound of sand and admixed coral fragments built upon a reef flat or just above high tide level |
structural landform | Is a landform created by massive Earth movements due to plate tectonics |
biogeography | the study of the geographical distribution of species. |
torpor | a dormant state |
leave-one-out analyses | Studies of a microbial community that lacks one of its constituent microbial taxa. |
growth rate | Increase in mass per unit of time |
coccoid | spherical in shape |
infiltration capacity | The ability of a soil to absorb surface water. |
flotsam | wreckage or discarded material, e.g |
degeneration | a process by which tissue deteriorates, loses functional activity, and may become converted into or replaced by other kinds of tissue; deterioration which causes some degree of loss of original function; the process of declining from a higher to a lower form |
prevailing winds | winds that blow consistently from one direction; the typical winds for a particular region and time of year |
balanced design | A common term for a dye balanced design, meaning that each sample, or each group of samples of the same treatment, is labeled equally often with both the red and the green dye. |
metabolic pathway | a set of oriented reactions interacting under given physiological conditions via simple or apparently simple intermediates |
aliquot | a portion of a sample; a subsample |
degradation | the breaking down of a substance into smaller or simpler parts |
v. et. | see also (vide etiam) |
tubiform | a shape resembling a tube |
canopy | the more or less continuous cover of branches and foliage formed collectively by the tops, or crowns, of adjacent trees |
marine iguana | the marine iguana (Amblyrhynchus cristatus) inhabits the Galapagos Island, an archipelago on the Equator, 800 kilometers west of the Ecuadorian coast |
cis-regulation | Refers to the regulation of when and where a gene is transcribed by DNA sequences that lie to either side (5′ or 3′) of the gene or within the introns of the gene. |
stony coral | a synonym of hard coral |
displacement behavior | a behavioral response that is appropriate for one situation appears in another situation, for which it is inappropriate |
canaliculus | a very small canal |
precision | the ability of an instrument to measure a variable and to repeatedly obtain the same result |
tonsils and adenoids | Prominent oval masses of lymphoid tissues on either side of the throat. |
sequestration enabling reagent | A reagent that sequesters starting materials or reaction by-products, in order to simplify removal from a reaction mixture. |
locus | The site in a linkage map or on a chromosome where the gene for a particular trait is located |
restrictive conditions | The particular environmental conditions which do not allow growth of a conditional lethal mutant but result in the expression of the mutant phenotype. |
stevensine | a bioactive alkaloid isolated from a number of marine sponges |
algorithm | A sequence of computational tasks or actions that carry out a specific function. |
overland flow | The topographic movement of a thin film of water from precipitation to lower elevations |
bermuda high | High pressure system that develops over the western subtropical North Atlantic |
floriform | flower-shaped |
burkitt's lymphoma | A type of Non-Hodgkin's lymphoma that most often occurs in young people between the ages of 12 and 30 |
undefined medium | A growth medium in which not all the components have been identified |
arthroscopy | a surgical procedure to examine the inside of a joint |
plantae | Group, at the kingdom level, in the classification of life |
k-means clustering | A clustering approach that searches for a specific number of clusters (k) maximizing a global target function |
exclusion | A DNA test result indicating that an individual is excluded as the source of the DNA evidence |
yoctomole | One septillionth mole; 10-24 mole. |
rubbery | a tough, resilient mass |
wet collection | a museum collection of specimens that are stored in ethanol, isopropanol, formalin or other liquid preservatives |
dicynodont | A member of a group of Permo-Triassic herbivorous pig-like terrestrial vertebrates |
succession | Directional cumulative change in the types plant species that occupy a given area, through time. |
flora | the entire group of plants found in an area |
molecular weight marker | A DNA fragment of known size used as a standard for comparison when estimating the size of unknown DNA fragments following gel electrophoresis |
hot spot | A volcanic area on the surface of the Earth created by a rising plume of magma. |
fault | a crack or fracture in the Earth's crust accompanied by a displacement of one side of the fracture |
petabyte | a measure of data size |
dorsum | /DORE-səm/ adj |
simple | not divided or branched |
buoyant density | The density possessed by a molecule or particle when suspended in an aqueous salt or sugar solution. |
differential centrifugation | A method used to separate the components of cells on the basis of their size and density. |
tumor | Any abnormal proliferation of cells. |
hypertext | Text displayed electronically with embedded links to other text or to images, sounds, movies or other multimedia content |
research | A systematic investigation designed to develop or contribute to generalizable knowledge |
carposporangium | a single-celled structure in red algae that produces diploid carpospores on the carposporophyte |
led | a very small light often used in electronic instrumentation |
s | See selection differential. |
chert | Very fine grained silica (SiO2) that forms layers or nodules in sequences of sedimentary rocks. |
cation | a particle that carries a positive electrical charge |
outgroup | A species or group of species that is closely related to the group of species being studied, but clearly not as closely related as any study-group members are to each other. |
positive selection | See directional selection. |
bipectinate | having two margins which are toothed, like a comb; descriptive of the gills (ctenidia) of aquatic mollusks |
monocyte | A type of blood cell involved in inflammatory reactions. |
dry line | A boundary the separates dry and moist air in the warm sector of a mid-latitude cyclone wave |
posterior odds ratio | A ratio of the probability of a hypothesis given a particular set of data relative to the probability of another hypothesis given the same data (Prob(H1|D)/Prob(H2|D)) |
cerulean | dark blue color |
fetch | the uninterrupted distance over which the wind blows (measured in the direction of the wind) without a significant change of direction |
retractable | capable of being drawn or pulled back |
solum | Part of the soil that is capable of supporting life. |
placental mammals | See eutherian mammals. |
chromosome | An organized structure of DNA containing many genes that is wrapped around proteins found in cells |
seepage | the movement of water through a porous medium |
game theory | See evolutionary game. |
mgi | Houses a database that provides integrated access to data on the genetics, genomics, and biology of mouse (Mus musculus). |
joint bleeds | bleeding into joints that can cause joint disease and is treated by infusion of clotting factor |
paralysis | Permanent or temporary loss of sensation or voluntary motion |
diffusion | The spontaneous tendency of a substance to move down its concentration gradient from a more concentrated to a less concentrated area. |
continental drift | The gradual movement of the Earth's continents that has occurred over hundreds of millions of years. |
deflation hollow | A surface depression or hollow commonly found in arid and semiarid regions caused by wind erosion |
topology | The study of the deformability of intact structures. |
official index | in taxonomy, a list of names or works suppressed or declared invalid by action of the International Commission on Zoological Nomenclature |
organ of corti | The actual hearing organ of the vertebrate ear, located in the floor of the cochlear canal in the inner ear; contains the receptor cells (hair cells) of the ear. |
benthic organism | an organism whose habitat is on or near the bottom of a stream, lake, or ocean |
apomorphy | a relatively derived or advanced or unique character state |
mercury barometer | Type of barometer that measures changes in atmospheric pressure by the height of a column of mercury in a U-shaped tube which has one end sealed and the other end immersed in an open container of mercury |
calorie | a unit of measurement defined as 4.184 absolute joules or the amount of energy it takes to raise the temperature of one gram of water from 15 to 16 degrees Celsius (or 1/100th the amount of energy needed to raise the temperature of one gram of water at one atmosphere pressure from 0 degrees C to 100 degrees C) |
commensal | having benefit for one member of a two-species association but neither positive nor negative effect on the other |
allele | a number of alternate forms of a gene occupying a given locus on a chromosome |
thermal equator | Continuous area on the globe that has the highest surface temperatures because of the presence of the Intertropical Convergence Zone. |
kinetics | the study of acceleration, motion, or rate of change |
isometric growth | growth that occurs at the same rate for all parts of an organism so that its shape is consistent throughout development |
essential fish habitat | under the Magnuson-Stevens Fishery Conservation and Management Act, those waters and substrates that fishes require to spawn, breed, feed, or grow to maturity |
apheresis | Collection of peripheral blood cells, especially stem cells, by a device similar to a dialysis machine |
big crunch | Collapse of the Universe into its original form before the Big Bang |
ozone shield | the ozone (O3) layer in the stratosphere that gives protection to the Earth's surface because of intense absorption of harmful solar ultraviolet radiation by the gas |
vestimentum | a short region immediately behind the head of a vestimentiferan tube worm.The front part of the vestimentum forms a collar |
gymnosperms | Non-flowering seed plants, for example, pine. |
glutinous | sticky |
pineal gland | A small gland on the dorsal surface of the vertebrate forebrain that secretes the hormone melatonin. |
iteroparity | the reproductive condition in which individuals reproduce several times during their lifetime |
hypothermia | a condition when the body temperature is colder than normal (37 degrees C/98.6 degrees F in humans) |
tumid | swollen, inflated. |
median | Statistical measure of central tendency in a set of data |
selfing | See self-fertilization. |
haploid | A cell with half the usual number of chromosomes, or only one chromosome set |
tetrahedron | Silicon atom joined by four oxygen atoms (SiO4) |
serotonergic | a term that means "related to the neurotransmitter serotonin" |
intermediate grade | A grade of Non-Hodgkin's denoting usually moderate growth |
calipee | a fatty, gelatinous substance in green turtles, traditionally used in the preparation of green turtle soup |
download | transferring data (usually a file) from one computer to another |
pennatulacea | an order of soft corals which includes the sea pens and sea pansies |
bayhead beach | An extensive deposit of sand and/or gravel in the form of a beach at the back of a bay. |
electric field | the region extending outward in all directions from an electrically charged material that affects other electrically charged objects; the area around an electrified object where other charges are affected |
artisanal fishing | fishing which is typically a small-scale operation that uses simple fishing methods; fishing for subsistence by coastal or ethnic island groups using traditional methods; fishing with the purpose of catching/collecting aquatic products for sale |
fluorescence-activated cell sorter | An instrument that sorts individual cells on the basis of their fluorescence intensity. |
field capacity | The water remaining in a soil after the complete draining of the soil's gravitational water. |
millimeter | A unit of measure in the metric system |
pool | Scoured depression found on the bed of streams |
bryozoan | Common name for any member of the phylum Bryozoa |
range | the geographical area inhabited by a species or other group; may be continuous or discontinuous |
thigmotactic | responding to touch or outer surface contact |
gif | a bit-mapped digital image graphics file format suitable for efficiently importing image data into computer files or for transmitting or displaying the formatted image on a computer monitor or printing it out |
subsidence | a gradual sinking of land with respect to its previous level; the slow sinking of air, usually associated wit high-pressure areas |
sinemet | The brand name of the most commonly prescribed version of the drug levodopa, consisting of a combination of levodopa and carbidopa. For more information see what patients on our Patient Council have to share on the topic of medication. |
receptor mapping | The use of the known 3-D structure of a ligand to predict features of the complementary structure of the receptor |
long-branch attraction | A phenomenon in phylogenetic analyses when taxa or OTUs that lie at the end of long branches are inferred to be closely related, regardless of their true evolutionary relationships. |
malaise | Feeling bad; a feeling of bodily discomfort, feeling sick |
branchiocardiac groove | in decapod crustaceans, a groove on each side of the carapace which separates the branchial and cardiac regions |
involute | rolled inwards fom the edges |
abundance | the number or amount of something, e.g., the number of organisms per unit of habitat space or number of individuals in a stock or a population |
malesian floral subkingdom | a botanical subkingdom of the Paleotropical Kingdom which encompasses the islands of Southeast Asia and the malay peninsula, extending as far east as New Guinea, the Solomon Islands and Vanatu |
aciniform | resembling a cluster of berries |
character state | The particular form that a character trait takes (e.g., a three-chambered vs |
igneous rock | Rocks formed by solidification of molten magma either beneath (intrusive igneous rock) or at (extrusive igneous rocks) the Earth's surface. |
standard deviation | Square root of the variance; a measure of the typical magnitude of a random fluctuation. |
paleoenvironmental proxy | an environmental remnant of the past (pollen grains, tree rings, lake sediments, pack rat middens, ice cores, coral skeletons) used to assist researchers in deciphering past climatic conditions |
jugostegalia | a basket-like structure formed midventrally by overlapping branchiostegals in some families of eels |
efficacy | The power or ability to produce an effect. |
technology | the creation of products and processes for the purpose of improving human chances for survival, comfort level, and quality of life |
altimeter | an instrument for measuring altitude |
annotation | Note added to a document or image to provide additional needed information |
canadian high | High pressure system that develops in winter over central North America. |
synonymous mutation | The alteration of a codon into a different form that is synonymous with the original. |
glucocorticoid | A steroid produced by the adrenal gland that acts to stimulate production of glucose. |
tissue microarrays | Arrays consisting of tissue specimen cores. |
windward passage | a channel between eastern Cuba and western Haiti that connects the Atlantic Ocean with the Caribbean Sea |
plankton | small aquatic organisms whose direction is controlled by water movements |
transient aggregation | an aggregation characterized by individuals that migrate over long distances and over a short reproductive season |
teal | greenish blue color |
cardinal points | The four main navigational directions (North, East, South, and West) found on a compass or a map. |
asperity | a peak or projection from a surface; pertains to roughness of a surface |
phosphorite | A sedimentary rock rich in phosphate. |
heterodont | a type of dentition where the teeth are not all similar |
parasite | An organism that lives in or on a host organism and uses it as a source of food and shelter, to the detriment of the host. |
refractory | Not yielding (at least not yielding readily) to treatment. |
exponential | Growing at a constant rate r, so that numbers increase with ert. |
cyclomorphosis | cyclical changes in form such as seasonal changes in morphology, as seen in some planktonic crustaceans |
homologous structures | Structures in different species that are similar because of common ancestry |
fluorescence | The emission of electromagnetic radiation following absorption of shorter wave length light. |
type 1 error | A false positive, or the rejection of a true null hypothesis |
cementation | the process of deposition of dissolved mineral components in the interstices of sediments or coral skeletons |
dolioform | barrel-shaped |
interradial | in fishes, between the rays (or spines), e.g |
thorax | the central region of a crustacean body |
interference competition | competition in which one species prevents another from having access to a limiting resource |
first stage regulator | attached to the scuba tank, the first stage regulator reduces the high tank pressure to an intermediate pressure of 100 to 150 psi above the surrounding water pressure |
trait | A particular aspect of the phenotype that can be measured or observed directly, e.g |
montiform | mountain-shaped |
stigma | The tip of a gynoecium, which provides a surface for pollen grains to attach to and germinate |
indeterminate cleavage | A type of embryonic development in deuterostomes, in which each cell produced by early cleavage divisions retains the capacity to develop into a complete embryo. |
hydrostatic pressure | the pressure exerted by the weight of fluids |
cell | basic unit of structure and function in living things. |
antilles current | one of the currents of the North Atlantic subtropical gyre flowing along the northern side of the Greater Antilles |
suspension | Erosional movement of sediment continually held in the transport medium of air, water or ice. |
gene dosage | The number of copies of a gene within an individual. |
lithosphere | Is the solid inorganic portion of the Earth (composed of rocks, minerals, and elements) |
saltation | Transport of sediment initiated by moving air or water where particles move from a resting surface to the transport medium in quick continuous repeated cycles. |
zoning | a process in which a marine protected area is divided into discrete zones and particular human uses of each zone are permitted, often with conditions such as gear limitations in fishing and waste discharge prohibitions in tourism |
ocean basin | Part of the Earth's outer surface that is comprised of the ocean floor, mid-oceanic ridges, continental rise, and continental slope |
osmotic pressure | the pressure that is needed to counteract the osmotic passage of water molecules across a semipermeable membrane into the more concentrated solute |
convergence precipitation | The formation of precipitation due to the convergence of two air masses |
gene name | A "gene name" is a word or phrase that uniquely identifies a gene |
thunderstorm | A storm several kilometers in diameter created by the rapid lifting of moist warm air which creates a cumulonimbus cloud |
ovule | the structure in a seed plant that develops into a seed after fertilization. |
attomole | One quintillionth mole; 10-18 mole. |
cloning | The process of making genetically identical copies. |
kettle hole | Depression found in glacial deposits |
scotoscope | an instrument for detecting objects in darkness |
venture capitalist | an individual who invests in start-up companies with the intent of making a large return on investment. |
detritivore | An organism that feeds on dead organic debris. |
brush | a cluster of bristles |
deposition | The taking and recording of testimony of a witness under oath before a court reporter in a place away from the courtroom before trial. |
conopeptide | a family of molecules found in the venom of species of marine cone shell snails (Conus sp) that can act as an analgesic and alleviate pain.One particular group, the omega-conopeptides, blocks channels on nerve cells that transport calcium ions and thereby interfering with the production of neurotransmittors |
stage | The elevation of the water surface in a stream channel. |
buffer zone | the region near the border of a protected area; a transition zone between areas managed for different objectives |
polymerase chain reaction | A method for repeatedly duplicating trace amounts of DNA in order to provide detectable quantities for analysis |
mole | the mass of a compound in grams numerically equal to its molecular weight |
sex inversion | change of sex naturally or after steroid hormone application; also called "sex reversal" |
dynein | A large contractile protein forming the side-anns of microtubule doublets in cilia and flagella. |
hypomorphic mutation | Neomorphic Mutation |
osmosis | The diffusion of water across a selectively permeable membrane. |
descent with modification | Darwin’s term for evolution. |
ventral fin | a synonym for pelvic fin |
ratchet | an anti-dilution provision where an investor is granted additional shares of stock without charge if the company later sells the shares at a lower price. |
occluded front | A transition zone in the atmosphere where an advancing cold air mass sandwiches a warm air mass between another cold air mass pushing the warm air into the upper atmosphere. |
mutation | A permanent alteration to a gene where part of the DNA within the gene is different from what it should be. There may be an extra or missing part for example. Mutations may affect the proper growth or development of a person |
receptacle | The base of a flower; the part of the stem that is the site of attachment of the floral organs. |
variegated | A plant with yellow or white blotches or streaks on the green leaves and stems, as well as on flower buds and flowers. |
hypomorphic mutation | Loss-of-function Mutation |
gnathic | pertaining to the jaw |
antisymmetry | a pattern of deviation without a side bias |
brittlestar city | a huge assemblage of brittlestars on the Macquarie Ridge seamount |
stream gradient | The change in elevation from a stream's headwaters to its mouth expressed in degrees, percentage, or as a distance ratio (rise/run). |
no take zone | a marine protected area that is completely (or seasonally) free of all extractive or non-extractive human uses that contribute impact (some exceptions may be permitted for scientific activities); also called "marine reserve" or "fully protected area" |
small nuclear rna | A nuclear RNA ranging in size from 50 to 200 bases. |
mrca | Most recent common ancestor. |
molarity | A common measure of solute concentration, referring to the number of moles of solute in 1 L of solution. |
karyokinesis | the cellular process of nuclear division |
ectoderm | The outer germ layer; gives rise to tissues that include the skin and nervous system. |
surface creep | The sliding and rolling movement of soil particles on the Earth's surface because of wind |
conidium | A spore formed asexually, usually at the tip or side of the hypha. |
c-card | a scuba diving certification card from scuba certifying agencies, such as NAUI, BSAC, NOAA, PADI, etc. |
subpolar glacier | Glacier in which the ice found from the its surface to base has a temperature as cold as -30° Celsius throughout the year |
water consumption | The complete removal of water from some type of source, like groundwater, for some use by humans |
phase change | A shift from one developmental phase to another. |
expressivity | The degree to which an inherited characteristic is expressed in a person |
alluvial | relating to mud and/or sand deposited by flowing water |
posting | a single message entered into a network communications system |
brevilingual | having a short tongue |
second law of thermodynamics | each time energy is converted from one form to another, some of the energy is always degraded to a lower-quality, more dispersed, less useful form; no system can convert energy from one form to another useful form with 100 percent efficiency; energy cannot be transferred spontaneously from a cold body to a hot body |
anthesis | Flowering, time when male structure within an inflorescence is mature and pollen is shed. |
mou | an interagency agreement defining the role and responsibility which each agency has in dealing with particular issues |
mixing ratio | The ratio between the weight (mass) of water vapor (or some other gas) held in the atmosphere compared to the weight of the dry air in a given volume of air |
mean | Usually refers to the arithmetic mean: for n values, z1, ..., zn, = (Σizi)/n |
saturation | in diving, the degree to which a gas is dissolved in the blood or other tissues |
deceased | Recently dead |
gill chamber | in fishes, the cavity containing the gills on each side of the rear of the head, enclosed by the operculum and the branchiostegal membrane |
regional metamorphism | Large scale metamorphic modification of existing rock through the heat and pressure of plutons created at tectonic zones of subduction. |
gas hydrate | Frozen deposits rich in hydrocarbons that occur in the deep ocean basins. |
heat of vaporization | The quantity of heat a liquid must absorb for 1 g of it to be converted from the liquid to the gaseous state. |
coliform bacteria | bacteria whose presence in water is an indicator of pollution and of potentially dangerous contamination |
green turtle | one of seven extant species of marine turtles |
closed circuit scuba | a diving apparatus which allows divers to re-breathe exhaled air after removal of carbon dioxide and addition of supplemental oxygen |
odds ratio | See posterior odds ratio. |
bubblegum coral | a deep water gorgonian, Paragorgia arborea, found in the North Pacific and North Atlantic Oceans at depths that may exceed 1400m |
join point. | The site where two DNA molecules are connected |
magnetic north | the direction a compass needle points when there are no local interfering influences |
segregating sites | Sites that are polymorphic in a sample of sequences. |
poacher | a person who hunts or fishes illegally; a family (Agonidae) of small bottom-dwelling cold-water marine fishes |
morphogenesis | Developmental changes in the inner structure and outer form of an organism. |
chaetognath | Any worm of the phylum Chaetognatha, commonly called an arrowworm |
redox couple | An electron donor and its corresponding oxidized form. |
mesoproterozoic | Division of time from 1600 to 1000 Mya. |
levee | Ridge of coarse deposits found alongside the stream channels and elevated above the floodplain |
chlorophyll | a green pigment present in green plants and cyanobacteria |
tumor board | A group of specialists who meet regularly to discuss management of individuals who have cancer. |
biogenic | refers to things which came about as a result of the activities of living organisms |
reject | in taxonomy, to set aside the name of a taxon in favor of another name |
applet | a small Java program that can be embedded in a web page to create special effects |
eye | Area in the center of a hurricane that is devoid of clouds. |
tract | A group or bundle of nerve fibers with accompanying connective tissue, located within the central nervous system. |
ornamental | a non-food species that is produced and maintained solely for exhibit purposes in home or public aquaria, or in ornamental garden ponds |
vermiculation | a worm-like marking |
dentary | /DENT-er-ee/ n |
ventral disk | a "sucking disc " formed by the uniting of the pelvic fins in some fishes; for example, clingfishes |
diploid | Having two sets of chromosomes (2n), one inherited from each parent, where (n) represents the number of chromosomes. |
agglutinate | clumped together, as if by glue |
triangulation | the use of three or more fixed points, such as receiver buoys or satellites in orbit around the earth, to pinpoint the location of an object |
blood-brain barrier | A semipermeable membrane that controls diffusion of molecules into the cerebrospinal fluid. |
articulating | united by means of a moveable joint |
cyclonic | refers to a region of low atmospheric sea level pressure; or, the wind system around such a low pressure center that has a clockwise rotation in the Northern Hemisphere and a counterclockwise rotation in the Southern Hemisphere |
informed consent | legally required procedure to ensure that a patient knows about the potential risks and benefits of a treatment before it is started. |
mode | a statistical measure of central tendency |
continental divide | The elevated area that occurs on a continent that divides continental scale drainage basins. |
p | In the results of a BLAST search, the lowest P-value given to any set of HSPs found in a database are listed in the "P(N)" column. |
element | Any substance that cannot be broken down to any other substance. |
x-ray crystallography | A method in which the diffraction pattern of X-rays is used to determine the arrangement of individual atoms within a molecule. |
dna chip | a small piece of glass or silicon that has small pieces of DNA arrayed on its surface |
nimbostratus clouds | Dark, gray low altitude cloud that produces continuous precipitation in the form of rain or snow |
coastal wetland | Wetland habitat found along a coastline and is covered with ocean salt water for all or part of the year |
ghost net | a lost or abandoned fishing net that drifts through the oceans posing a danger to fishes and other marine life |
aculeiform | having a sharp point; needle-shaped |
hydrophilicity | (lit |
genotype | Reannealing Reformation of double-stranded DNA from dissociated single strands. |
haplotype | A way of denoting the collective genotype of a number of closely linked loci on a chromosome. |
dactyloid | finger-like |
sonar | SONAR is an acronym for "sound navigation and ranging." Active sonar describes an apparatus that transmits high frequency sound waves in water and registers the vibrations reflected back from an object |
ribbon falls | Spectacular narrow waterfalls that occur at the edge of a hanging valley. |
eye-in-the-sea | a video camera capable of operating in deep water (up to 3,000 ft) for days at a time |
ir radiation | earth-emitted radiation over thermal wavelengths: 3-15 micrometers |
serosa | a serous membrane |
dnasei-sensitivity quantitative trait loci | (dsQTL) |
branchial siphon | the incurrent siphon in some mollusks |
reproductive assurance | The assurance that an individual can fertilize its eggs or ovules by selfing. |
pectoral | pertaining to the chest area |
bract | A modified leaf that often subtends reproductive structures. |
abalone | a univalve mollusk (class Gastropoda) of the genus Haliotis |
precipitable water | Amount of water potentially available in the atmosphere for precipitation |
stream | A long narrow channel of water that flows as a function of gravity and elevation across the Earth's surface |
apogee | the point in the orbit of the Moon or man-made satellite farthest from the Earth; the point in the orbit of a satellite farthest from its companion body |
abbreviate | shortened |
alkaline phosphatase | See “Bacterial Alkaline Phosphatase.” |
algaecide | a chemical agent specifically designed and used to kill or inhibit the growth of algae; also called 'algicide' |
universal genetic code | See canonical code. |
gas | a major state of matter consisting of freely moving atoms and molecules with no definite shape or volume, like air |
invert | to turn inward; turn inside out or upside down |
power | The term power has quite a few different meanings |
discoidal | disc-shaped; flat and round shape |
frequency of recombination | the number of crossover events observed between two linked loci expressed as a proportion of the total number of meioses sampled |
mri | See Magnetic Resonance Imaging |
brain | The master control center in an animal; in vertebrates, the brain and spinal cord make up the central nervous system. |
thermal infrared radiation | Form of electromagnetic radiation with a wavelength between 3 to 14 micrometers (µm). |
cleavage divisions | First 4 to 6 divisions of the young embryo, multiplying the number of cells without increasing the size. |
coefficient of variation | in statistics, it refers to the standard deviation of a distribution divided by the distribution's mean, providing a standardized measure of the variation in a distribution, which does not increase simply because the mean itself increases or because the units of measurement change |
protein histochemistry | 1 |
cytology | the study of the structure and function of cells |
hygroscopic water | Water held within 0.0002 millimeters of the surface of a soil particle |
labium | any lip-like structure |
sampling error | the variability of a statistic from sample to sample due to chance |
nitrogen fixation | The assimilation of atmospheric nitrogen by certain prokaryotes into nitrogenous compounds that can be directly used by plants. |
flow field effect | A technology utilized in the design of microfluidics systems that utilizes field effects to control flow. |
coral bleaching hotspot | a region of sea surface temperature (SST) that exceeds the climatological maximum for a region by 1 deg C or more |
rainshadow effect | Reduction of precipitation commonly found on the leeward side of a mountain |
captive breeding | raising animals (or plants) in controlled conditions to produce stock for subsequent release into the wild |
capillary action | Movement of water along microscopic channels |
ligand | Recessive A term applied to one member of an allele pair that is not expressed when the other, dominant, member of the pair is present. |
extra- | outside, beyond |
ri plasmid | see plasmid RI. |
aristotle's lantern | a highly developed chewing apparatus used for feeding in some sea urchins |
allele | Alleles are the different types of a single gene |
all-or-none event | An action that occurs either completely or not at all, such as the generation of an action potential by a neuron. |
coral rubble | fragments of hard coral |
growth | an increase in cell size or cell number, or both |
confined aquifer | Aquifer between two layers of relatively impermeable earth materials, such as clay or shale. |
gene gun | A method of gene delivery, also known as a biolistic gun, that uses high-pressure helium gas to blast microscopic particles of gold coated with the material of interest into skin tissue; a method used to deliver DNA vaccines |
fibrillation | Irregular heartbeat |
bajada | Consecutive series of alluvial fans forming along the edge of a linear mountain range |
cenozoic | the current geologic era, which began 66.4 million years ago and continues to the present |
brackish | mixed fresh and salt water |
normalization | A database refinement process that organizes a database so that results obtained from queries to the database are always unambiguous. |
hierarchical clustering | A greedy clustering approach in which pairs of genes or clusters are sequentially connected until they form a tree-like structure. |
bathymetry | the science of measuring ocean depths to determine the topography of the sea floor |
adnate | joined together |
evaporative cooling | The property of a liquid whereby the surface becomes cooler during evaporation, owing to a loss of highly kinetic molecules to the gaseous state. |
johnson-sea-link submersible | the Johnson-Sea-Link (JSL) I and II submersibles are owned and operated bythe Harbor Branch Oceanographic Institution |
archi- | a prefix meaning primitive, original, or ancestral |
lobate | lobe-shaped |
downstream | in the direction of the water movement |
ovigerous | carrying eggs or modified for carrying eggs |
island model | The simplest model of population structure |
branchial chamber | in crustaceans, the area between the body and carapace which encloses the respiratory organs (gills) |
reductionism | The doctrine that complex systems can be completely understood in terms of its simplest parts |
apobiosis | the local death of a part of an organism |
p | Pancytopenia |
wave height | the vertical distance between the crest and adjacent trough of a wave |
iron fertilization | see "ocean iron fertilization" |
progradation | The natural extension of a shoreline seaward. |
gro-luxtm | A wide-spectrum fluorescent lamp suitable for plant growth purposes. |
gradient | The steepness of a slope as measured in degrees, percentage, or as a distance ratio (rise/run). |
diffusion approximation | A mathematical approximation that describes diffusion using a differential equation |
mutational heritability | The ratio, VM/VE, between the mutational variance and the environmental variance. |
biological species concept | Definition of species as groups of individuals that can successfully interbreed with each other in nature but that are reproductively isolated from other such groups. |
sea-level | The average surface elevation of the world's oceans. |
quadratic selection gradient | See selection gradient, quadratic. |
matrix | The inner mitochondrial space. |
polyphydont | a type of dentition where the teeth are continuously replaced |
metastasis | Spread of cancer cells from one part of the body to another |
emarginate | a notched margin, but not so deeply as to be forked |
social dominance | A hierarchical pattern of social organization involving domination of some members of a group by other members in a relatively orderly and long-lasting pattern. |
imitation | a behavior that occurs when an animal immediately mimics the actions of another animal while they are in each other's presence |
phylogenetic tree | a branching tree-like diagram (dendrogram) used to represent the evolutionary history of a set of taxa, with the leaves (or terminal branches) representing contemporary taxa and the internal branches representing hypothesized ancestors |
risk | The probability of harm or injury occurring as a result of participation in a research study |
avogadro's number | a large constant used in chemistry and physics |
suspension feeder | an organism that feeds by capturing particles suspended in the water column |
absorptive feeder | an animal, such as a parasitic tapeworm, that absorbs digested food products through the body wall |
water vapor | the water present in the atmosphere in gaseous form |
equilibrium centrifugation | The separation of particles on the basis of density by centrifugation to equilibrium in a gradient of a dense substance. |
mud | A defective derivative of phage Mu |
biotic potential | the maximum rate a population can increase under ideal conditions |
feeder cells | A convenient way to grow ES cells in the laboratory is via co-culture with feeder cells |
parataxonomist | a field-trained biodiversity collection and inventory specialist recruited from local areas |
variables | Quantities that describe the state of a system and that evolve through time |
ophthalmic | Pertaining to the eye |
zonation | the occurrence of single species or groups of species in recognizable bands that might delineate a range of water depth or a range of height in the intertidal zone |
antimetabolite | A substance that prevents utilization of a metabolite. |
cm | See centiMorgan. |
landmark | A point of reference for orientation during navigation. |
photometric | of or relating to photometry; a more precise measurement of the brightness (intensity) of light, which can be digitized and calibrated |
newton | A unit of force that creates an acceleration on a mass of 1 kilogram equal to 1 meter per second with no friction and under the conditions of a vacuum. |
actinotroch | a larval form found in the Phoronida (horseshoe worms) |
wetland | Natural land-use type that is covered by salt water or fresh water for some time period |
transformation | The application of a specific mathematical function so that data are changed into a different form |
suprapsammon | organisms which swim just above sand and are dependent upon it as a food source |
deduction | Inference in which the conclusion about particulars follows necessarily from general theory |
biotechnology | A set of biological techniques developed through basic research and now applied to research and product development |
genetic counseling | Provides patients and their families with education and information about genetic-related conditions and helps them make informed decisions. |
mesocyclone | A cylinder of cyclonically flowing air that form vertically in a severe thunderstorm |
shy-drager syndrome | See multiple system atrophy |
equinox | Two days during the year when the declination of the Sun is at the equator |
ecology | The study of the factors that influence the distribution and abundance of species. |
deconvolution | An algorithm-based method for eliminating noise and improving the resolution of digital data |
degrees of freedom | in statistics, the number of independent comparisons that can be made between the members of a sample; in a contingency table it is one less than the number of row categories multiplied by one less than the number of column categories |
evidence | Something that can help identify the persons responsible for a crime, items used to establish an element of crime or to reconstruct crime events or link crimes. |
dormancy | a period of suspended growth and metabolic activity |
neuromast | a sensory cell with a hair-like process capable of detecting motion or vibrations in water |
cyanobacteria | A group of single-celled Bacteria (formerly called blue-green algae) |
glacial drift | A generic term applied to all glacial and glaciofluvial deposits. |
vesiculate | thin and bladder-like |
kindred | Archaic name for 'blood' relatives. |
flood tide | the phase of the tide between low water and the subsequent high tide; a rising tide |
complement | A complex series of blood proteins whose action "complements" the work of antibodies |
hydrogen ion | an individual atom of hydrogen which is not attached to a molecule and therefore has a positive (+) charge |
hypha | The unit of structure of the fungi; a tubular filament. |
ion | An atom or molecule with a positive or negative electrical charge |
species aggregate | a group of species that are morphologically similar and therefore difficult to identify |
daylight savings time | The setting of time so it is one hour ahead starting in the spring and one hour back beginning in the fall in the Northern Hemisphere |
dyne | /DINE/ n |
nursery | an area favored for birth or egg deposition and where juveniles and immature members of a community feed and grow |
micelle | An aggregate of lipids in which the polar head groups face outward and the hydrophobic tails face inward; no solvent is trapped in the center. |
floodplain | a lowland along a riverbank, lake, and coastline which is subjected to periodic inundation |
zooid | of the distinct individuals forming a colonial invertebrate animal, such as a hydrozoan |
neonate | a newborn animal |
molecular replacement | A method for solving biomacromolecular structure based on the use of a model derived from a related, previously solved structure. |
associate | In Colleague information, "Associate" refers to coworkers or collaborators. |
exopinacoderm | the unicellular external surface of a sponge (ectosome composed of pinacocytes) |
interpolated name | in taxonomy, a name placed within parentheses (after a generic name to denote a subgenus; after a genus-group name to denote an aggregate of species, or after a specific name to denote an aggregate of subspecies |
parapatric | pertains to the ranges of species that are contiguous but not overlapping; adjacent but non-overlapping distributions |
vd | See dominance variance. |
sibling | A person who shares the same mother or father |
gonosome | a collective term for all reproductive structures of a colonial hydrozoan |
rhomboid | diamond-shaped |
coenocytic | Referring to a multinucleated condition resulting from the repeated division of nuclei without cytoplasmic division. |
seaward | Positioned or located away from land but towards an ocean or sea. |
venture capital | money invested by venture capitalists in startup companies in exchange for equity. |
day/night sst | observations of sea surface temperature obtained during both daytime and nighttime orbits from the Advanced Very High Resolution Radiometer (AVHRR) on NOAA's polar satellite |
stenosis | Narrowing of a duct, tube, or blood vessel |
expected number | Prediction of the number of observations occurring for an event based on the probability of the event given the hypothesis being tested and the total number of observations in the sample. |
stratocumulus clouds | Low altitude gray colored cloud composed of water droplets that has a patchy appearance |
progressive supranuclear palsy | Progressive Supranuclear Palsy (PSP) is a movement disorder that can be mistaken for Parkinson's disease |
tropical disturbance | an organized mass of thunderstorms with a slight cyclonic wind circulation of less than 20 knots |
competence | Technically, a legal term, used to denote capacity to act on one's own behalf; the ability to understand information presented, to appreciate the consequences of acting (or not acting) on that information, and to make a choice. |
downstream | In the direction of the 3' end of a DNA strand. |
translational research | Science directed at clinical application. |
homozygote | A diploid individual that carries the same allele at a genetic locus. |
pinnacle reef | a nearly cylindrical reef with vertical sides; may be up to 200 m diameter and 50 m in height |
baffling | to impede the force or movement of flowing water, such that sediment particles may settle from suspension |
metadata | information about data or other information |
dyne | unit of force to accelerate 1 gram to 1 cm per second per second |
endangered species | under the Endangered Species Act (ESA), an endangered species is one that is in danger of extinction throughout all or a significant portion of its range |
oceanic crust | Basaltic portion of the Earth's crust that makes up the ocean basins |
beach | an aggregation of unconsolidated sediment, usually sand, that covers the shore |
cell | A cell is the smallest self-functioning unit found in living organisms |
dextral | right, as opposed to sinistral, or left |
iteration | A single round of data processing |
spine | a sharp hard bony structure on the skeleton or skin |
olfactory dysfunction | A reduced or impaired ability to detect odors, which can be an early sign of Parkinson's disease |
crust | Earth's outer most layer of solid rock |
anthropogenic | made by people or resulting from human activities |
star | A large and very massive, self-luminous celestial body of gas that illuminates via the radiation derived from its internal source of energy. |
score | To determine the presence or absence of a phenotype by testing for growth under different conditions (e.g., plus and minus an auxotrophic supplement or permissive and nonpermissive conditions) |
eleutherobin | a marine pharmaceutical initially isolated from the soft coral Eleutherobia sp |
side effect | Secondary effect caused by cancer treatment. |
calorie | The amount of heat energy required to raise the temperature of 1 g of water by 1°C; also the amount of heat energy that I g of water releases when it cools by 1°C |
ssm | See slip-strand mispairing. |
categorical excusion | a category of actions that do not individually, collectively, or cumulatively have a significant effect on the environment and that have been found to have no such effect in procedures adopted by a federal agency in implementation of these regulations and for which, therefore, neither an environmental assessment nor an environmental impact statement is required |
determinate growth | A type of growth characteristic of most animals and some plant organs, in which growth stops after a certain size is reached. |
sea-level pressure | Average atmospheric pressure at sea-level |
intrasexual | involving only one of the sexes, male or female |
dinosaur | Member of an extremely diverse group of ancient reptiles varying in body shape, size, and habitat. |
evidence | Something that can help identify the responsible persons, establish an element of crime, reconstruct crime events or link crimes. |
coral reef watch | see CRW (Coral Reef Watch) Program |
knoll | a small reef within the lagoon or on shallow shelves |
episome | An extrachromosomal DNA fragment, such as a plasmid. |
otolith | a calcareous structure of the inner ear of some animals, such as fishes, that functions in the detection of changes in gravitational forces relative to orientation |
dna | the abbreviation for deoxyribonucleic acid |
gill | A localized extension of the body surface of many aquatic animals, specialized for gas exchange. |
color | a quality of light, depending on its wavelength |
instability | Atmospheric condition where a parcel of air is warmer that the surrounding air in the immediate environment |
zoned reserve | An extensive region of land that includes one or more areas undisturbed by humans surrounded by lands that have been changed by human activity and are used for economic gain. |
systematics | Biological classification and nomenclature. |
denticles | /DENT-ə-kəls/ n |
royalty | the payment of a percentage of sales as compensation to product developers, patent licensors, or even investors. |
stop codon | A UAG, UAA |
species | A group whose members possess similar anatomical characteristics and have the ability to interbreed. |
microprocessor | An integrated electronic circuit designed to carry out a specific set of operations. |
dextrocardia | /decks-troh-KARD-ee-yə/ n |
compressed air | air compressed to a pressure higher than the surrounding atmospheric pressure (ambient pressure) |
confocal microscopy | A light microscope technique that constructs an image from information derived from point-by-point scanning of a field. |
basidium pl. basidia | A reproductive appendage that produces sexual spores on the gills of mushrooms |
produced water | water associated with oil and gas reservoirs that is produced along with the oil and gas; also called "brine" (and may contain high mineral or salt content) or "formation water" |
ascus pl. asci | A saclike spore capsule located at the tip of the ascocarp in dikaryotic hyphae; defining feature of the Ascomycota division of fungi. |
parathesia | Numbness, prickling or tingling feeling |
hemophilia treatment centers | A group of federally-funded hospitals that specialize in treating patients with coagulation disorders |
zip | a compressed file format (.zip); to compress a file using a zip utility |
agricultural pollution | the liquid and solid wastes from all types of farming, including runoff from pesticides, fertilizers and feedlots; erosion and dust from plowing, animal manure, carcasses, crop residues and debris |
gene ontology | an ontology is a controlled vocabulary of terms that have logical relationships with each other and that are amenable to computerised manipulation |
bullate | describes a blistered or puckered surface |
warm desert | Desert found in the subtropics or interiors of continents at the middle latitudes where precipitation is low and surface air temperatures are high. |
hydrology | the science dealing with the properties, distribution and circulation of water and snow |
solar system | The collection of celestial bodies that orbit around the Sun. |
cruciate | cross-shaped |
metapopulation | A collection of discrete demes |
organic molecule | a molecule that contains one or more carbon atoms |
fire coral | a species of hydroid (Millepora sp.) that frequently is brownish to orange-yellow in color and forms encrusting colonies that can assume the shape of its support structure |
langley | unit of solar radiation |
strand vegetation | vegetation growing on sandy beach and dune areas |
patronym | a taxonomic name derived from the name of a person |
pinniped | an aquatic mammal in the order Carnivora, such as seals, sea lions and walruses, whose front limbs have evolved to become "flippers" |
cytogenetic marker | 1 |
cf | an abbreviation for the Latin word 'confer', meaning "compare" |
cranial nerve | A nerve that leaves the brain and innervates an organ of the head or upper body |
distal tubules | of the |
calyciform | goblet or cup-shaped |
competitive advantage | an advantage that a firm has relative to competing firms; may be in the form of intellectual property, expertise, partnerships, assets, etc. |
culture | The ideas, customs, skills, rituals, and similar activities of a people or group that are passed along to succeeding generations. |
arborescent colony | a coral colony with a tree-like growth structure |
dugong | /DOO-gawng/ n |
vertical aerial photograph | Photograph taken from a overhead or near overhead angle from a platform in the atmosphere. |
solar radiation | Electromagnetic radiation that originates from the Sun |
megapascal | A unit of pressure equivalent to 10 atmospheres of pressure. |
divergence | The acquisition of differences after evolutionary separation (e.g., of species). |
abyssal zone | the deep sea region below 2,000 meters (some consider it to be the region below 4000+ meters) |
topical | Applied directly to the skin. |
angstrom | A unit of measurement that was widely used until recently to describe molecular dimensions, but the unit nanometer (nm) is now more commonly used |
free | unconstrained or not chemically bound in a molecule or not fixed and capable of relatively unrestricted motion |
deposition nuclei | Six-sided microscopic particle that allows for deposition of water as ice crystals in the atmosphere |
accommodation | The automatic adjustment of an eye to focus on near objects. |
local extinction | the disappearance of a population from a local area |
meteorite | A meteorite is a part of a meteor from outer space that enters the earth's atmosphere |
base flow | Rate of discharge in a stream where only the throughflow and groundwater flow from subsurface aquifers contribute to the overall flow. |
parentage testing | (synonyms: maternity testing, paternity testing) The process through which DNA sequences from a particular child and a particular adult are compared to estimate the likelihood that the two individuals are related; DNA testing can reliably exclude but cannot absolutely confirm an individual as a biological parent |
insolation | Direct or diffused shortwave solar radiation that is received in the Earth's atmosphere or at its surface. |
protocols | the selections of methods and how they are used to gain data and information at a site |
flood | Inundation of a land surface that is not normally submerged by water from quick change in the level of a water body like a lake, stream, or ocean. |
principal component analysis | a technique for simplifying complex, multi-dimensional datasets to a reduced number of dimensions, the principal components |
helix | Twisted shape in the form of a spiral, coil or screw |
polymerase chain reaction | A technique to make large quantities of a specific fragment of DNA |
immature | describes an animal that has not reached sexual maturity, regardless of size or age |
cat scan | see Computerized Tomography |
ovule | The female gamete in a flowering plant |
troglobite | an obligate cave dweller |
neuron | A nerve cell; the fundamental unit of the nervous system, having structure and properties that allow it to conduct signals by taking advantage of the electrical charge across its cell membrane. |
oceanic crust | Along with continental crust, the outermost layer of the solid earth, colder and more solid than the mantle and core |
convection current | a movement of air or water caused by changes in density or thermal gradients |
gene name | In ZFIN, a "gene name" is a word or phrase that uniquely identifies a gene |
updraft | Upward movement of air. |
ribbon reef | a large offshore linear reef, seaward of a fringing reef, which is linear but does not form a barrier to the land |
washu | Each member of the set of Olson-Riles clones (generated at Washington Univ.) not only has an ATCC number associated with it, but also a WashU number, which is crosslinked with the ATCC number in the SGD database. |
distyly | A polymorphism with two different arrangements of anther and stigma that promotes outcrossing. |
stipe | A stemlike structure of a seaweed. |
apoptosis | A programmed or controlled form of cell death characterized by the loss of cell junctions and microvilli, condensation of the cytoplasm, margination of the nuclear chromatin, and fragmentation of the nucleus. |
fission | The separation of a parent into two or more individuals of approximately equal size |
ganglion | A cluster (functional group) of nerve cell bodies in a centralized nervous system. |
acrocentric chromosomes | Are those with the centromere very close to the outer tip, giving the chromosome a ‘V' shaped appearance |
acerate | needle-shaped |
oceanic | associated with sea-water environment seaward of the shelf-slope break |
tab-delimited | A text file with data fields separated by "tab" characters |
dropsy | /DRAWP-see/ n |
spatulate | spoon or broadly blade-shaped |
taino | Pre-Columbian indigenous inhabitants of the Bahamas, Greater Antilles and the northern Lesser Antilles |
prion | An infectious form of protein that may increase in number by converting related proteins to more prions. |
greenhouse gases | atmospheric gases, primarily carbon dioxide, methane, and nitrous oxide restricting some heat-energy from escaping directly back into space |
plesiomorphy | an ancestral character state |
cmo | Contract manufacturing organization |
cyclone | Area of low pressure in the atmosphere that displays circular inward movement of air |
lmc | See local mate competition. |
preimplantation diagnosis | see PDG. |
intrathecal | Into the spinal fluid. |
tidal flat | a marsh or sandy or muddy coastal flatland which is covered and uncovered by the rise and fall of the tide |
natural selection | An adaptation refers to both the current state of being adapted and to the dynamic evolutionary process that leads to the adaptation |
buffer | A substance that consists of acid and base forms in solution and that minimizes changes in pH when extraneous acids or bases are added to the solution. |
bladder | any sac or cavity used to store liquids or gases |
milankovitch theory | Theory proposed by Milutin Milankovitch that suggests that changes in the Earth's climate are cause by variations in solar radiation received at the Earth's surface |
hotspot charts | charted regions that highlight sea surface temperature (SST) anomalies that are greater than 1 deg C above the maximum monthly climatological SST |
bosselated | covered with small, knob-like projections |
principle of segregation | the principle, first noted by Gregor Mendel, that explains why children dont always directly inherit their parents characteristics. |
superior | the anatomical term for "above" (e.g., the head is superior to the shoulder) |
compression | in information technology, decreasing the size of stored information by reducing the representation of the information without significantly diminishing the information itself, usually by removing redundancies |
geo | Genetically engineered organism |
emissivity | The ratio of total radiative output from a body per unit time per unit area at a specific temperature and wavelength to that of a black body under the same environmental conditions. |
heatmap | Heatmap consists of small cells, each consisting of a colour, which represent relative expression values |
diauxic growth | Biphasic growth on a mixture of two carbon sources in which one carbon source is used up before the other one |
agents | Independent, autonomous, software modules that can search the Internet for data or content pertinent to a particular application, such as a gene, protein, or biological system. |
r | Radiotherapy |
wind ripples | Wind ripples are miniature sand dunes between 5 centimeters and 2 meters in length and 0.1 to 5 centimeters in height |
clade | A group or lineage of organisms whose members are descended from a single common ancestor. |
shelf-edge reef | a synonym of ribbon reef |
guardian | An individual who is authorized under applicable state or local law to give permission on behalf of a child to general medical care |
latitude | Latitude is a north-south measurement of position on the Earth |
longitude | an imaginary great circle on the surface of the Earth passing through the north and south poles at right angles to the equator; "all points on the same meridian have the same longitude" |
calicle | one of the small cuplike cavities, often with elevated borders, covering the surface of most corals |
summit | the highest part or point; the top |
tidal period | Time it takes for one tidal cycle. |
trimix | a breathing gas mixture of helium, oxygen, and nitrogen |
trimerophyte | Member of an early group of vascular plants. |
inversely proportional | Cause and effect relationship between two variables where a positive or negative change in the quantity of one causes a predictable opposite change in quantity in the other. |
granulocyte | A type of blood cell involved in inflammatory reactions. |
cold front | in meteorology, a mass of cold air moving toward a mass of warm air |
differentiation | The movement from less specialized cellular forms to more specialized ones |
resilient | resumes the original shape after deformation; elastic |
star genealogy | A genealogy in which all lineages coalesce in a common ancestor at the same time |
sigma | an informal name for the standard deviation |
cape | a piece of land that that projects out into a large body of water |
corymbose | describes coral colonies with horizontal interlocking branches and short upright branches |
crateriform | cup-shaped |
polyspermy | Fertilization of an egg by more than one sperm. |
elimination/reference samples | A term used to describe a sample of known source taken for comparison purposes. |
water withdrawal | The removal of water from some type of source, like groundwater, for some use by humans |
pirna | Piwi-interacting RNA |
oceanodromous | used to describe organisms that migrate only within the ocean, usually from spawning grounds to feeding grounds |
turbidimeter | an instrument for measuring turbidity of liquids |
environmental gradient | Spatial gradient where abiotic and biotic factors vary. |
null hypothesis | In statistical analysis, a hypothesis proposing that there is no statistically significant difference between the observed results of an experiment and the expected results. |
sample | A collection of individuals or measurements obtained from a larger aggregate |
cnidosac | a sac located in a ceras of a nudibranch gastropod which contains undischarged nematocysts (obtained through feeding upon cnidarians) passed from the slug's digestive system |
equilibrium | the state in which the action of multiple forces produces a steady balance, resulting in no change over time |
viscosity | a measure of resistance to flow in a liquid |
d | DHHS |
midocean ridge | an uplifting of the ocean floor that occurs when convection currents beneath the ocean bed force magma up where two tectonic plates meet at a divergent boundary |
desert pavement | A veneer of coarse particles left on the ground after the erosion of finer particles by wind. |
genome | Total DNA of an organism (genes, genetic signalling structures as well as additional DNA sections) |
real time | time in which reporting of events or recording of events is simultaneous with the event |
salinity | Concentration of dissolved salts found in a sample of water |
platform technology | a technique or tool that enables a range of scientific investigations |
mesoderm | The middle of the three germ layers of an embryo that forms the connective, musculoskeletal, and vascular tissue. |
population density | The number of individuals of a population per unit area or volume of living space. |
chromosome | The structure in the cell nucleus that contains all of the cellular DNA together with a number of proteins that compact and package the DNA. |
sewage | the total of organic waste and waste water generated by residential and commercial establishments |
firth | a partly land-locked arm of the sea |
geohab | a joint SCOR-IOC Program of international cooperative research on harmful algal blooms (HABs) in marine and brackish waters |
agonistic behavior | A type of behavior involving a contest of some kind that determines which competitor gains access to some resource, such as food or mates. |
myalgia | Muscle aches |
aeration | the addition of air to a liquid |
allele | A particular form of a gene. |
prosopinacoderm | in sponges, a surface lined with prosopinacocytes |
fore reef slope | a sand covered, gradual or sharply descending slope; the next-to-deepest part of the fore reef |
field guide | a pocket-size book or a CD containing taxonomic keys for identification, illustrations and/or photographs of organisms, distribution maps, and some natural history notes |
red blood cell count | Measurement of the number of red blood cells in a sample of blood. |
androgenesis | male parthenogenesis, i.e., the development of a haploid embryo from a male nucleus |
calyx | the upper or open end of the corallite or coral polyp cup; the central body of entoprocts (goblet worms) or crinoids (sea lilies and feather stars) |
hypermorphic mutation | Loss-of-function Mutation |
oceanography | the study of the earth's oceans and their interlinked ecosystems and chemical and physical processes |
benthic carbon dioxide flux | the amount of carbon dioxide (CO2) released from a unit area of sediment over a specific time interval, during the decomposition of organic matter |
h2 | See heritability. |
depilate | /DEP-ə-late/ v |
chromosome | A specific arrangement of genes and other DNA |
tree | A large woody plant that has a trunk which supports branches and leaves. |
induction | Inference of a generalized conclusion from particular instances |
lymphomatoid papulosis | A rare skin disorder that appears to be cancer but is actually benign in most cases. More Information. |
half-life | The average time required for the disappearance or decay of one-half of any amount of a given substance. |
heat of vaporization | The amount of heat required to change a given amount of a liquid into a gas; 540 calories are required to change 1 gram of liquid water into vapor. |
cumulative distribution | The probability that a random variable will be less than a given value is called its cumulative distribution. |
dysphagia | Difficulty in swallowing. |
insulin | A small protein hormone that regulates glucose levels in the body |
heterogametic | Containing one each of the two forms of the sex chromosome. |
3' utr | 3' Untranslated Region |
parapatric | A geographic distribution in which different types are found in different places and meet only in a narrow zone. |
ultraviolet radiation | Electromagnetic radiation with a wavelength between 0.1 and 0.4 micrometers (µm). |
hydrophobic | Literally means 'water hating' |
family health history | A record of medical information about an individual and their family members, as well as information about the eating habits, activities, and environments the family shares. |
latent heat of vaporization | The amount of heat energy required from the environment to change the state of a liquid to a gas |
pattern formation | The ordering of cells into specific three-dimensional structures, an essential part of shaping an organism and its individual parts during development. |
ibd | See identity by descent. |
hft lysate | A lysate from a lysogenic phage that includes a substantial proportion of transducing fragments |
holliday junction | The cruciform structure formed as an intermediate in homologous genetic recombination. |
continental drift | A theory, originally proposed by Alfred Wegener, that the continents were once part of a single land mass and have since moved across the Earth to their present locations |
biogeochemical cycling | Cycling of a single element, compound or chemicals by various abiotic and biotic processes through the various stores found in the biosphere, lithosphere, hydrosphere, and atmosphere. |
cognitive map | A representation within the nervous system of spatial relations between objects in an animal's environment. |
immunology | Study of all phenomena related to the body's response to antigenic challenge. |
extrapolation | a conjecture based on the assumption that a phenomenon or trend observed in the present can be extended into the past or future. |
magmatic hotspot | in geology, a hotspot is a location on the Earth's surface that has had volcanism for a long period of time |
isozymes | Multiple forms of an enzyme that differ from one another in one or more of the properties. |
bilaterian | Member of the group that includes the majority of animal phyla and includes all animals with bilateral (left/right) symmetry. |
haploid | a cell having half the usual number of chromosomes, e.g |
tropical | region in which the climate undergoes little seasonal change in either temperature or rainfall |
chromatids | in each cluster during |
leeward | Downwind side of an elevated area like a mountain |
double helix | That is, for a certain length the two strands of the double helix become disconnected, and then later they reconnect |
gall | A tumorous growth in plants. |
oligotrophic | refers to water bodies with low concentrations of nutrients |
caruncle | a fleshy outgrowth |
dew | Condensation of water on the Earth's surface because of atmospheric cooling. |
angstrom | A unit of measure used to measure inter-atomic distances within molecules equal to 10-10 meter. |
penultimate | the one before the last; the second from the end |
database | a structured file of information or a set of logically related data stored and retrieved using computer-based means |
payoff matrix | A matrix showing the payoff that is won by each possible strategy when played against each other strategy. |
polycystic kidney disease | a group of conditions characterized by fluid filled sacs that slowly develop in both kidneys, eventually resulting in kidney malfunction. |
adaptive landscape | See fitness landscape. |
informed consent | A term used to describe the responsibility of doctors or researchers to ensure that patients or people being researched have an understanding of the relevant facts regarding their care or participation in research |
amplification efficiency | A measure of how closely the majority of PCR cycles in a given run approximate perfect doubling of product |
biennial plant | Plant species that completes its life in two growing seasons. |
precambrian | the geological time in Earth’s history before the beginning of the Cambrian period (about 540 million years ago). |
frost | Deposition of ice at the Earth's surface because of atmospheric cooling. |
plagioclase feldspar | A type of feldspar that is rich in sodium and calcium |
true south | Direction of the South Pole from an observer on the Earth. |
zenith | the point of the celestial sphere which is directly overhead |
agglomerate | to group or gather together in a dense cluster |
data | Factual information (as measurements or statistics) used as a basis for reasoning, discussion, or calculation |
neap tide | Tide that occurs every 14 to 15 days and coincides with the first and last quarter of the moon |
innate releasing mechanism | In ethology, a circuit within an animal's brain that is hypothesized to respond to a specific stimulus, setting in motion, or "releasing," the sequence of movements that constitute a fixed action pattern. |
continental crust | The outermost layer of the solid Earth |
gelatinous | having the the consistence of jelly |
informed consent | The ethical practice of obtaining consent to undergo a medical procedure or participate in a medical study while respecting individual choice and protecting an individual from harm. |
medusa bud | one of the buds of a hydroid, destined to develop into a gonophore or medusa |
mafic magma | Magma that is relative poor in silica but rich in calcium, magnesium, and iron content |
heterogametic | Producing two types of euploid gametes with respect to chromosomal content |
ribbed | describes a surface with a series of ridges |
papilliform | nipple-shaped |
glacial lake | A natural impoundment of meltwater at the front of a glacier. |
tinctorial | relating to staining or coloring |
rainsplash | Soil erosion caused from the impact of raindrops. |
adambulacral | pertains to structures situated along the ambulacral grooves of echinoderms |
density-gradient centrifugation | A method of separating particles by centrifugation through a gradient of a dense substance, such as sucrose or cesium chloride. |
finished sequence | Sequence produced to an accuracy of no more than 1 error in 10,000 bases |
load | See genetic load. |
reflected light | Incident illumination (cf |
cell adhesion | adherence of cells to surfaces or to other cells |
density-independent factors | Any factor influencing population regulation that acts to reduce population by the same percentage, regardless of size. |
icriforum | the official web site of the International Coral Reef Initiative (ICRI) |
confidence interval | the probability, based on statistics, that a number will be between an upper and lower limit |
trench | a deep steep-sided depression in the ocean floor caused by the subduction of oceanic crust beneath either other oceanic crust or continental crust |
bursa | a sac or sac-like cavity |
correlation coefficient | a measure of the relationship between variables |
upper air westerlies | Consistent winds that exist in the upper troposphere that flow east to west from about 20° of latitude to the poles. |
genetic management | The incorporation of information on the levels and distribution of genetic variability into management programmes, with the overall aim of conserving genetic resources (levels of allelic diversity and associated genotypic variance in ecologically significant traits). |
rnase protection | A method of detecting the presence of a specific RNA in a sample |
concordance | Presence of the same characteristic in both members of a pair of twins (or set of individuals) |
leaf | The main site of photosynthesis in a plant; consists of a flattened blade and a stalk (petiole) that joins the leaf to the stem. |
climap project | Multiuniversity research project that reconstructed the Earth's climate for the last million years by examining proxy data from ocean sediment cores. |
flabelliform | fan-shaped |
duct | any tubular structure |
amoebozoa | One of the major kingdoms of eukaryotes |
k | Karyotype |
circa | about; around |
clavate | club-shaped |
reasoning | in argumentation- statements that link the evidence to the claim, showing why the data counts as evidence to support the claim |
arcims | ESRI software that allows for centrally hosting and serving GIS maps, data, and applications for use on the Internet |
genealogy | The tree-like ancestral relationship that connects a set of genes at a single genetic locus. |
total body irradiation | Radiation aimed at the entire body to destroy cancer cells |
bloodworm | a marine polychaete worm used as bait in angling |
multiple use mpa | often employed over larger areas, multiple-use areas allow for integrated management of complete marine ecosystems, usually through a zoning process |
subsea permafrost | Form of permafrost that exists beneath the sea in ocean sediments. |
revolution | See Earth revolution. |
equator | Location on the Earth that has a latitude of 0°. |
allelic | Two variants are allelic if they are alleles at the same genetic locus. |
trace evidence | Physical evidence that results from the transfer of small quantities of materials (e.g., hair, textile fibers, paint chips, glass fragments, gunshot residue particles). |
solid phase extraction | A sample purification method based on the affinity of either the desired or undesired components of a reaction mixture for a solid material and subsequent filtration of the solid material from the reaction. |
argument from design | The argument that the order seen in the living world implies that it was created by a divine power. |
three-hybrid system | A technique for the detection of complexes that involve three proteins; also used to refer to a technique for the detection of RNA-protein interactions. |
database | Any file system by which data gets stored following a logical process. (see also relational database) |
condensation nuclei | Microscopic particle of dust, smoke or salt that allows for condensation of water vapor to water droplets in the atmosphere |
genetics | for example, a purely statistical definition of the term doesn't imply anything in particular about actual biochemical interaction between genes |
syntype | in taxonomy, each specimen of a type series from which neither a holotype nor a lectotype has been designated |
burrower | an animal that makes a hole or burrow in the substratum and lives in it |
genome | The entire number of genes in an organism |
voluntary | Free of coercion, duress or undue inducement |
recombination | Transfer of information from one DNA molecule to another |
species | the taxonomic rank below genus; there are many definitions of this word, all of which are controversial to some extent, but the most common definition used for sexually reproducing organisms is “a group of interbreeding organisms that is reproductively isolated from other such groups.” |
fore reef escarpment | a slope or cliff seaward of the fore reef terrace, at a depth of about 25-30m |
dependent variable | A measurable characteristic who's value is conditioned on the value of a second variable (the independent variable) and who's value may be predicted from the relationship with the independent variable. |
mendelian | 1 |
fractal geometry | a method to study shapes that are self-similar over many scales |
prosthesis | Artificial body parts, such as arms, legs, hips |
urban area | an area in which a majority of the people are not directly dependent on natural resource-based occupations |
cerebral | The brain, of the brain |
riffle | Bar deposit found on the bed of streams |
marsupial | Any member of the mammalian group Metatheria |
volcanic pipe | A dyke reaches the surface of the Earth |
permutation test | A statistical test in which the data are randomized many times to determine the statistical significance of the experimental outcome. |
data stewardship | a subset of data management and consists of the application of rigorous analyses and oversight to ensure that data sets meet the needs of users |
trunkfish | any fish species in the family Ostraciidae (order Tetraodontiformes) |
spyhopping | behavior of a whale when raising the head vertically out of the water, usually while stationary, then sinking below the surface without much splash |
imbricate | with overlapping parts, such as scales |
macerate | to disintegrate tissues by means of cutting, soaking or enzymatic action to obtain a cell dissociation |
greenhouse effect | The greenhouse effect causes the atmosphere to trap more heat energy at the Earth's surface and within the atmosphere by absorbing and re-emitting longwave energy |
inflated | swollen or expanded |
petaflop | A theoretical measure of computer speed that corresponds to a thousand trillion (1015) floating point operations per second. |
throughflow | The roughly horizontal flow of water through soil or regolith. |
mole | The number of grams of a substance that equals its molecular weight in daltons and contains Avogadro's number of molecules. |
fissure | Opening or crack in the Earth's crust. |
fluctuation test | An experimental approach designed by Luria and Delbruck to determine whether mutations are random or directed, and to measure mutation rates (see http://www.sci.sdsu.edu/~smaloy/MicrobialGenetics/topics/mutations/fluctuation.html). |
abraded | worn or frayed |
spicule | minute, hard, needle-like or sharp-pointed processes or projections |
megabase | A unit of DNA length corresponding to 1 million bases. |
bone marrow suppression | Decreased growth of blood cells |
noctilucent clouds | High altitude clouds composed of ice crystals that appear to glow silver or bright blue shortly after sunset. |
swash | A thin sheet of water that moves up the beach face after a wave of water breaks on the shore. |
natural climate record | a record of climatic events found by examining the natural environment (e.g., coral growth bands, tree rings, layers of ice in glaciers) |
natural theology | A theology based on reason and ordinary experience instead of on special or supposedly supernatural revelation. |
entrainment | the synchronisation of one biological rhythm to another or to a zeitgeber cycle, e.g |
pristine | an area having its original purity, not contaminated or corrupted by human intervention; the original or pure condition or state of something; unspoiled |
olfactory | pertaining to the sense of smell (olfaction) |
development | The progressive production of the phenotypic characteristics of a multicellular organism, beginning with the fertilization of an egg. |
sarcoplasmic reticulum | A specialized endoplasmic reticulum that regulates the calcium concentration in the cytosol. |
multiplex | This word is mainly used as 'multiplexing', thus referring to a method by which many parameters are simultaneously tested and processed. |
autumnal equinox | the equinox at which the sun approaches the Southern Hemisphere and passes directly over the equator |
addorsal | close to, but not on the middle of the dorsal surface |
trait | See character. |
helicoid | spiral-shaped |
sequence | As a noun, the sequence of a DNA is a buzz word for the structure of a DNA molecule, in terms of the sequence of bases it contains |
tip | The terminal node on a phylogenetic tree. |
bow | the front part of a vessel |
urbanization | Expansion of cities into rural regions because of population growth |
parsing | The use of algorithms to analyze data into components. |
nucleotide repeat expansion | A type of mutation in which a set of tandemly repeated sequences replicates inaccurately to increase the number of repeats |
induced fit | The change in shape of the active site of an enzyme so that it binds more snugly to the substrate, induced by entry of the substrate. |
angiosperms | Flowering seed plants. |
octopus | in scuba, a backup second stage regulator connected to the first stage, intended for the benefit of other scuba divers in case their air supply should fail |
lithothamnion ridge | a synonym for algal ridge |
radiometer | an instrument for measuring radiation energy |
geometric mean | An average defined by the nth root of the product of n values: |
nadp reductase | An enzyme that transfers electrons from ferrodoxin to NADP+, yielding NADPH. |
non-calcareous alga | a fleshy macroalga versus a calcareous form |
parallel analysis | Simultaneous analysis of thousands of samples. |
chiton | a marine mollusk of the Subclass Polyplacophora, which contains about 600 species of sedentary animals commonly known as chitons.They are found from shallow waters to depths of about 400 m |
morphogen | A substance, such as bicoid protein, that provides positional information in the form of a concentration gradient along an embryonic axis. |
heuristic | A method based on empirical information that has no explicit rationalization. |
de bruijn graph | A directed mathematical graph that uses a sequence of letters of length k to represent nodes |
java | a programming language created by Sun Microsystems which allows the user to create programs which run well in a networked environment (such as the World Wide Web) |
sex chromosome | One of the two chromosomes that specify an organism's genetic sex |
turbidity flow | a flow of dense, muddy water moving down a slope due to a turbidity current |
cloning | the process of producing a genetically identical copy (clone). |
genotype | Entirety of genetic features |
earth rotation | Refers to the spinning of the Earth on its polar axis. |
extended phenotype | The phenotype of all the individuals affected by a gene. |
monk seal | an endangered species of seal (Monachus schauinslandi) normally found on the leeward (southwest) sides of the Northwestern Hawaiian Islands, and occasionally sighted in the Main Hawaiian Islands |
day length | Period of time for a location on the Earth when insolation from the Sun is being received. |
antibody | A blood protein produced in response to an antigen (any substance capable of producing antibodies) in the body |
gene map | the linear arrangement of mutable sites on a chromosome as deduced from genetic recombination experiments. |
eradicate | Get rid of |
conjunctivitis | Red, itchy eyes; eye infection |
multivariate analysis of variance | an analysis of variance with two or more dependent variables |
bray-curtis similarity coefficient | a similarity coefficient used to determine site similarities based on organism abundances |
swamp | a type of wetland that is dominated by woody vegetation |
sex chromosomes | One of the two chromosomes that specify the sex of an organism |
homogeneous | of similar or uniform structure or composition throughout; refers to anything which displays a uniform or consistent composition |
monsoon | a periodic wind caused by the effects of differential heating, with the largest being the Indian monsoon found in the Indian Ocean and southern Asia |
linear regression | regression in which the relationship is linear |
aeolid nudibranch | a type of nudibranch (order Nudibranchia) in which the mantle is extended into long finger-like projections, the cerata (sing: ceras), rather than a feather-like external gill on the dorsal surface |
sequence id | Sequence accession identifier |
colonial coral | a coral composed of many individuals |
j curve | a J-shaped growth curve that depicts exponential growth |
digitiform | finger-shaped |
gulf | a portion of an ocean or sea that extends into the land; a partially land-locked sea, e.g., the Gulf of Oman |
condensation | See Dehydration synthesis. |
pedigree index | Evaluation of an individuals genetic merit based solely on the genetic evaluations of its parents ( the average of parent evaluations). |
coastal margin | the boundary line between land and sea |
tera | a metric prefix meaning 10 to the 12th power, or one trillion |
arcview | desktop geographical information system (GIS) software developed by ESRI used to do some basic GIS operations and print maps |
loculus | the calcified area or fiber-filled space within the axis of a gorgonian or an interseptal space within the gastrovascular cavity of an anthozoan; a small cavity or space within an organ of a plant or animal |
cytoplasm | on structures called ribosomes. |
sea snake | a member of the family Hydophiidae |
peat | Extensive deposits of undecayed organic material formed primarily from the wetland moss Sphagnum. |
chloramphenicol | An antibiotic that inhibits protein synthesis by binding to the 50s ribosomal subunit and blocking the peptidyltransferase reaction |
species richness | the number of species in an area or biological collection |
azooxanthellate coral | a coral which does not have symbiotic zooxanthellae in its tissues |
hyposaline | referring to water with a salinity lower than that of natural seawater |
reproductive isolation | The separation of distinct gene pools, as a result of genetic differences that prevent successful interbreeding. |
aquifer | a subterranean layer of porous water-bearing rock, gravel, or sand capable of storing and conveying water to wells and streams |
thrombolite | a microbial sedimentary structure characterized by a macroscopic clotted mesostructure; a microbialite having of a clotted mesostructure |
biogrid | BioGRID (General Repository for Interactions database) is a database of genetic and physical interactions developed by the Tyers Group at Mount Sinai Hospital, Toronto, Canada. |
macrophotography | photography of a subject where the image is recorded in the same or larger than actual size; type of photography employing the use of special lenses or attachments allowing close-range photos of a given subject |
estuarine conditions | refers to saline and tidal conditions which occur due to tidal ebb and flow in a region where fresh and marine waters mix |
range | A statistical measure of the dispersion of observation values in a data set |
tidal channel | a channel that dissects the tidal flat surface |
spouse | Husband or wife. |
vermiform | worm-shaped |
crawl | tracks and other signs left on a beach by a seaturtle |
intrinsic value | a value placed on the inherent qualities of a species, independent of its value to humans |
galeiform | helmet-shaped |
mri | Magnetic Resonance Imaging (see above) |
supermale | a male which does not change sex and is the principal spawner |
phylogram | A phylogenetic tree in which the branch lengths are proportional to the evolutionary distance between nodes |
geomorphology | The field of knowledge that investigates the origin of landforms on the Earth and other planets. |
open circuit scuba | a diving apparatus in which exhaled air is expelled into the water as bubbles; no part is rebreathed by the diver |
log ratio | The logarithm, usually to the base 2, of the ratio of the measured signal intensities in the two channels of a two-colour microarray experiment |
radiometric dating | A method of dating samples based on analysis of radioactive isotopes and the products of their decay. |
node | The point in a phylogenetic tree where one branch splits into two. |
autapomorphy | A derived character state unique to a particular taxon. |
post-emergent nest | a seaturtle nest in which the majority of hatchlings have emerged through the surface of the sand |
shortwave radiation | Electromagnetic radiation with a wavelength between 0.1 and 0.7 micrometers (µm) |
work | in the International Code of Zoological Nomenclature, any text whether published, unpublished, or carrying a disclaimer containing a name or other information bearing on nomenclature |
rock–paper–scissors game | A game in which strategy A beats B, B beats C, and C beats A. |
fixation probability | See probability of fixation. |
bulb | A modified bud with thickened leaves adapted for underground food storage. |
ctenoid | comb-shaped; with a comb-like margin |
red queen | Continual coevolution between two species (e.g., between host and parasite). |
homodont | type of dentition where the teeth are all similar, indicative of a uniform diet |
groundwater recharge | The replenishment of groundwater with surface water. |
cloud computing | The abstraction of underlying hardware architectures (for example, servers, storage and networking) to a shared pool of computing resources that can be readily provisioned and released. |
dna annealling | the reformation of double stranded DNA from thermally denatured DNA |
fra | a designated area, within a Fisheries Management Area (FMA), where certain specified fish harvesting activities are prohibited |
rangeland | Land-use type that supplies vegetation for consumption by grazing and browsing animals |
tissue | A group of similar cells that work together to perform a specific function. |
groundfish | fishes, usually of commercial value, that live on or near the bottom; also called "bottom fish" |
source species | a species whose births exceed deaths in an area |
cold spot | Sites within a gene (or genome)Êat which mutations occur with much lower frequency than at other sites. |
moderate hemophilia | A categorical term used to describe someone with a factor VIII or IX level ranging from 1% to 5% of normal blood levels of factor. |
restriction enzyme | Enzymes that can cut DNA into strands at specific places along its length. |
oral pinnule | arms of feather stars (Echinodermata-Crinoidea) bear numerous pinnately arranged branches called "pinnules ." Those pinnules closest to the disk are the proximal, or oral pinnules |
vep | Ensembl Tool that allows users to provide a list of variants and export a results file containing consequence types. |
chromosome | A rodlike structure in the cell nucleus, along which the genes are located |
embryonic germ cell | EG cell |
metamorphic rock | A rock that forms from the recrystallization of igneous, sedimentary or other metamorphic rocks through pressure increase, temperature rise, or chemical alteration. |
adult | a fully developed and sexually mature animal, physically capable of reproducing under appropriate physiological, ecological and sociobiological conditions |
dura mater | /D(Y)ER-ə MADE-er/ The tough, fibrous outer membranous sheath of the brain and spinal cord. |
bivalve | A mollusk with a soft body enclosed by two distinct shells that are hinged and capable of opening and closing. |
hemimetabolous | Developing directly through a series of nymphal stages with a similar morphology to the adult (e.g., as in grasshoppers and bugs) |
social group | a small population in which the individuals are bound together in relatively stable patterns of interaction and in some ways depend upon each other for its survival |
shore reef | a synonym of fringing reef |
heat island | The dome of relatively warm air which develops over the center of urbanized areas. |
standard deviation | a measure of the spread or dispersion of a set of data |
crust | the outermost layer of the Earth, consisting of relatively low-density rocks |
carrion | the dead and rotting body of an animal; carrion is food for scavenging animals |
genital bursa | an invagination at the base of an arm of a brittle star |
eusocial | Fully social organisms in which only one or a few individuals in a colony reproduce. |
altimetry | a technique to measure the height of the sea surface from radar pulses transmitted from a satellite |
carbon dioxide | Common gas found in the atmosphere |
maternal half sib | Brother or sister having the same dam but different sires. |
alternate paternity | (synonyms: false paternity, nonpaternity) The situation in which the alleged father of a particular individual is not the biological father |
low complexity region | Regions of biased composition including homopolymeric runs, short-period repeats, and more subtle overrepresentation of some residues |
craterform | massive shape with a broad base and a large, central depression |
temporal summation | A phenomenon of neural integration in which the membrane potential of the postsynaptic cell in a chemical synapse is determined by the combined effect of EPSPs or IPSPs produced in rapid succession. |
fungi | Group, at the kingdom level, in the classification of life |
spatial data | information about the location and shape of, and relationships among, geographic features, usually stored as coordinates and topology |
meio- | smaller; less than |
n-terminus | The end of a polypeptide chain that has a free amino acid (-NH2) group. |
photo-quadrat | a quadrat that is photographed for purposes of later analysis and permanent record for species monitoring or measurement |
convergence | come together and meet at a point |
rhyniophyte | Member of an early group of vascular plants. |
reconnaissance survey | a brief survey of a study area before the collection of field data |
pedigree | A medical drawing that includes all of a person’s close relatives, the relationship between family members, and health information |
arcmap | a component of ESRI's ArcGIS developed as client software specifically for the Microsoft Windows environment to enable more intuitive processing and presentation of ArcGIS data |
cellular component | Refers to subcellular structures, locations, and macromolecular complexes |
smog | Generic term used to describe mixtures of pollutants in the atmosphere |
executive order | one of a number of official documents, numbered consecutively, through which the President of the United States manages the operations of the Federal Government |
intestacy | Dying without leaving a will. |
algal bloom | a sudden spurt of algal growth that can indicate potentially hazardous changes in local water chemistry |
sample | A sample is a subset group of data selected from a larger population group |
berm | a low, incipient, nearly horizontal or landward-sloping area, or the landward side of a beach, usually composed of sand deposited by wave action; a mound of earth formed to control the flow of surface water; a sloped wall or embankment used to prevent the inflow or outflow of materials into/from an area |
independent variable | Variable in a statistical test that is thought to be controlling through cause and effect the value of observations in another dependent variable modeled in the test. |
saltwater intrusion | The invasion of saltwater into freshwater aquifers in coastal and inland areas |
nanoplankton | minute phytoplankton organisms with a body diameter between 0.2 and 20 micrometers |
gamma distribution | The sum of a number of independent, exponentially distributed variables (e.g., the time taken for a number of independent events to occur) follows a Gamma distribution. |
hydrophobic | 'fears water' (hydro = water; phobic = fear) |
background level | the concentration or level of a substance or other factor in an environment that is not the result of human activities, e.g., background levels of chemicals, light, sound, etc |
neutron | An electrically neutral particle (a particle having no electrical charge), found in the nucleus of an atom. |
mutation rate | Number of mutations (alteration of a DNA sequence) arising in an individual per gene or per nucleotide site per unit time (for example per generation). |
speed of light | Velocity of light in a vacuum |
substantia nigra | From the Latin for "black substance," the substantia nigra is a part of the basal ganglia that is rich in dopamine-producing nerve cells and the black pigment neuromelanin |
bifurcation | A node in a tree that connects exactly three branches |
alliance | agreement between two or more companies to cooperate in some way. |
starch | Complex carbohydrate composed of thousands of glucose units |
zooecium | the skeleton of a bryozoan zooid |
reflection | When light strikes a surface and then leaves at the same angle |
chromosome | to another without altering the number of chromosomes |
extensible markup language | A set of specifications for formatting web documents that allows the creation of custom data tags that enable flexible transmission of data between applications and servers. |
corticocyte | in octocorals, a cell that secretes gorgonin, which forms the axis of a gorgonian |
electron microscopy | A type of microscopy that uses an electron beam to form an image |
chd | Coronary heart disease, heart disease |
actinophore | a pterygiophore and its associated fin ray |
quanta meter | an instrument used to measure the number of photons |
pedunculate | having a stem or stalk |
strobe | pertaining to underwater photography, an artificial light device or flash device used to restore wavelengths of light filtered out by water |
roll cloud | A dense, cigar shaped cloud found above the gust front of a thunderstorm |
allelopathic substance | a substance produced by one organism that adversely affects another organism |
longitude | Longitude is a west-east measurement of position on the Earth |
quality of life | The overall enjoyment of life |
locally-managed marine area | an area of nearshore waters actively being managed by local communities or resource-owning groups, or being collaboratively managed by resident communities with local government and/or partner organizations |
published name | in taxonomy, any name which is printed and circulated, i.e., meets the criteria of publication as stated by the International Code of Zoological Nomenclature; it may be available, unavailable, valid or invalid |
muskeg | Poorly drained marshes or swamps found overlying permafrost. |
pair bond | the temporary or permanent association formed between a female and male animal during courtship and mating |
root | The most ancient branch in a phylogenetic tree. |
dna polymerase | Enzyme that catalyzes the production of DNA. |
denitrifying bacteria | anaerobic bacteria in soil or water that use the nitrate ion as a substitute for molecular oxygen during their metabolism |
regression analysis | a statistical technique applied to data to determine the degree of correlation of a dependent variable with one or more independent variables, in other words, to see if there is a strong or weak cause and effect relationship between things; a statistical process for fitting a line through a set of data points |
catch per unit effort | the number of fish caught by an amount of effort |
plate | One of the large, rigid pieces of Earth's crust that move as the result of circulation in the underlying mantle. |
incipient | beginning to exist or appear; beginner; beginning, starting, coming into existence |
fermentation | Decomposition and breakdown of organic matter by anaerobic means. |
centigrade temperature scale | a thermometric scale in which 0 degrees C (Celsius) marks the freezing point of water and 100 degrees C indicates the boiling point of water at sea level |
valence | The bonding capacity of an atom, generally equal to the number of unpaired electrons in the atom's outermost shell. |
subcutaneous | Under the skin |
force | Process that changes the state of rest or motion of a body. |
neuron | A nerve cell used to transmit information within the central nervous system |
hydrophobic | A molecule or portion of a molecule that does not readily dissolve in water. |
commission | refers to the International Commission on Zoological Nomenclature (ICZN) |
lagoon slope | the back reef on a barrier or atoll reef |
nudibranch | a opisthobranchiate mollusk (sea slugs), having no shell except while very young |
type 2 error | A false negative, or failing to reject a false null hypothesis |
out-of-africa model | The hypothesis that modern humans evolved recently in Africa and spread from there, replacing archaic hominins |
do | the concentration of free oxygen dissolved in water and readily available to aerobic organisms |
relief map | a contour map: a map having contour lines through points of equal elevation |
littoral drift | The sediment that is transported by waves and currents through beach drift and longshore drift along coastal areas. |
environmental impact assessment | detailed studies which predict the effects of a development project on the environment |
biological survey | collecting, processing, and analyzing a representative portion of the resident aquatic community to determine its structural and/or functional characteristics |
ubiquitous | having a worldwide distribution; common to abundant in a given area |
socmon guidelines | SocMon is a set of guidelines for establishing a socioeconomic monitoring program at a coastal management site |
multiplexing | A laboratory approach that performs multiple sets of reactions in parallel (simultaneously); greatly increasing speed and throughput. |
critical entrainment velocity | Velocity required to entrain a particular sized particle into the moving medium of air or water. |
ribosomal rna | The most abundant type of RNA, which together with proteins forms the structure of ribosomes |
neonate | A newborn infant, especially one less than four weeks old |
mantle | the middle layer of the Earth, lying just below the crust and consisting of relatively dense rocks |
ectomycorrhiza | A type of mycorrhiza in which the mycelium fonns a dense sheath, or mantle, over the surface of the root |
odontophore | a tooth-bearing structure found in most mollusks, except bivalves |
amorphous | lacking a distinct form or shape |
periphery | the outermost part or region within a precise boundary |
spin-off | separating a smaller unit from an established company, permitting each company to retain focus while shielding the parent from risk and granting the spin-off the administrative benefits of small size. |
estimator | in statistics, an estimator is a function of the known data that is used to estimate an unknown parameter |
stratify | Arrange in groups by age, sex, etc., for analysis |
neural | Brain or nerves |
metanephridium | a type of excretory tubule in annelid worms |
gluconeogenesis | The synthesis of glucose. |
mutator | An allele that causes an increased mutation rate. |
organized territory | a United States insular area for which the United States Congress has enacted an organic act |
gram-negative organism | Any prokaryotic organism that does not retain the first stain (crystal violet) used in Gram's staining technique |
infarct | Death of tissue due to loss of blood flow |
evolution | of the many meanings of this word, three are used here: (1) change over time; the fact that most of the organisms alive today are different from organisms that existed in the past; (2) universal common descent; the hypothesis that all organisms are modified descendants of a single common ancestor in the distant past; (3) the mechanisms of biological change; the hypothesis that natural selection acting on random variations has been the principal cause of modification. |
hla | Abbreviation for human leukocyte-associated antigen. |
phytoplankton | microscopic green plant component of the plankton which is responsible for most of the photosynthetic activity in the ocean |
hypocenter | the point under the earth's surface where the energy of an earthquake is first released |
carbonation | Is a form of chemical weathering where carbonate and bicarbonate ions react with minerals that contain calcium, magnesium, potassium, and sodium. |
mini-atoll | a ring-shaped patch reef with a central area (lagoon) containing sand |
thematic map | Map that displays the geographical distribution of one phenomenon or the spatial associations that occur between a few phenomena |
unipotency | Capable of making only a single type of cell |
leaf drip | The rain water that fall to the ground surface from plant leaves after it has been intercepted by these structures. |
raw sewage | untreated domestic or commercial waste water |
eddy | a circular movement of water formed on the side of a main current |
pod | a group of aquatic mammals |
isolated | An abnormality that occurs in the absence of other systemic involvement |
convectional precipitation | Is the formation of precipitation due to surface heating of the air at the ground surface |
catadromous species | a species that spawns in the ocean but lives parts of its life in fresh water, e.g., American eel |
lungfish | Common name for members of the Dipnoi subdivision of Choanichthyes, fishes that date back to the Devonian |
cost-benefit analysis | an assessment of the short-term and long-term costs (losses) and benefits (gains) that arise from an economic decision |
postulate | a statement accepted without proof; a fundamental assumption |
tumor | A mass that forms within otherwise normal tissue, caused by the uncontrolled growth of a transformed cell. |
groundwater flow | Underground topographic flow of groundwater because of gravity. |
injection | use of a syringe and needle to deliver medications to the body (also called a "shot"). |
symptomatic | showing outward signs of a condition |
pangaea | Pangaea is the name given to the lands of the earth at the time when they came together to form one continent millions of years ago |
ecosophy | ecological philosophy; a set of ethics related to ecological and environmental matters; It refers to philosophies which have a predominant ecocentric or biocentric perspective |
cell | Life's fundamental unit of structure and function. |
population | a group of individuals of one species, found within a particular area. |
pressure | Is defined as the force acting on a surface from another mass per unit area. |
core | The core is a layer rich in iron and nickel found in the interior of the Earth |
primary pollutant | Air pollutants that enter the atmosphere directly |
troposphere | Layer in the atmosphere found from the surface to a height of between 8 to 16 kilometers of altitude (average height 11 kilometers) |
discovery rights | selling only research findings while keeping rights to all the knowledge that is uncovered along the way. |
balanced polymorphism | A type of polymorphism in which the frequencies of the coexisting forms do not change noticeably over many generations. |
coral reef | Ridge of limestone found generally below the ocean surface |
sister chromatid | The two copies of a chromosome after it has been replicated. |
variance | the population variance of a random variable is a non-negative number which gives an idea of how widely spread the values of the random variable are likely to be; the larger the variance, the more scattered the observations on average |
osteoclast | A mononucleate macrophage that breaks down the bone matrix and plays a role in bone remodeling. |
cymbiform | boat-shaped |
kame terrace | A long flat ridge composed of glaciofluvial sediment |
evolvability | Ability to generate heritable variation that can be exploited by selection. |
ovaries | Female sex glands that release the egg cells |
bootstrap | A type of statistical analysis that is generally used for measuring the reliability of a sample estimate. |
genetic determinism | Determinism is the doctrine that all acts, choices and events are the inevitable consequence of antecedent sufficient causes |
threatened species | Species that is still plentiful in its natural range but is likely to become endangered because of declining population numbers. |
cosmopolitan | having a global distribution |
shield | A large stable area of exposed very old (more than 600 million years) igneous and metamorphic rock found on continents |
genome | The entire number of genes |
anteroposterior axis | the longitudinal axis of an animal, from head to tail |
geologist | A geologist is someone who works in the field of geology, which is another word for the study of the earth |
consexual | of the same sex |
rehabilitation | the recovery of specific ecosystem components in a degraded ecosystem or habitat |
rugose | having a rough or ridged surface |
sex chromosomes | the chromosomes that determine the sex of an organism |
mosaic | A situation where some cells have an abnormal or unusual genetic or chromosomal makeup while the rest of the cells in the body have the usual genetic or chromosomal constitution |
cusp | a point or projection on a tooth |
compass | Navigation instrument that uses the Earth's magnetic field to determine direction. |
statistical bias | in statistics, a difference between the expected value of an estimator and the population parameter being estimated |
simple-sequence repeat | Member of a class of repeated DNA sequences consisting of tandem arrays of thousands of copies of short sequences. |
enu | Ethylnitrosourea |
tide tables | tables which give daily predictions of the times and heights of high and low waters |
equinox | either of the two times during a year when the sun crosses the celestial equator and the length of day and night are equal |
plate like | resembling thin, flat sheets of uniform thickness |
plenary powers | in taxonomy, the International Commission on Zoological Nomenclature (Commission) is empowered by use of its Plenary Powers to prevent the application of a rule of the International Code of Zoological Nomenclature (Code) where such application in a particular case would disturb the stability or universality or cause confusion in zoological nomenclature |
bar and spit | a low accumulation of sand or sediments forming an intertidal or subtidal extension of a reef islet |
specific heat | The amount of heat that must be absorbed or lost for 1 g of a substance to change its temperature 1°C. |
galaxy | An assemblage of millions to hundreds of billions of stars. |
doppler radar | radar that can measure radial velocity, the instantaneous component of motion parallel to the radar beam (i.e., toward or away from the radar antenna) |
aggregate | a collection of units or particles forming a body or mass (noun); to form such a body or mass (verb) |
temporary threshold shift | in mammals, a temporary increase in the threshold of hearing (minimum intensity need to hear a sound) at a specific frequency that returns to its pre-exposure level over time |
numerical aberration | A change in the number of chromosomes from the wild-type number in the absence of any chromosome rearrangement.See also: |
karyotype | A display of the chromosomes of an individual, showing number and morphology. |
storm track | The path taken by a storm (thunderstorm, mid-latitude cyclone or hurricane) or the average path taken by storms. |
inoceramid | Any member of a group of oyster-like, large, bivalved mollusks abundant during the Jurassic and Cretaceous. |
diurnal | /die-ERN-əl/ adj |
dacryagogue | /DACK-ree-ə-goag/ n |
nddsa | The National DNA Database of South Africa, established in terms of section 17H of the South African Police Service Act. |
climax community | Plant community that no longer undergoes changes in species composition due to succession. |
gross photosynthetic rate | the total rate of CO2 fixation with no allowance for the CO2 simultaneously lost during respiration |
richter scale | a logarithmic scale that measures the amount of energy released during an earthquake on the basis of the amplitude of the highest peak recorded on a seismogram |
epitoky | a mode of reproduction unique to polychaete worms in which the worm undergoes a partial or entire transition into a pelagic, sexually reproductive form, known as an epitoke |
double helix | the structure of DNA |
groundwater | Water that occupies the pore spaces found in some types of bedrock. |
cell | The basic unit of any living organism |
analysis of covariance | an analysis of variance in which the data are adjusted or controlled for the presence of one or more other variables |
monopectinate gill | in mollusks, refers to having gill lamellae on one side of the ctenidial axis |
cenozoic | Geologic era that occurred from 65 million years ago to today. |
epithet | the second name of the binomial given to a species; the species name or second part of a Latin binominal |
shear stress | Stress caused by forces operating parallel to each other but in opposite directions. |
computed tomography | An X-ray procedure that uses a computer to produce detailed 3-dimensional or cross sectional pictures of the body |
front | Transition zone between air masses with different weather characteristics. |
megafauna | refers to animals greater than 20 cm in size |
holothurian | a sea cucumber in the echinoderm class Holothuroidea |
conserved name | in taxonomy, a name otherwise unavailable or invalid that the International Commission on Zoological Nomenclature, by the use of it Plenary Power, has enabled to be used as a valid name by removal of the known obstacles to such use |
territory | an area over which an animal establishes jurisdiction |
undercurrent | a current below another current, or beneath the surface |
punctuated equilibrium | an evolutionary model in which change occurs in relatively rapid bursts, followed by little or no discernible change in a lineage (stasis) |
bioinformatics | the application of information technology to manage and analyze the vast amounts of data generated from biological research. |
mosasaur | Any member of a group of large, extinct, predaceous marine reptiles that appeared late in the Cretaceous and became extinct at the end of the period |
embryo sac | The female gametophyte of angiosperms, formed from the growth and division of the megaspore into a multicellular structure with eight haploid nuclei. |
gladiate | sword-shaped |
complexity | The term "low complexity sequence" may be thought of as synonymous with regions of locally biased amino acid composition |
hydrophilic | Having an affinity for water. |
bifurcate | a coral branch that divides into two equal branches |
alleles | Alternative forms of a genetic |
phase i clinical trials | Establish the best way to give a new treatment to humans after it has been studied in the laboratory |
hormone | A substance produced in particular cells (for example, in a gland) that can travel to other parts of the body and (often in very small quantities) influence those other parts |
marine sanctuary | as defined by the U.S |
mammalogy | the scientific study of mammals |
allele | A different form of a gene at a particular locus |
mud | a fine sediment often associated with river discharge and buildup of organic material in areas sheltered from high-energy waves and currents |
collection | an assemblage of specimens compiled and maintained for purposes of study and/or display |
heterozooid | a specialized non-feeding bryozoan zooid |
character | In the context of evolution and development, a "character" refers to a more or less discrete trait (feature) of an organism at any level of observation, from the molecular to the visible |
neutrino | a lepton with no electric charge |
homonym | in taxonomy, each of two or more identical but independently proposed names for the same or different taxa |
hereditary disease | A condition that is genetically passed down from parent to child. |
principal component analysis | Visual and numerical analysis of collinearity among variables |
dmso | Dimethyl sulfoxide. |
feral | existing in a wild or untamed state.The term is often used to describe an animal which has reverted to such a state from domestication |
metric character | Characteristics that are measures not counts (e.g., height of an individual) |
allosteric interaction | See allostery. |
climate | long-term characteristics of weather |
legally authorized representative | A legally authorized representative as an individual or judicial or other body authorized under applicable law to consent on behalf of a prospective subject to the subject?s participation in the procedure(s) involved in the research. |
sex-linked genes | Genes which are present on the sex chromosomes. |
icelandic low | Subpolar low pressure system found near Iceland |
reflected wave | A water wave that reflects off the shore or another obstacle and is redirected towards the sea or lake. |
world conservation union | the name of the IUCN used since 1990 |
cytoskeleton | Filamentous structures which are responsible for cell shape |
decomposers | See: saprophyte. |
pleomorphic | variable in size and shape; polymorphic, occurring in more than one morphological form |
labyrinthulid | Member of a phylum of eukaryotes in the heterokont kingdom. |
continental crust | Granitic portion of the Earth's crust that makes up the continents |
atmospheric pressure | the pressure of the atmosphere at any given altitude or location; it is synonymous with barometric pressure |
seamount | a submarine mountain, usually conical in shape and volcanic in origin, that rises 1000 meters or more above the sea floor |
occlusion | Closing, obstruction, blockage |
insulin | A hormone that promotes the conversion of glucose to glycogen. |
falsifiability | A measure of whether the results of a method allow one to determine if assumptions used have been violated. |
hyoid | having a "U" shape |
dna marker | A gene or other fragment of DNA whose location in the genome is known. |
glossary | an alphabetical list of technical terms, with brief definitions for those terms, in some specialized field of knowledge |
taro | a tropical food plant whose potato-like root is the basis for poi, a staple of Polynesian cooking |
somnolence | Sleepy |
achelate | lacking a claw or pincer-like structure |
ctene | the locomotor structure of ctenophores (comb jellies) made up of cilia arranged into flattened plates |
cerebrospinal fluid | Blood-derived fluid that surrounds, protects against infection, nourishes, and cushions the brain and spinal cord. |
allele | an alternative form of a gene; any one of several mutational forms of a gene. |
grade | Group of animal species that share the same level of organizational complexity |
frequency spectrum | The distribution of allele frequencies. |
bicuspid | having two cusps or points |
pre-initiation complex | However, more recent research is showing that the word "general" is a misnomer; these factors can be more or less specific, playing different roles with different genes, or different classes of genes |
snowball earth hypothesis | The hypothesis that glaciers covered the planet's landmasses from pole to pole 750-570 million years ago, confining life to very limited areas. |
polar-orbiting satellite | a satellite traveling in a near-polar orbit around the globe; civilian satellite program managed and operated by NESDIS |
cnidoglandular band | the distal rim or free margin along a cnidarian mesentary |
ultrasound | The use of sound waves for visualizing body tissues and structures |
hydrolysis | The rupture of a chemical bond by a reaction that involves water. |
in syn. | in synonymy (in synonymis) |
euchromatin | Chromatin in its less condensed, more open and accessible, and (often) more actively transcribed state, typically richer in genes |
telomere | the terminal part of a eukaryotic chromosome |
prostomium | the anteriormost, presegmental region of the body of an annelid worm, sometimes bearing eyes and antennae; the portion of the head in annelids that is situated anterior to the mouth |
coelozoic | living in the lumen of a hollow organ, such as the intestine, gall bladder, urinary tract, etc |
notochord | A longitudinal, flexible rod that runs along the dorsal axis of an animal's body in the future position of the vertebral column. |
platform reef | a large reef of variable shape lacking a lagoon, seaward of a fringing reef and/or a barrier reef, for which the width is more than half its length |
production efficiency | The fraction of energy stored in food that is not used for respiration. |
cell | The smallest living unit |
plica | a small fold in the skin |
akinesia | Inability to move ("freezing") or difficulty in initiating or maintaining a body motion |
sex chromosome | Chromosome associated with the determination of sex. |
multiplex families | Families in which two or more individuals are affected by the same disorder. |
diotic | /die-AWT-ick/ adj |
wall | the reef slope, which may suddenly drop off into deeper water, forming a nearly vertical wall |
littoral zone | In a lake, the shallow, well-lit waters close to shore. |
convergence | The process by which features with no common ancestry become similar as a result of selection. |
carbonate platform | a broad, flat, shallow, submarine expanse of carbonate rock |
congruence | Agreement among data or data sets. |
exponential distribution | A continuous distribution with density λ exp(λx) |
preformation | The view that an embryo develops through the unfolding of preexisting form |
mutagens | substances which increase the likelihood of mutations. |
acumen | the pointed tip of the rostrum in decapod crustaceans |
nuclear magnetic resonance | The absorption of electromagnetic radiation (radio waves), at a specific frequency, by an atomic nucleus placed in a strong magnetic field; used in spectroscopy and in magnetic resonance imaging. |
heterauxesis | disproportionate growth of a structure in relation to the rest of the body |
orgasm | Rhythmic, involuntary contractions of certain reproductive structures in both sexes during the human sexual response cycle. |
duct | /dəkt/ n |
cell | Fundamental structural unit of all life |
indolent | Slow growing |
selection response | The change in mean trait value over one generation. |
restoration monitoring | the systematic collection and analysis of data that provides information useful for measuring restoration project performance at a variety of scales (locally, regionally, and nationally), determining when modification of efforts is necessary, and building long-term public support for habitat protection and restoration |
hair cell | A type of mechanoreceptor that detects sound waves and other forms of movement in air or water. |
immune response | The immune response is the reaction of the body to substances that are foreign or treated as foreign |
quasi | as if; seemingly; in a manner |
hard bottom | a substrate formed by the deposition of calcium carbonate by reef building corals and other organisms or existing as bedrock or volcanic rock usually of minimal relief |
volcanic vent | An opening on a volcano through which lava is released and rock fragments and ash are ejected. |
tidal inlet | a waterway from the open ocean into a lagoon |
antidote | A substance that counteracts the effects of a poison. |
milky way galaxy | Aggregation of about 400 billion stars in a flattened, disk-shaped structure in space |
seawifs | Sea-viewing Wide Field-of-view Sensor carried on the SeaStar satellite |
splenomegaly | Enlargement of the spleen. |
terminal velocity | Maximum speed that can be achieve by a body falling through a fluid like water or air. |
aerobic respiration | a form of respiration in which molecular oxygen is consumed and carbon dioxide and water are produced |
antennae | Long, paired sensory appendages on the head of many arthropods. |
benthic chamber | an open-bottom container (usually constructed of acrilic) that encloses an area of sediment/substratum and overlying water |
proteinaceous | any structure composed of proteins |
empowerment | Having the right to make one's own choices and having the ability to act on them. |
telomere | A specialized structure at the ends of linear chromosomes in eukaryotes |
directional asymmetry | a pattern of deviation with a side bias |
ambush predator | a predator that hides and waits for prey to pass in close proximity rather than actively hunting for it |
quantitative analysis | the analysis of a phenomenon that uses environmental variables represented by numbers or ranges, often accomplished by numerical modelling or statistical analysis |
erosional landform | Is a landform formed from the removal of weathered and eroded surface materials by wind, water, glaciers, and gravity |
meltwater | Water produced from the melting of snow and/or glacial ice. |
greenhouse effect | The tendency for certain gases, such as carbon dioxide and methane, to trap heat at the Earth's surface by reducing outgoing long-wave radiation |
limbic system | A group of nuclei (clusters of nerve cell bodies) in the lower part of the mammalian forebrain that interact with the cerebral cortex in determining emotions; includes the hippocampus and the amygdala. |
dacryorrhea | /dack-ree-oh-REE-ə/ n |
tornado watch | A forecast issued to the public that a tornado may occur in a specified region. |
dermal | pertaining to or affecting the skin |
guard cells | The two cells that flank the stomatal pore and regulate the opening and closing of the pore, |
bilateral symmetry | Characterizing a body form with a central longitudinal plane that divides the body into two equal but opposite halves. |
congression | The uptake of more than one transforming DNA fragment by a single competent cell (occurs most often when a high concentration of transforming DNA is available). |
intersexual selection | Selection whereby individuals of one sex (usually females) are choosy in selecting their mates from individuals of the other sex; also called mate choice. |
prophyll | A leaf formed at the base of a shoot, usually smaller than those formed subsequently. |
twinning | see gemellity. |
molar | a large flat or ridged-topped tooth adapted for crushing or grinding |
anticyclone | an area of high pressure |
triaxon | in sponges, a spicule with three rays |
proximal | Near; close to the center of the body; |
encryption | a process that transforms plain text or data and makes it unreadable to an outside party |
morbidity | Sickness/illness; undesired result or complication |
t-tests | Statistical tests that are used to determine a statistically significant difference between two groups by looking at differences between two independent means. |
ribosome | A particle composed of RNA and proteins that is the site of protein synthesis. |
binding | the ability of molecules to stick to each other because of the exact shape and chemical nature of parts of their surfaces |
earth revolution | Refers to the orbit of the Earth around the Sun |
nascent | commencing development; immature; coming into existence; emerging |
kegg | The |
fresh water | Water that is relatively free of salts. |
articular | pertaining to a joint |
plastic deformation | Irreversible change in the shape of a material without fracture as the result of the force of compression or expansion. |
kin selection | A phenomenon of inclusive fitness, used to explain altruistic behavior between related individuals. |
icosahedral | a many sided, three dimensional, hexagonal shape made up of many small triangles |
movement disorders specialist | A neurologist with specific training in the subspecialty of movement disorders |
photoperiod | The duration of the daylight period. |
dl | Deciliter. |
'blood' relatives | Relatives that have a true genetic relationship, and are either related directly or through recent common ancestors. |
pollutant | A substance that has a harmful effect on the health, survival, or activities of humans or other living organisms. |
translation | protein synthesis; the conversion of information from mRNA into a protein. |
mss | a scanner system that simultaneously acquires images of the same scene in various wavelength bands |
monoclonal antibody drugs | An antibody preparation which is genetically homogenous and may be directed at a specific feature of the cancer cell. |
bilateria | group containing all multicellular animals with bilateral symmetry; the name has no taxonomic status |
endoscopic | Examination of the inside of the body with a lighted tube |
drupella | a genus of Indopacific muricid gastropod that preys almost exclusively on living coral tissues |
placodont | Any member of a group of aquatic reptiles from the Triassic |
ma-plot | MA-plot is used to detect artefacts in the array that are intensity dependent |
multiple-hypothesis testing | Testing more than one hypothesis within an experiment |
dispersion | The distribution of individuals within geographical population boundaries. |
institutionalized | Confined, either voluntarily or involuntarily (e.g., a hospital, prison, or nursing home) |
styliform | having the shape of a pointed rod |
dvd-ram | a high-capacity, high-performance optical disk that allows data to be read, written, and erased |
mismatch distribution | The distribution of numbers of differences between random pairs of sequences sampled from a population. |
epoch | The fourth largest division of the geologic time scale, subdivision of a period |
hygroscopic coefficient | Maximum limit of hygroscopic water around the surface of a soil particle. |
columnar colony | a coral colony formed into one or more columns |
tactile | pertaining to information, interpretations, and behavior derived from the sense of touch |
marsh | a soft, wet area periodically or continuously flooded to a shallow depth, usually characterized by a particular group of grasses, cattails and other low plants |
water strider | an insect (a bug) in the order Hemiptera |
paralogy | The relationship of any two homologous characters that arose by a genetic duplication |
microfauna | animals which are invisible, or nearly so, to the naked eye |
era | a division of geologic time next smaller than the eon and larger than a period |
biorocktm | Biorock Technology, or mineral accretion technology is a method that applies safe, low voltage electrical currents through seawater, causing dissolved minerals to crystallize on structures, growing into a white limestone similar to that which naturally makes up coral reefs |
wildcard | A wildcard is a character that may be used in a search term to represent one or more other characters. |
cluster analysis | a multivariate statistical technique for solving classification problems |
flabellate | fan-shaped |
fishery closure area | a fishery which is closed or restricted by a government entity |
nictitating eyelid | a movable eyelid found in sharks that can be closed over the eye to protect it from damage |
muon | a charged lepton about 200 times more massive than an electron; an elementary particle with a negative charge and a half-life of 2 microsecond; decays to electron and neutrino, and antineutrino |
histosol | soil with a high organic content |
panmictic | refers to random-mating populations; one in which all members are equally likely to interbreed |
basement rock | a complex of metamorphic and igneous rocks that underlies sedimentary deposits |
polytene chromosome | A chromosome that consists of large numbers of parallel DNA strands, making their structure clearly visible. |
efficacy | Effectiveness; how well something works |
stratus clouds | Low altitude gray colored cloud composed of water droplets |
jaundice | A yellowing of the skin and whites of the eyes |
isogamous | Producing a single kind of gamete. |
violet | bluish purple color |
bristle | a stiff, coarse, hair-like structure |
analysis of variance | a statistical technique for testing for differences in the means of several data populations |
flower | In an angiosperm, a short stem with up to four sets of modified leaves, bearing structures that function in sexual reproduction |
flipper | the phenomenon in which the sex of the offspring is determined by environmental factors |
herbicide | a weed killer used in the production of crops. |
kinetic energy | The energy of motion, which is directly related to the speed of that motion |
caecum | a blindly ending sac arising from the gut or some other hollow organ |
tus | transcriptional units |
ice age | A period of time during which glaciers expand and cover more of the Earth's surface |
tessellated | a checkered appearance |
subterminal | located some distance away from the end |
extratentacular budding | an asexual form of reproduction where daughter corallites grow from the outside wall of the parent corallites |
nodule | a swollen, knob-like structure |
ethics/ethical behaviour | Code of behavior considered correct; especially that of a particular group, profession or individual. |
amural form | a coral growth form in which the corallite walls are partially or wholly lost; the septa stay unreduced |
standard deviation | Measure of variability, obtained as the square root of the variance |
type series | in taxonomy, the series of specimens which either constitutes the name-bearing type (syntypes) of a nominal species or subspecies or from which the name-bearing type has been or may be designated |
drought | Climatic condition where water loss due to evapotranspiration is greater than water inputs through precipitation. |
decibel | unit for measuring sound intensity |
urban area | Geographic area with a high density of people over a limited area |
sex-linked genes | Genes located on one sex chromosome but not the other. |
psammon | organisms growing on, in, or moving through sand; interstitial organisms |
pallidotomy | A surgical procedure in which lesions are produced in the globus pallidus region of the brain in an effort to lessen Parkinson's symptoms such as tremors, rigidity, and bradykinesia |
chronometer | an instrument for measuring time |
stellate | star-shaped |
fimbriate | a structure that is fringed at the margin |
threatened species | Species that are likely to become endangered in the foreseeable future throughout all or a significant portion of their range. |
achromic | unpigmented; without color |
coalescent process | A model in which as one moves back in time, each pair of lineages coalesces at a rate 1/2Ne. |
surge | A large, destructive ocean wave caused by very low atmospheric pressure and strong winds |
cell | The basic structural and functional unit of life. As humans, we are made of approximately 50 trillion cells! |
reef | A ridge of rocks found in the tidal zone along a coastline |
vermivore | an animal which feeds upon worms and worm-like animals |
diplophase | /DIP-low-faze/ n |
kettle moraine | An area of glaciofluvial influenced moraine deposits pitted with kames and kettle holes. |
regolith | the layer of loose rock, resting on the bedrock, that constitutes the surface of most land areas |
dyad | /DIE-ad/ n |
atresia | an abnormal condition in which a normal opening or tube in the body is closed or absent |
cyclone | an area of low pressure |
microhabitat | a smaller part of a habitat that has some internal interactions allowing it to function self-sufficiently within a generally larger habitat, such as a patch reef in a lagoon |
nucleotide bases | or "letters" |
approximate | in morphlogy, placed close together |
taxon | A classification category for a group of organisms. |
remote sensing | the collection of information about an object or event without being in physical contact with the object or event |
subpopulation | a well-defined set of interacting individuals that compose a proportion of a larger, interbreeding population |
serehd | the serehd or Pohnpei Lory (trichoglossus rubiginosus) is a small, brightly colored parrot indigenous to Pohnpei Island in the Federated States of Micronesia |
hybrid rescue allele | An allele that alleviates hybrid sterility or inviability. |
sex determination | the mechanism in a given species by which sex is determined; in many species sex is determined at fertilization by the nature of the sperm that fertilizes the egg. |
rejected name | in taxonomy, a name which, under the provisions of the International Code of Zoological Nomenclature, cannot be used as a valid name and which is set aside in favor of another name |
night sweats | Profuse sweating during the night. |
glutamate | A neurotransmitter that is normally involved in learning and memory |
florida reef tract | the third largest barrier reef in the world, running from the Miami area southwest to the Dry Tortugas |
isoamyl alcohol | A chemical used in organic extractions to reduce the foaming of reagents, making it easier to detect the interface between the organic and aqueous phases. |
split spawning | spawning occurring over consecutive nights or consecutive lunar cycles within a reef |
nonvascular plant | a plant which lacks tissues to conduct water and nutrients |
science | a method of learning about the physical universe by applying the principles of the scientific method, which includes making empirical observations, proposing hypotheses to explain those observations, and testing those hypotheses in valid and reliable ways; also refers to the organized body of knowledge that results from scientific study |
seismic wave | Successive wave-type displacement of rock usually caused by an earthquake. |
phyllosoma larva | a larval stage of a spiny lobster |
ionizing radiation | The emission of alpha or beta particles or gamma rays from radioisotopes |
phylogeography | The principles and processes governing geographical distributions of genealogical lineages, especially at the intraspecific level. |
cellular immunity | Immune protection provided by the direct action of immune cells (as distinct from soluble molecules such as antibodies). |
acidic | having a pH of less than 7 |
simulation | An emulation of biological systems with predictive value for research; a virtual biological system. |
capillary action | the means by which liquid moves through the porous spaces in a solid, such as soil, plant roots, and capillary blood vessels due to the forces of adhesion, cohesion, and surface tension |
iridescent | exhibiting rainbow colors |
convertibles | Securities (usually bonds or preferred shares) that can be converted into common stock. |
neurofilament | A type of intermediate filament that supports the axons of nerve cells. |
null hypothesis | The hypothesis that is being tested in a statistical test |
primary germ layers | The three layers (ectoderm, mesoderm, endoderm) of the late gastrula, which develop into all parts of an animal. |
cirrocumulus clouds | Patchy white high altitude cloud composed of ice crystals |
compound | a material made up of two or more elements combined in a fixed ratio |
standing stock | the total mass of organisms comprising all or part of a population or other specified group or within a given area; measured as volume, mass, or energy; biomass |
climograph | Two dimensional graph that plots a location's air temperature and precipitation on times scales that range from a 24 hour period to a year. |
fatigue | a lack of energy, general tiredness. |
5 x 10^-8 | is generally used to claim statistical significance |
papilla | a raised bump or nipple-like projection on a tissue surface; a cellular outgrowth |
morgan | Recombination distance of 100 percent |
polymorphism | The existence of more than one form of a genetic trait. |
heritability | In the 'narrow sense', the ratio of the additive genetic variance (differences that will be inherited consistently by the offspring) to the total phenotypic variance. |
zooxanthellate coral | a coral that has zooxanthellae in its tissues |
dyspnea | /disp-NEE-yə/ n |
s | See selection coefficient. |
papillose | covered with papillae |
eutrophic lake | Lake that has an excessive supply of nutrients, mostly in the form of nitrates and phosphates |
inflorescence | Structure including flowers in the angiosperm. |
drainage wind | A wind common to mountainous regions that involves heavy cold air flowing along the ground from high to low elevations because of gravity |
effective population size | An estimate of the size of a population based on the numbers of females and males that successfully breed; |
fragmentation | A means of asexual reproduction whereby a single parent breaks into parts that regenerate into whole new individuals |
intersex | an organism which possesses a mixture of male and female characteristics |
tandem repeats | A series of repeated sequences, arrayed next to each other. |
high-resolution satellite sst climatology | 9 km monthly or yearly averages of satellite-derived (see AVHRR) sea surface temperatures obtained over periods of 10 years or longer |
hormona | A substance produced by a tissue and conveyed by the bloodstream to another to affect the physiological activit. |
alien species | a species which does not naturally occur within an area and which has usually arrived as a result of deliberate or accidental human intervention |
groin | a solid structure built at an angle from a shore prevent erosion from currents, tides and waves, or to trap sand |
ostium | in sponges, a microscopic pore through which water enters the sponge body |
trawler | a fishing vessel that tows an open-mouthed fishing net drawn along the sea bottom or in the water column |
a file format created by Adobe, initially to provide a standard form for storing and editing printed publishable documents | |
biotite | Rock forming mineral of the mica group. |
purse seine | a fishing net used to encircle surface schooling fish |
infusion | A means of delivering treatment to people with bleeding disorders intravenously |
latitude | the angular distance between an imaginary line around the Earth, or any spherical body, parallel to its equator and the equator itself; an imaginary line around the Earth parallel to the equator |
dissepiment | a horizontal partition within or outside of a corallite |
generate | To propagate or (mass) proliferate |
endangered species act | an Act of Congress passed in 1966 that establishes a federal program to protect species whose survival is threatened by habitat destruction, overutilization, disease, etc. |
gnathostome | Member of the vertebrate subgroup possessing jaws. |
noise | unwanted sound |
orogenesis | The process of mountain building through tectonic forces of compression and volcanism. |
spot | a circular area of pigment |
gain-of-function mutation | Hypermorphic Mutation |
heterozygosity | The state of being heterozygous. |
composite volcano | Volcano created from alternate layers of flows and exploded rock |
marae | in the Marquesas, a Polynesian sacred enclosure or a place of worship |
correlation coefficient | A statistical measure of the degree of linear relationship between two variables that indicates the strength of that relationship |
tentacular sheath | one of the two cavities in the sides of the body of ctenophores (comb jellies) into which the tentacles can be withdrawn |
menisciform | crescent-shaped |
isozymes | Two or more enzymes capable of catalyzing the same reaction but varying in their specificity due to differences in their structures and hence their efficiencies under different environmental conditions. |
amplification | The strengthening of stimulus energy that is otherwise too weak to be carried into the nervous system. |
h | See gene diversity. |
interoperability | the ability of two or more systems to exchange and mutually use information |
insolation | the amount of solar radiation received on a given body or in a given area |
ozone | Tri-atomic oxygen that exists in the Earth's atmosphere as a gas |
ecto- | a prefix meaning 'outside' |
fahrenheit temperature scale | a thermometric scale on which the freezing point of water is at 32 degrees F (Fahrenheit) above the 0 degree (F) mark on the scale, and the boiling point of water is at 212 degrees F |
upwelling | the process by which warm, less-dense surface water is drawn away from a shore by offshore currents and replaced by cold, denser water brought up from the subsurface |
full thickness | in histopathology, a lesion, wound or process that involves all layers of tissues in a structure |
radiocarbon age | the age of plant or animal remains, determined by measuring the remaining activity of the 14C atoms in the sample: A=A0 e-t where A is the measured activity, A0 is the initial activity, e is the decay constant, and t is the sample age |
crypsis | protective camouflage coloration where the individual resembles its backgound |
directed fishing | fishing that is targeted at a certain species or group of species |
reduction principle | If selection is the only process acting, then the recombination rate will tend to decrease. |
kilobase | A unit of DNA length corresponding to one thousand bases. |
embryoid body | EB |
collateral relationship | Individuals who are only related through common ancestors, e.g |
spectroscopy | The study of molecular or atomic structure of a substance by observation of its interaction with electromagnetic radiation. |
bitmap | a format for storing graphics in an uncompressed manner |
onomatophore | in taxonomy, a specimen which acts as the name bearer; a nomenclatural type (holotype, syntype, lectotype, neotype) |
glume | A leaf- or bract-like structure; specifically one of the two bracts at the base of the spikelet in grass flowers. |
diffusion | /də-FYOO-shən, diff-/ n |
prezygotic isolation | Reproductive isolation that stops production of an F1 zygote by preventing cross-mating. |
karst | a limestone terrain characterized by sinks, caverns, abrupt ridges, protuberant rocks and drainage characteristics due to greater solubility of limestone in natural waters than is common |
lycophyte | Any member of the spore-bearing vascular plant group Lycophyta |
polarized light | light waves which vibrate in one plane only as opposed to the multi-directional vibrations of normal rays |
permeable | having pores or openings that permit liquids or gasses to pass through |
time zone | a region of the Earth that has adopted the same standard time, usually referred to as the local time |
fusiform | a shape that is tapered at both ends; spindle-shaped; torpedo-shaped, like a mackerel |
coagulation | blood clotting. |
covariance | Like correlation, covariance is a measure of the degree to which variables vary together or a measure of the intensity of association. |
distributional limit | Spatial boundary that defines the edge of a species geographical range. |
growth | An increase in cell size or cell number, or both, resulting in an increase in dry weight. |
technology | The application of scientific knowledge for a specific purpose. |
drag | the frictional impedance (retarding force) acting on an object moving through a fluid parallel and opposite to the direction of motion |
neural stem cell | A type of stem cell that resides in the brain that can make new nerve cells (neurons) and other cells that support nerve cells (glia) |
cytoplasmic streaming | A circular flow of cytoplasm, involving myosin and actin filaments, that speeds the distribution of materials within cells. |
cultural evolution | Change in culture (i.e., information passed on by learning and imitation rather than by biological inheritance). |
velarium | a structure that resembles a hydrozoan velum In scyphozoan medusae, but has a different embryonic origin |
conditional mutant | A mutant that can grow under one set (permissive) of environmental conditions but cannot grow under different (restrictive or nonpermissive) conditions |
flange | a projecting rim |
booties | short "boots" usually made of neoprene, worn inside open-heeled fins |
reef | A ridge or mound-like structure, usually of calcium carbonate, built by the accumulation of skeletons of sessile marine organisms, dominantly corals in the present day |
spongistatin | a marine pharmaceutical, extracted from the marine sponge Hyrtios erecta, which has broad-spectrum antifungal activity |
tentacle | a finger-like evagination of the body wall |
ring species | A chain of interbreeding populations whose ends overlap without interbreeding. |
glaucus | A surface with a waxy, white coating |
sibs | An abbreviation for siblings. |
vestigial structure | an incompletely or ineffectively developed structure which is greatly reduced from the original ancestral form and is no longer functional |
algal reef | a reef, usually exposed to wave action, composed of coralline algae and vermatid gastropods |
bigeminal | occurring in pairs |
dysneuria | /dis-NUHR-ee-yə/ n |
balancing selection | Selection that maintains polymorphism. |
baseline data | a quantitative level or value from which other data and observations of a comparable nature are referenced |
milliammeter | an instrument for recording very small electrical currents |
phs | Public Health Service |
cordate | heart-shaped; in the form of two rounded lobes |
rdna | See ribosomal DNA. |
sclerocyte | a cell in sponges that produces spongin or spicules |
dtmp | Thymidine monophosphate. |
allele | one of the variant forms of a gene at a particular locus, or location, on a chromosome |
species | in sexually reproducing organisms, a species is a group of genetically related organisms, usually similar in physical appearance, that actually or potentially interbreed and are reproductively isolated from other groups |
suspension-feeder | An aquatic animal, such as a clam or a baleen whale, that sifts small food particles from the water. |
chaparral | A type of plant community common to areas of the world that have a Mediterranean climate (for example, California and Italy) |
upstream | the direction toward the 5’ end of a nucleotide sequence. |
calice | the oral surface of the corallite |
competition | Interaction between members of the same population or of two or more populations using the same resource, often present in limited supply. |
interstices | the openings or pore spaces in a rock, soil, and other such material |
distinct | clearly defined and easily recognized |
endothelium | The innermost, simple squamous layer of cells lining the blood vessels; the only constituent structure of capillaries. |
piebald | with two colors irregularly arranged, usually black and white |
cerebral ganglion | in invertebrates, one of a pair of ganglia (or fused median ganglion) situated in the head or anterior portion of the body;also called the the "dorsal ganglion" or " cerebroganglion" |
structural complexity | as pertaining to coral reef ecosystems, a measure of the amount of coral surface area in relation to linear area |
dynamic instability | The alternation of microtubules between cycles of growth and shrinkage. |
volant | flying or capable of flying |
aposematism | conspicuous warning coloration |
dobson unit | the unit of measure for total ozone or other gases |
fila | a thread-like structure, a filament |
data | multiple facts (usually but not necessarily empirical) used as a basis for inference, testing, models, etc.; the word is plural (sing |
percolation | Vertical movement or infiltration of water from the Earth's surface to its subsurface |
quantum | the smallest ‘unit' of energy |
joule | A unit of energy: 1 J = 0.239 cal; 1 cal = 4.184 J |
dolomite | a sedimentary rock, similar to limestone, composed largely of calcium magnesium carbonate (CaMg (CO3)2) |
chemical equilibrium | In a reversible chemical reaction, the point at which the rate of the forward reaction equals the rate of the reverse reaction. |
subset | in mathematics, a subset of a given set is a collection of things that belong to the original set |
jaccard distance | a statistic which measures dissimilarity between sample sets |
dispersal | The distribution of individuals within geographic population boundaries. |
isoline | a line on a surface connecting points of equal value |
homeotic genes | Genes which determine the shape of the body along the antero-posterior axis of the embryo |
non-mendelian | 1 |
refractory | Not responding to treatment |
depressed | a body shape which is flattened dorso-ventrally, e.g., a ray, skate, monkfish |
neural tube | The embryonic structure which forms into nervous system including the spinal cord and brain. |
helix | A spiral structure with a repeating pattern. |
genotype | Adjective: phenotypic. |
branch length | The length of a particular branch in an evolutionary tree |
triple response | A plant growth maneuver in response to mechanical stress, involving slowing of stem elongation, a thickening of the stem, and a curvature that causes the stem to start growing horizontally. |
adenose | glandular |
selection coefficient | Difference in relative fitness. |
white hole | an area along the spur and groove system (zone) where the sand channel widens considerably |
informed consent | Voluntarily agreeing to do something after receiving and understanding all of the relevant information |
global environment facility | an independent financial organization that provides grants to developing countries for projects that benefit the global environment and promote sustainable livelihoods in local communities |
cirrostratus clouds | High altitude sheet like clouds composed of ice crystals |
winter | Season between fall and spring |
hydraulic gradient | The slope of the water table or aquifer |
auxotroph | A mutant that cannot grow on the minimal medium on which a wild-type member of the same species can grow. |
tblastx | A BLAST program that translates the query nucleotide sequence in all six possible frames and compares it against the six-frame translations of a nucleotide sequence database |
bitmap image | also called raster or paint images |
velocity centrifugation | The separation of particles based on their rates of sedimentation. |
population dynamics | the study of the factors that affect the growth, stability, and decline of populations, as well as the interactions of those factors |
bleaching index | index based on the strength and duration of local HotSpots to monitor bleaching events |
acerose | having a sharp, rigid point |
fjord | a deep-water inlet, carved out by glacial action and usually surrounded by mountains or steep slopes |
darwin | A unit for the rate of change of morphology |
sm protein | A protein that belongs to a group of seven core proteins that are common to the splicing small nuclear ribonucleoprotein particles (except for U6 and U6atac, which have Sm-like proteins) |
allele | Any of several alternative forms of a gene located at the same point on a particular pair of chromosomes |
otu | See operational taxonomic unit. |
wright–castle estimator | A method for estimating the number of genes that influence a quantitative trait |
mammalian dive reflex | the physiological responses, including bradycardia and shutdown of the peripheral circulation, which occurs during dives by an air-breathing vertebrate |
sbt | See shifting balance theory. |
autozooecium | a tube that encloses a bryozoan autozooid |
antipodal | diametrically opposite; located on the opposite side |
genotypic variance | The variance of the genotypic value: var(G)= VG. |
incisiform tooth | a chisel-shaped tooth used for cutting |
water table | the level below the earth's surface at which the ground becomes saturated with water |
hypothesis | A tentative assumption that is made for the purpose of empirical scientific testing |
offshore wind | a wind blowing seaward from the land in the coastal area. |
rare | a U.S.-based conservation organization that works globally to equip people in the world's most threatened natural areas with the tools and motivation they need to care for their natural resources |
microsmatic | pertains to animals with a poorly developed olfactory (smell) sense |
transcript profiling | see transcripomics |
evolutionary tree | a lineage designed to show the evolutionary history of relationships among groups of organisms |
quadrate | square-shaped |
disaccharides | n |
population | A group of individuals residing in a given area at a given time. |
logarithmic phase | the steepest slope of the growth curve of a culture; the phase of vigorous growth during which cell number doubles every 20-30 minutes; also called 'log or exponential growth phase' |
positive allometry | allometric relationship in which the slope of the line comparing two variables is greater than unity |
malacology | the scientific study of mollusks |
category | in taxonomy, any rank within the classification hierarchy, e.g., family, subfamily, subspecies |
climate variability | changes (variability/trends) in the long-term characteristics of weather |
polymorphism | Difference in DNA sequence among individuals that may underlie differences in health |
gel | a jelly-like substance formed by the coagulation of a colloidal liquid; a cytoplasmic phase |
decibel | a logarithmic scale used to denote the intensity (loudness), of a sound relative to the threshold of human hearing |
onshore | a direction landward from the sea |
basic research | aimed at gaining more comprehensive knowledge or understanding of the subject under study, without specific applications in mind |
codon | "Words" of the genetic code consisting of three successive nucleotide bases, or "letters" |
chromosome | A rod-like structure found in the cell nucleus |
p-value | The probability, were the null hypothesis true, of obtaining results that are as discrepant or more discrepant from those expected under the null hypothesis than those actually obtained. |
mesotrophic lake | Lake with a moderate nutrient supply |
reef crest | the sharp break in slope at seaward margin or edge of reef flat |
insight learning | The ability of an animal to perform a correct or appropriate behavior on the first attempt in a situation with which it has had no prior experience. |
cytoplasmic genes | DNA-containing bodies in the cell but external to the nucleus |
step relatives | Non-blood relatives brought in as a result of remarriage |
ct scan | computerized series of x-rays |
methane | Methane is very strong greenhouse gas found in the atmosphere |
membrane | A membrane is a thin, film-like structure that separates two fluids |
caldera | A large circular depression in a volcano. |
style | The long structure between the stigma and ovule in a flower |
viral inactivation | methods that kill viruses in clotting factors |
stem cell collection | See Apheresis. |
peri | a prefix meaning "around" |
reflex | An automatic reaction to a stimulus, mediated by the spinal cord or lower brain. |
fish | Group of vertebrate animals that inhabit aquatic habitats. |
axial | refers to the head and trunk of an individual |
environmental impact statement | a key component of an environmental impact assessment |
outlying area | the term 'outlying area' refers to the United States Virgin Islands, Guam, American Samoa, and the Commonwealth of the Northern Mariana Islands |
third party defense motion | A motion filed by the prosecution to preclude the defense from asserting that DNA evidence is derived from a third party, possibly a relative of the accused. |
flocculation | Chemical processes where salt causes the aggregation of minute clay particles into larger masses that are too heavy to remain suspended water. |
cell | The basic unit of any living organism. |
game species | species of animals that are hunted or fished, for purposes of sport, recreation, and food capture |
chela | a pinching claw of a decapod crustacean, composed of a moveable finger, the dactylus, and a fixed finger, a distal extension of the propodus |
probability density | The probability that a random variable is in a small interval of size δx is equal to the probability density multiplied by δx. |
allele | Any of several alternative forms of a gene. |
dbs | Abbreviation for "Deep Brain Stimulation." For more information see what patients on our Patient Council have to share on the topic of DBS and late stage treatments. |
reef | a ridge of rocks, sand, or coral that rises to or near the surface of a body of water; to partially lower a sail so that it is not as large |
bathymetry | the study and mapping of sea floor elevations and changes in water depth due to structures that rise up into the water column. |
chi-square test | a statistical test based on the comparison of a test statistic to a chi-square distribution |
velum | a circular shelf of tissue attached to the underside of the umbrella in a hydrozoan mesusa |
stalked eye | an eye carried on the end of a stalk or peduncle |
central nervous system | Central nervous system (CNS) is a term referring to the brain and spinal cord. |
dermographia | /DERM-ə-GRAF-ee-yə/ n |
convection precipitation | precipitation which occurs from convective clouds |
wind | Air moving horizontally and/or vertically. |
receiving waters | water bodies that receive treated or untreated waste waters |
rapacious | grasping, predatory |
gunwale | the upper edge of the side of a ship |
messenger rna | a single strand of RNA that directs protein production. |
tritoniid | a member of a family of nudibranchs (tritoniidae) which feed on soft corals, gorgonians, and other anthozoans |
genus | A taxonomic category above the species level, designated by the first word of a species' two-part scientific name. |
linkage | The frequency of coinheritance of a pair of genes and/or genetic markers, which provides a measure of their physical proximity to one another on a chromosome. |
hydroxylamine | NH2OH |
expected value | in statistics, the mean value calculated for a statistic over an infinite number of samples |
antigens | A substance that when introduced into the body stimulates the production of an antibody |
mucus cell | a cell which secretes mucin, which, when mixed with water forms mucus |
complementary resources | a pair of resources for which consumption by the consumer of one resource reduces its requirement for the other |
consent | Approval or acceptance of something done or proposed by another |
dam | n |
genotypic value | The average trait value G of individuals with a particular genotype. |
wild type | the form of a trait most commonly found in nature; Also, The most common allele for a particular gene in a population of organisms |
methane | an odorless gas produced by the decomposition of organic matter |
threshold model | A model that states that a discrete trait is present only when the quantity of an underlying continuous trait is greater than some threshold. |
amp | Abbreviation of adenosine monophosphate. |
database management system | A collection of computer programs that allow storage, modification, and extraction of information from a database |
isoline | Lines on a map joining points of equal value. |
environmental impact | a positive or negative effect of any action upon a give area or resource |
vertical transmission | See vertical inheritance. |
cuttle bone | the internal calcified shell remnant of cuttlefish |
non-significant risk device | An investigational medical device that does not present significant risk to the patient or research subject, taking into account all of the risks inherent in the study |
gamodeme | a deme forming a more or less isolated local intrabreeding community |
public domain | a work is said to be in the public domain if it is not protected by copyright, or if the copyright for it has expired |
disciform | round or oval-shaped |
magma | Molten rock originating from the Earth's interior. |
dttp | Thymidine triphosphate. |
potable water | water that is safe for drinking by humans |
convectional lifting | The vertical lifting of parcels of air through convective heating of the atmosphere |
phanerozoic | Geologic eon that occurs from 2500 million years ago to today |
possession | equivalent to 'territory.' Although it still appears in Federal statutes and regulations, "possession" is no longer current colloquial usage |
grid south | The direction south as measured on the Universal Transverse Mercator grid system. |
environmental sex determination | the phenomenon in which the sex of the offspring is determined by environmental factors |
directional selection | Selection which acts on individuals showing a phenotypic distribution in such a way that those individuals towards, or at the end of, the distribution are favoured. |
radial corallite | a corallite on a side of a branch as opposed to an axial corallite on the tip of the branch |
particulate organic matter | particulate material of biological origin that is suspended in water |
hydrophobic | Having an aversion to water; tending to coalesce and form droplets in water. |
epigenetic alteration | A heritable change that does not affect the DNA sequence but results in a change in |
breaker | a wave that approaches shallow water, causing the wave height to exceed the depth of the water, in effect tripping it |
retina | The innermost layer of the vertebrate eye, containing photoreceptor cells (rods and cones) and neurons; transmits images formed by the lens to the brain via the optic nerve. |
grassroots | people or society at a local level, rather than at the center of major political activity |
origin | The arbitrary starting point on a graph or grid coordinate system |
western blot | Similar in principle to a Southern blot, but where the species adsorbed to the nitrocellulose filter is a protein, and the detection makes use of specific antibodies. |
ne | See effective population size. |
section | a thin slice of some biological material for examination under a microscope |
buoyancy | the tendency of object to float or sink when placed in a liquid |
distal | /DIS-təl/ adj |
isoelectric point | The pH of a solution in which a protein has no net charge and does not migrate in an electric field. |
regression line | a line fit to a set of data points (scatterplot) using least-squares regression; a graph of the mathematical relationship between two variables |
atrichous | in Cnidaria, lacking spines or barbs |
ablation | the experimental removal or killing of some part of an organism |
t. c. | in the volume cited (tomus citate) |
supernatant | the soluble liquid fraction of a sample after centrifugation or precipitation of insoluble solids |
ichno | a prefix meaning "trace" |
climate change | the long-term fluctuations in temperature, precipitation, wind, and all other aspects of the Earth's climate |
penicillate | brush-like; having or resembling a tuft or brush of fine hairs |
mass coral bleaching | coral bleaching extending over large distances as a result of anomalously high water temperatures |
kinetic energy | energy associated with motion |
allele | One or more alternative forms of a gene or a locus, each possessing a unique nucleotide sequence |
light | A humanly visible form of electromagnetic radiation |
nummiform | NƏM-ə-form, NƏM-yə-ler/ Circular, oval, coin-shaped. |
criterion | a standard rule or test on which a judgment or decision can be based. |
volcano plot | Volcano plot is used to look at fold change and statistical significance simultaneously |
response element | By definition, a "response element" is a portion of a gene which must be present in order for that gene to respond to some hormone or other stimulus |
massive | having a large compact structure without a definable shape |
information technology | a very general term referring to the entire field of Information Technology - anything from computer hardware to programming to network management |
frequency | Proportion of observations occurring for an event. |
tumor suppressor genes | Mutated forms of these genes are believed to be responsible for about half the cases of inherited breast cancer, especially those that occur in younger women |
wave of advance | A favorable allele advances behind a moving cline, known as a wave of advance. |
cleft lip/palate | congenital condition with cleft lip alone, or with cleft palate; cause is thought to be multifactorial. |
explosive eruption | Volcanic eruption where high-viscosity granite-rich magma causes an explosion of ash and pyroclastic material |
ahermatypic coral | a coral that lacks zooxanthellae and does not build reefs |
egg chamber | a cavity or chamber in the sand, excavated by a nesting seaturtle, into which eggs are deposited for incubation |
contiguous gene split | Paralogues where one of them has been split partway along, but where the fragments of the gene are within 1Mb of each other on the same chromosome strand. |
decompression diving | scuba diving that requires in-water stops during ascent to the surface to allow off-gassing of nitrogen |
environmentalism | advocacy for, or work toward, protecting the natural environment from destruction by human activities |
gyre | a large water-circulation system of geostrophic currents rotating clockwise in the Northern Hemisphere or counterclockwise in the Southern Hemisphere |
striations | Grooves of scratches found in surface rock that are the result of glacial abrasion. |
sleep disorders | Chronic troubles with the amount, duration or quality of sleep an individual experiences |
processed food | Any food product that has undergone physical or chemical treatment resulting in a substantial change in the original state of the food. |
hyperpolarization | An electrical state whereby the inside of the cell is made more negative relative to the outside than at the resting membrane potential |
ribosome | A structure consisting of small and large ribonucleoprotein units that is the site of intracellular protein biosynthesis. |
placebo | a mock-treatment used in single-blind or double-blind experiments to eliminate bias from experiment subjects or administrators, respectively. |
sp | abbreviation for species, singular and plural |
dysfunction | Doesn't work properly |
clod card | cards or balls made of plaster of Paris (calcium sulfate hemi-hydrate) or alabaster (calcium sulfate dihydrate) |
neighbor joining | A recursive distance-based phylogenetic reconstruction algorithm that takes as its input a distance matrix and produces an unrooted phylogenetic tree. |
allele | One of the variant forms of a gene at a particular locus, or location, on a chromosome |
boss | a columnar, flat-topped coral-algal growth or erosion structure usually found on the upper surfaces of spurs and buttresses |
acaudal | lacking a tail |
jaccard index | a statistic used for comparing the similarity and diversity of sample sets; also known as the Jaccard similarity coefficient |
logarithmic scale | a constant ratio scale in which equal distances on the scale represent equal ratios of increase |
great plate count anomaly | A phenomenon in which the number of cells from natural environments that can be grown in culture is much less than what can be seen through a microscope |
leaf trace | A small vascular bundle that extends from the vascular tissue of the stem through the petiole and into a leaf. |
hamular | hook-shaped |
xantho- | a prefix meaning yellow |
seaward slope | the area of a barrier reef or atoll from the reef crest |
dorid nudibranch | a type of nudibranch (order Nudibranchia) possessing a feather-like external gill on the back and a rhinophoral sheath |
polymorphic species | species which have a variety of morphological types |
ozone layer | Atmospheric concentration of ozone found at an altitude of 10 to 50 kilometers above the Earth's surface |
infauna | animals that inhabit the sandy or muddy surface layers of the ocean bottom, i.e., those that live buried or dig into the substrate |
protected species | species which are protected by federal legislation such as the Endangered Species Act, Mammal Protection Act, and Migratory Bird treaty Act |
uniplanar | occurring in one plane |
small circle | A circle on the globe's surface that does not bisect the center of the Earth |
nothosaur | Any member of a group of aquatic reptiles of the Triassic |
b chromosome | An extra chromosome that is not required for normal function in either sex and is present in only some individuals. |
great circle | An imaginary circle drawn on the Earth's surface that has its center synchronize to the center of the planet |
delta | Large deposit of alluvial sediment located at the mouth of a stream where it enters a body of standing water. |
schreckstoff | a chemical alarm substance (a pheromone) produced by the skin of some groups of fishes when injured |
fore reef terrace | the uppermost portion of the fore reef; a flat plain beginning at the base of the buttress or mixed zone, at a depth of about 60 m |
patent | A declaration issued by a government agency declaring someone the inventor of a new invention and having the privilege of stopping others from making, using or selling the claimed invention. |
striatum | The largest component of the basal ganglia, the striatum controls movement, balance, and walking |
geostationary satellite | satellite whose orbit around the equator equals that of the Earth's rotation, making it possible for them to view the same disc of Earth's surface below continuously |
cytoplasmic determinants | The maternal substances in the egg that influence the course of early development by regulating the expression of genes that affect the developmental fate of cells. |
parthenogenesis | Literally, “virgin birth”; the activation of an unfertilized egg cell to a dividing state |
ion | An atom, molecule or compound that carries either a positive (cation) or negative (anion) electrical charge. |
towfish | an instrument, e.g., a side scan sonar, towed behind a ship |
visible spectrum | that part of the electromagnetic spectrum to which the human eye is sensitive, between about 0.4 and 0.7 micrometers |
gridding | Gridding is used for locating the centers and bounding boxes of each spot. |
doldrums | Area of low atmospheric pressure and calm westerly winds located at the equator |
membrane filter | a thin microporous material of specific pore size used to filter bacteria, algae, and other very small particles from water |
balance view | The view that genetic variation is mostly maintained by balancing selection |
unigene | UniGene is an experimental system for automatically partitioning GenBank sequences into a non-redundant set of gene-oriented clusters |
antagonist | Molecule that bond to the receptor site of a protein |
length | The number of amino acids in, for example, a protein. |
sclerodermite | the basic unit of coral skeletal microstructure |
ephemeral | short-lived, transitory |
white blood cell | They are a very important part of the body's defense against bacterial infection |
complementary nucleotide | a member of the pairs adenine-thymine, adenine-uracil, and guanine-cytosine that have the ability to hydrogen bond to one another |
palliative treatment | Treatment, the sole aim of which is to remove or lessen the debilitating effects of, for example cancer. |
lgt | See lateral gene transfer. |
input traits | Traits introduced into crop plants with the aim of lowering the cost of production and improving the performance of the crop in the field |
arc/info | geographical information system (GIS) software developed by ESRI that is used to do more robust GIS operations |
dextrose | n |
bioinformatics | The acquisition, storage, arrangement, analysis, display and communication of information related to the biology of living things, generally assisted by the use of computers. |
columella | any small column-like structure in various plants and animals, often forming the central axis of development for the organism as a whole, or an anatomical structure; the thickened axial pillar around which the whorls of gastropods are constructed; the central axis of a corallite; the central structure of the calyx formed by fusion of the septa |
micromanipulator | Instrument used with a microscope for manipulating small instruments and specimens. |
confidentiality | In genetics, the expectation that genetic material and the information gained from testing that material will not be available without the donor's consent. |
thermosphere | Atmospheric layer above the mesosphere (above 80 kilometers) characterized by air temperatures rising rapidly with height |
mud mound | accumulations of biogenic carbonate sediment that are common in the geological record; carbonate mud-dominated deposits with topographic relief and few or no stromatolites, thrombolites or in place skeletons; carbonate mud mounds can be organic and/or inorganic in origin |
tristyly | A polymorphism with three different arrangements of anther and stigma |
biradial symmetry | a body plan in some cnidarians that has two planes of symmetry rather than the several planes of a radially symmetrical animal, or the single plane of a bilaterally symmetrical one. Both planes of symmetry are longitudinal and are at right angles to each other. Both include the aboral-oral axis, which is the axis of symmetry |
grid north | The direction north as measured on the Universal Transverse Mercator grid system. |
obesity | a medical term describing a condition where body fat has accumulated to levels which may negatively impact on the health of the individual. |
electric potential | The difference in the amount of electric charge between a region of positive charge and a region of negative charge |
environmental genomics | See metagenomics. |
side scan sonar | sonar designed to look sideways and at a downward angle from both sides of a towed unit, called a towfish. The bottom and any objects in the water above the bottom reflect sound waves back to the towed array |
coagulation disorders | a large group of disorders in which a person experiences excessive bleeding or alternatively, clotting. |
bifacial | having like opposite surfaces; describes plates which have corallites on both sides |
sedimentary rock | rock formed from sediments in ancient oceans, e.g., sandstone, limestone, and chalk |
pluralism | The belief that there are multiple opinions about an issue, each of which contains part of the truth, but none that contain the whole truth. |
hexamerous | having six parts, or parts in multiples of six arranged radially, as found in anthozoans in which the tentacles and mesenteries are in multiples of six |
pin | Type of distylic flower possessing a long style and short anthers. |
core | the innermost layer of the Earth, consisting primarily of pure metals such as iron and nickel |
swimmeret | one of several flat, fringed, and usually bilobed, paired appendages on the ventral surface of the abdominal somites of decapod crustaceans, used for swimming and reproduction |
associative learning | The acquired ability to associate one stimulus with another; also called classical conditioning. |
half-life | The time required for the disappearance of one half of a substance. |
coelobite | an organism that lives in pores and spaces within a reef |
anion | An ion with a negative charge |
virtual image | An image (as seen in a plane mirror) formed of points from which divergent rays (as of light) seem to emanate without actually doing so |
hadalpelagic zone | the deepest zone of the ocean, extending from about 6000 meters to the very bottom (10,911 meters in the Mariana trench off the coast of Japan) |
supernumerary | superfluous or extra |
nucleus | The central cell structure that houses the chromosomes and DNA. |
varve | A thin yearly deposit of sediment found on the bottom of a lake |
dntp | Abbreviation for a deoxynucleoside 5'-triphosphate when the exact deoxynucleotide (typically dATP, dTTP, dGTP, or dCTP) is unspecified or unknown. |
saharan dust | large quantities of dust, originating in the Sahara desert of Africa, are blown across the Atlantic Ocean each summer, and may be a contributing factor for the declining health of Caribbean coral reefs |
substitution load | The total loss of mean fitness caused because favorable alleles substitute gradually by selection rather than instantaneously |
host | A cell or organism used for growth of a virus, plasmid or other form of foreign DNA, or for the production of cloned substances. |
erg | unit of work measuring force of one dyne applied over one centimeter |
action potential | Nerve impulses that travel along axons. |
sex chromosome | A chromosome that is inherited differently by the two sexes |
biosphere | the thin region surrounding the Earth that is capable of supporting life |
optical oceanography | the subdiscipline of oceanography concerned with the propagation and interaction of radiation, typically at wavelengths between about 350 and 750 nm, with seawater |
stream bed | the stream bottom or surface over which a stream flows |
amorphic mutation | Antimorphic Mutation |
anthropomorphism | attributing a human characteristic to an inanimate object or a non-human species |
evolutionarily stable strategy | A strategy that cannot be displaced by any alternative |
ultracentrifuge | A high-speed centrifuge that can attain speeds up to 60,000 rpm and centrifugal fields of 500,000 times gravity |
pileated | having a cap or crest |
vertical evolution | See vertical descent. |
granite | Granite is a coarse-grained, usually light-colored, igneous rock that cools deep under the Earth's surface |
sand | coarse sediment typically found in areas exposed to currents and wave energy |
inversion | An aberration in chromosome structure resulting from reattachment in a reverse orientation of a chromosomal fragment to the chromosome from which the fragment originated. |
pfge | See Pulsed field gel electrophoresis. |
null model | See null allele. |
nearest-neighbor exchange | A method for searching phylogenetic tree space whereby a new tree is generated from a starting tree by swapping neighboring branches in the starting tree. |
interception | Is the capture of precipitation by the plant canopy and its subsequent return to the atmosphere through evaporation or sublimation |
diabetes mellitus | An endocrine disorder marked by inability to maintain glucose homeostasis |
continental margin | the water-covered edges of continents consisting of the continental shelf, the continental slope, and the continental rise |
cold glacier | Glacier in which the ice found from the its surface to base has a temperature as cold as -30° Celsius throughout the year |
easterly wave | Atmospheric disturbance in the tropical trade winds |
follicle | Ovarian structure that stores the ovum and secretes female hormones. |
theory | a comprehensive explanation of a given set of data that has been repeatedly confirmed by observation and experimentation and has gained general acceptance within the scientific community |
meteorology | the science that deals with atmospheric phenomena, especially weather and weather conditions |
metamorphosis | A change of form, especially the conversion of a larval form to an adult form. |
multiple testing | If many significance tests are carried out, then some will reject the null hypothesis just by chance |
divergence | Horizontal outflow of wind from an area |
laminar flow | Movement of water within a stream that occurs as uninterrupted parallel flows |
linear relationship | a situation in which the best-fitting regression line is a straight line |
cohort | A cohort is a group of people who participate in a research study in which participants' health is monitored over time. |
molecule | A group of atoms arranged to interact in a particular way; one molecule of any substance is the smallest physical unit of that particular substance |
aspergillosis | a widespread fungal infection of Caribbean soft corals |
direct selection | See selection, direct. |
covariance | A measure of association between two variables (x, y) |
active continental margin | a continental margin that is characterized by tectonic activity, which results from the collision of two tectonic plates, for example, the subduction of an oceanic plate under a continental plate. |
phospholipid | See the section of the course on Cell Membranes and specifically phospholipids. |
lodicule | One of a pair of tiny scales in a grass floret, between the lemma and the fertile parts of the flower. |
network | a wide variety of systems of interconnected components; two or more computers connected together so that they can share resources |
habituation | in animal behavior, the temporary waning or disappearance of an innate response when it is elicited many times in succession |
negative phototropism | the tendency to move away from a light source |
att site | See attachment site. |
pressure melting point | Temperature at which minerals deep within the Earth and ice below the surface of a glacier are caused to melt because of the introduction of pressure. |
zulu time | one of several names for the 24-hour time period |
sporadic parkinson's disease | The most common form of Parkinson's disease, accounting for upwards of 95 percent of cases, and arising from causes likely to include a combination of genetic and environmental factors |
endopodite | in crustaceans, the inner branch, or ramus, of a biramous appendage; the main shaft of that appendage; also called "endopod" |
threshold potential | The potential an excitable cell membrane must reach for an action potential to be initiated. |
disseminated | Widely spread |
sea | a subdivision of an ocean |
supportive care | Care given to improve the |
wave height | Vertical distance between a wave's trough and crest. |
griseous | blue-grey color |
recharge area | The area on the Earth's surface that receives water for storage into a particular aquifer. |
carpel | A leaf-like structure that encloses the ovules and is the defining character of angiosperms |
nanozooid | a small zooid in tubuliporid bryozoans which bears a single tentacle and a reduced alimentary sac |
dinghy | a small open boat |
curvilinear relationship | a situation that is best represented by something other than a straight line |
ribosome | the small cellular structure where RNA translates the genetic code into proteins. |
genecology | the study of the genetic basis of ecological differentiation; the study of the genetic composition of populations in relation to their habitats |
charismatic megafauna | large animals (usually vertebrates) that evoke sentimental support from the general public, for example, porpoises,seals and sea lions, marine turtles, and manatees |
uniformitarianism | Charles Lyell's idea that geologic processes have not changed throughout Earth's history. |
thamnasteroid form | a coral growth form in which the septa of adjacent corallites are confluent, often sinuous and twisted |
reinforcement | The strengthening of prezygotic isolation through selection against cross-matings that produce unfit hybrid offspring. |
brainstem | The hindbrain and midbrain of the vertebrate central nervous system |
turbidity current | a current of of rapidly moving, sediment-laden water moving down a slope through air, water, or another fluid |
annual composite hotspot map | a map that composites all of the average monthly HotSpot (see HotSpot) images for a given year |
iptg | An abbreviation for isopropyl-ß-D-thiogalactoside |
animal communication | animals use several ways to communicate with one another |
designated use | classification specified in water quality standards for each waterbody or segment describing the level of protection from perturbation afforded by the regulatory programs |
s | SAMHSA |
ground water | underground water that is generally found in the pore space of rocks or sediments and that can be collected with wells, tunnels, or drainage galleries, or that flows naturally to the earth's surface via seeps or springs |
osmoregulation | How organisms regulate solute concentrations and balance the gain and loss of water. |
morphogen | A substance, such as Bicoid protein, that provides positional information in the form of a concentration gradient along an embryonic axis. |
bulwark | the side of a ship above the deck |
blood brain barrier | An assembly of partially permeable membranes separating the brain from the rest of the body. |
long-term memory | The ability to hold, associate, and recall information over one's life. |
natant | swimming or floating |
bootstrapping | a statistical technique based on repeated random sampling with replacement from an original sample to provide a collection of new pseudoreplicate samples, from which sampling variance can be estimated |
wave crest | the top of a wave |
convergence | Horizontal inflow of wind into an area |
emea | European Medicines Evaluation Agency - European agency for the evaluation of medicinal products; Official website |
infrasubspecific | in taxonomy, a category below the subspecies level |
reciprocal altruism | Altruistic behavior between unrelated individuals, whereby the current altruistic individual benefits in the future when the current beneficiary reciprocates. |
gene ontology | A set of controlled vocabularies used to describe biological features within a specified domain of biological knowledge |
port | the left side of a vessel to someone facing the bow or front |
poisson distribution | a probability distribution of random occurrences in which one occurrence has no influence on any other occurrence |
remote sensing | The gathering of information from an object or surface without direct contact. |
sensation | An impulse sent to the brain from activated receptors and sensory neurons. |
continental slope | the area of the sea floor that stretches from the edge of the continental shelf (~200 m) to the abyssal plain (~4000-6000 m) |
index contour | Contour line that is accentuated in thickness and is often labeled with the appropriate measure of elevation |
evapotranspiration | Combined loss of water to the atmosphere via the processes of evaporation and transpiration. |
statistical power | The chance that the null hypothesis will be rejected when the data are generated by a different model. |
metamorphosis | change of body shape, e.g., the change from a larval form to a juvenile or adult form |
albugineous | white colored |
neural tube | Primitive, hollow, dorsal nervous system of the early vertebrate embryo; formed by fusion of neural folds around the neural groove. |
brainstem | Collection of structures in the adult brain, including the midbrain, the pons, and the medulla oblongata; functions in homeostasis, coordination of movement, and conduction of information to higher brain centers. |
broad-sense heritability | See heritability. |
point source pollution | origin of a pollutant discharge from a discrete conveyance, such as an effluent from the end of a pipe |
masked/blinded study design | Study designs comparing two or more interventions in which either the investigators, the subjects, or some combination thereof do not know the treatment group assignments of individual subjects |
globular | globe-shaped; having the form of a sphere, or nearly so |
chlorofluorocarbons | gases that can be dissociated by solar radiation, which release chlorine, which in turn destroys ozone |
reef complex | the entire reef structure, including reef surface lagoon deposits and off-reef deposits |
novel variant | A distinct gene alteration that has been newly discovered; not the same as a 'new' or 'de novo' variant |
firn | Névé on a glacier that survives the year's ablation season |
deciduous | periodically shed |
nodular | having small knobs, protuberances or nodule-like projections |
animal models | Normal animals modified mechanically, genetically or chemically, used to demonstrate all or part of the characteristics of a disease |
gypsum | Sedimentary rock created by the chemical precipitation of calcium, sulfur, and oxygen. |
portunid crab | any member of the crab family Portunidae (order Decapoda, class Malacostraca) |
nautical mile | the length of a minute of arc, 1/21,600 of an average great circle of the Earth |
bar-built estuary | an estuary formed when a barrier island or sand bar separates a section of the coast where fresh water enters |
initial public offering | the initial sale of shares of a private company on public markets, turning it into a publicly-traded company. |
molecule | a group of atoms arranged to interact in a particular way; one molecule of any substance is the smallest physical unit of that particular substance. |
sand | Mineral particle with a size between 0.06 and 2.0 millimeters in diameter |
buffer | a solution or liquid whose chemical makeup neutralizes acids or bases without a great change in pH |
fathometer | an instrument for measuring underwater depth using sound |
classical conditioning | A type of associative learning; the association of a normally irrelevant stimulus with a fixed behavioral response. |
thanatocoenosis | an assemblage of organisms or their parts brought together after their deaths, as for example, by flowing water; 'death assemblage' |
mixed layer | near-surface waters subject to mixing by the action of wind and waves |
electrochemical gradient | The diffusion gradient of an ion, representing a type of potential energy that accounts for both the concentration difference of the ion across a membrane and its tendency to move relative to the membrane potential. |
trisomy | Having three copies of a particular chromosome in each somatic (body) cell instead of the normal two copies |
nomenclature | the description of new taxa or alterations to the concept of previously described taxa which involve changes in the names of taxa |
recumbent fold | A fold in which the axial plane is almost horizontal. |
tympaniform | drum-shaped |
azygospore | A zygospore that develops parthenogenetically (development of sexual reproduction from the female gamete alone). |
density-dependent factor | Any factor influencing population regulation that has a greater impact as population density increases. |
histone deacetylase | HDAC is a transcription-regulating enzyme that is responsible for enhancing the growth and division of tumor cells. |
pheromone | A hormone-like substance that acts as an attractant. |
coastal flooding | flooding that occurs from storms where water is driven onto land from an adjacent body of water |
open design | An experimental design in which both the investigator(s) and the subjects know the treatment group(s) to which subjects are assigned |
phosphorimaging | The detection of radioactivity using "phosphor" compounds that emit visible light when exposed to radiation |
declination | Location (latitude) on the Earth where the Sun on a particular day is directly overhead (90° from horizon) at solar noon |
cosanguine | Related by a common ancestor. |
digital versatile disc | an advanced type of CD-ROM that holds a minimum of 4.7 gigabytes (unit of storage) to a maximum of 17 gigabytes of information |
millipore filter | a thin membrane composed of cellulose fibers that is used, for example, as a filter in the bacteriological examination of water |
double helix | Describes the coiling of the antiparallel strands of the DNA molecule, resembling a spiral staircase in which the paired bases form the steps and the sugar-phosphate backbones form the rails. |
phreatic water | water below the level at which all voids in the rock are completely filled with water |
heterokont | One of the kingdoms of eukaryotes |
braided stream | Shallow stream channel that is subdivided into a number of continually shifting smaller channels that are separated by bar deposits. |
microvillus | any of the minute hairlike structures projecting from the surface of certain types of cells |
deimatic behavior | defensive postures or other visual displays, including color changes, that function to intimidate or frighten another animal |
fire wall | a combination of hardware and software that separates a network into two or more parts for security purposes |
neutrality | The state of being free from the effects of selection. |
reef top | the area comprising the reef flat and reef crest |
antimorphic mutation | Hypermorphic Mutation |
latent heat flux | Latent heat flux is the global movement of latent heat energy through circulations of air and water |
trophosome | a collective term for all nonreproductive structures of colonial hydrozoans; a structure in beard worms (Polychaeta-Siboglinidae)that harbors commensalistic chemosynthetic bacteria in cells called bacteriocytes |
chromosome | A structure composed of DNA, found in the cell nucleus, on which genes are arranged in a linear order. |
primary growth | Growth initiated by the apical meristems of a plant root or shoot. |
windward | Upwind side or side directly influenced to the direction that the wind blows from |
priority | in taxonomy, the seniority of a taxonomic name fixed by the date of publication; the earliest published name has priority |
repeatability | Measure of the degree of association between repeated measurements for the same trait obtained on the same individual |
ice pellets | A type of precipitation |
concordance | Phenotypic similarity |
global taxonomy initiative | initiative established by the Conference of the Parties to the Convention on Biological Diversity (CBD) to address the lack of taxonomic information and expertise around the world |
calm | the condition of the water surface when there are no winds, waves or swell |
dead zone | hypoxic (low-oxygen) areas in the world's oceans and in some large lakes where all or most life forms are unable to survive |
distinct population segment | "population," or "distinct population segment," are terms with specific meaning when used for listing, delisting, and reclassification purposes to describe a discrete vertebrate stock that may be added or deleted from the list of endangered and threatened |
conventional therapy | Standard treatment |
genome imprinting | Children with Angleman syndrome typically also have small heads, experience seizures, have pronounced speech impairment, are hyperactive, and have balance disorders. |
axial skeleton | in a vertebrate skeleton, the skull, vertebral column, ribs, and sternum |
cross-fertilization | Fusion of gametes formed by different individuals; as opposed to self-fertilization. |
sex chromosome | One of the pair of chromosomes responsible for determining the sex of an individual. |
levee | a raised embankment along the edge of a river channel |
cortex | Ground tissue that is between the vascular tissue and dermal tissue in a root or dicot stem. |
jetty | a structure extending into the ocean to influence the current or tide in order to protect harbors, shores, and banks |
freezing rain | A type of precipitation |
scleractinian | Any member of the cnidarian group Scleractinia, or "hard-rayed" corals |
gamma radiation | A type of ionizing, electromagnetic radiation that readily penetrates the body tissues of organisms |
zoanthella | an elongate larval form of Zoanthidea with a ventral band of very long cilia |
allele | One of a series (of at least 2) forms of a gene, differing in genetic sequence and resulting in observable differences in heritable character (phenotype). |
regulator | a regulator is a piece of scuba equipment that reduces the high pressure of air in a scuba air tank to a pressure level that is usable by the diver |
paleoproterozoic | Division of time from 2500 to 1600 Mya. |
hla complex | Another name for the MHC in humans; refers to the "Human Leukocyte Antigen" complex located on chromosome 6. |
dermal | /DERM-əl/ adj |
verrucose | having a warty appearance |
cytoplasm | The cellular substance outside the nucleus |
confidence interval | Estimated range of values (calculated from a given set of sample data) that is likely to include an unknown population parameter. |
exclusivity | a temporary FDA-granted monopoly, distinct from patent or other intellectual property protection |
emergent | Describes a property of a system that is not predictable from the starting conditions. |
metabolic gas | a gas which is released by the body as a result of metabolism |
apical meristem | Embryonic plant tissue in the tips of roots and in the buds of shoots that supplies cells for the plant to grow in length. |
retrovirus | A type of virus |
lacriform | tear-drop shaped; also called "dacriform" |
acontium | a thread-like part of a coral polyp's or anemone's digestive system and employed as defensive or aggressive structures when extruded |
wind vane | A mechanical device used to measure the direction of wind flow |
retrorse | bent or turned backward or downward |
hookah | "hookah" refers to diving where the diver is supplied with breathable air from the surface via an air compressor and an airline (hose) |
landsat satellite | U.S |
hidden-markov model | A statistical model consisting of states that represent an aspect of a sequence and transitions between states, and are used to label bases in a sequence with the modelled property |
radial symmetry | Characterizing a body shaped like a pie or barrel, with many equal parts radiating outward like the spokes of a wheel; present in cnidarians and echinoderms; also can refer to flower structure. |
diffusion | Spreading due to the cumulative effect of small random movements. |
vapor pressure | Pressure exerted by water vapor molecules in a given quantity of atmosphere. |
incident command system | a management system used to organize emergency response |
t | Tachycardia |
macula | a dark spot, blemish; the small, highly sensitive area (of the human eye) which is located in the center of the retina |
fine sediment | a sediment composed of fine-grained materials, such as clay or mud particles |
support group | Group of individuals who meet on a regular basis to exchange mutual support, often focusing on a shared area of difficulty |
transient | Short-term; brief |
supercooled water | Cooling of water below 0° Celsius without freezing |
biophotonics | Biological applications of photonics, a technology that utilizes light and other forms of radiant energy in which a quantum unit is the photon. |
polar vortex | High pressure system located in the upper atmosphere at the polar regions |
hydrophobic core | A portion of a protein that avoids dissolution in water and is composed of a set of hydrophobic amino acids. |
scientific law | a statement of a scientific fact or phenomenon that is invariable under given conditions |
euchromatin | The more open, unraveled form of eukaryotic chromatin that is available transcription |
diffusion equation | An equation that describes how a probability distribution spreads out with time; it applies when random fluctuations are small. |
erythema | Redness of the skin. |
reciprocal discovery | Some jurisdictions enable a prosecutor by motion to request that the defense provide specific discovery material to the prosecution. |
tree of life | Darwin’s metaphor for the history of life, which portrays all living things (the tips of the branches) as modified descendants of a single common ancestor (the root or trunk). |
uncinate | hooked at the tip |
random sample | Sample of individuals drawn without regard to any specific criteria e.g., phenotype, genotype or relationship to other individuals. |
sense | 1 |
micropyle | The part of the ovule where the pollen tube accesses the embryo sac. |
probability | Frequency of an event in an number of repetitions of an experiment. |
bycatch reduction devise | equipment attached to commercial fishing equipment to reduce the amount of bycatch taken |
power | This is classically defined as the probability of rejecting a null hypothesis that is false. |
placental mammal | Any member of the mammalian group Eutheria |
water mass | a large body of water whose density characteristics are distinct from the surrounding aquatic environment because of inherent temperature or salinity differences |
genetic stock | A reproductively isolated unit* that is genetically different from other stocks |
abyssalpelagic zone | the pelagic environment from a depth of 4000 m to 7000 m.The water temperature in this zone is constantly near freezing; also called the "abyssopelagic zone" |
senior synonym | in taxonomy, the older name of two synonyms |
recurrence | The return of cancer after a period of being diagnosed cancer free (in remission). |
pcr | a method of creating copies of specific fragments of DNA |
boyle's law | if the temperature is kept constant, the volume of a given mass of gas is inversely proportional to the absolute pressure |
bed load | Portion of the stream load that is carried along the stream bed without being permanently suspend in the flowing water. |
antigen | Foreign substance stimulating antibody production; binding partner of antibody |
dimorphism | Displaying two separate growth forms. |
coloumb | unit of electrical charge of one ampere over period of one second |
carboxyl terminus | A term that identifies one end of a protein molecule |
hydrothermal plume | a cloud of hot, mineral-rich water that flows out of a hydrothermal vent and disperses into the ocean, usually several hundred meters above the seafloor vent site |
metadata | Information about data that facilitates access and use of the data. |
hurricane | An intense cyclonic storm consisting of an organized mass of thunderstorms that develops over the warm oceans of the tropics |
biological amplification | Increase in concentration of toxic fat-soluble chemicals in organisms at successively higher trophic levels of a grazing food chain or food web because of the consumption of organisms at lower trophic levels. |
mesolamella | a collagenous layer that separates the choanochambers of hexactinellid sponges (glass sponges) |
plateau basalt | An accumulation of horizontal flows of basaltic lava |
advanced | new, unlike the evolutionary ancestral or primitive condition |
leachate | a liquid which has percolated through a soil and which carries substances in solution or suspension |
porphyrous | purple color |
palustrine | pertaining to swamps or marshy habitats |
zygocardiac ossicles | triangular plates, usually bearing denticles, which project into the cavity of the cardiac stomach in decapod crustaceans, such as shrimps,crabs and lobsters; part of the gastric mill |
reflected infrared radiation | Form of electromagnetic radiation with a wavelength between 0.7 to 3.0 micrometers (µm). |
nociceptor | a sensory receptor which responds to potentially harmful stimuli; produces a sensation of pain |
tectal | pertaining to the roof of a structure, e.g |
u | a common replacement for the Greek letter µ as a symbol for the micron or micrometer |
radial symmetry | a basic morphological plan of organisms that have their body parts arranged around a central axis |
ascocarp | The fruiting body of a sac fungus (ascomycete) . |
polyphyletic | Pertaining to a grouping of species derived from two or more different ancestral forms. |
obligatory | obligate or required |
oceanic reef | a reef that develops adjacent to deeper waters, often in association with oceanic islands |
major histocompatibility complex | A group of genes that control several aspects of the immune response |
null hypothesis | the statistical hypothesis that states that there are no differences between observed and expected data |
meandroid form | a coral growth form in which the corallites are arranged in multiple series within the same walls |
evaporation fog | A type of fog produced from the advection of cold air over warm water or warm or moist land |
reticulate | resembling or forming a network |
game theory | An approach to evaluating alternative strategies in situations where the outcome depends not only on each individual's strategy but also on the strategies of other individuals; a way of thinking about behavioral evolution in situations where the fitness of a particular behavioral phenotype is influenced by other behavioral phenotypes in the population. |
absorbance unit | the unit of absorbance, as used in UV spectroscopy. |
suspension feeder | An aquatic animal, such as a clam or a baleen whale, that sifts small food particles from the water. |
ectoprocta | an animal phylum synonymous with the phylum Bryozoa, the "moss animals" |
marble | Metamorphic rock created by the recrystallization of calcite and/or dolomite. |
gust front | A boundary found ahead of a thunderstorm that separates cold storm downdrafts from warm humid surface air |
molecular recognition | The binding of two molecules though noncovalent bonds in which the shape of the molecules plays a key role in the strength of binding. |
de facto | in fact; in reality; existing but not officially recognized or legally established |
geocoding | The conversion of features found on an analog map into a computer-digital form |
bar | unit of pressure of one million dynes per square centimeter |
fall | Season between summer and winter |
motor unit | A single motor neuron and all the muscle fibers it controls. |
mudstone | Fine grained sedimentary rock composed of lithified silt and clay particles. |
motor neuron | A nerve cell that transmits signals from the brain or spinal cord to muscles or glands. |
preprint | an article printed especially for private distribution in advance of the actual publication |
brackish | Environment that is influenced by seawater with a salinity less than 35 parts per thousand (usually caused by the presence of an inflow of fresh water). |
threshold value | A relative fluorescent unit (RFU) value that must be exceeded to make an allele call |
snrnp | Abbreviation for Small Ribonuclear Particle. |
selection index | Procedure used to find appropriate weights for records (one or more traits) of an individual and its relatives and to combine information into a single value to rank individuals for selection. |
coancestry | A measure of the relatedness of two individuals |
buffer | A substance that consists of acid and base forms in a solution and that minimizes changes in pH when extraneous acids or bases are added to the solution. |
nucleus | The structure within the cell that contains the chromosomes |
dehydration synthesis | /də-HIGH-dray-shən, dee-/ The linking of monomers into a polymer by removing a molecule of water from each. |
exothecal dissepiment | a horizontal partition outside of the corallite wall |
e | Echocardiogram |
vascular bundle | A strand of vascular tissues (both xylem and phloem) in a stem or leaf. |
polariscope | an instrument for detecting polarized light |
stoss | Side of a slope that faces the direction of flow of ice, wind, or water |
evaporation | The removal of heat energy from the surface of a liquid that is losing some of its molecules |
knowledge mining | The extraction of useful knowledge from data patterns that have been rendered meaningful by the integration of information derived from external sources. |
second law of thermodynamics | This law states that heat can never pass spontaneously from a colder to a hotter body |
buddy | a scuba diving partner |
protostome | Member of one of two large groups of bilaterian animals including ecdysozoans and lophotrochozoans (see deuterostome) |
orange book | also known as the Approved Drug Products with Therapeutic Equivalence Evaluations, the Orange Book contains detailed information on all approved drugs and must list all extant patents. |
rigidity | Abnormal stiffness in a limb or other body part |
decaliter | /DEK-ə-LEET-er/ n |
biosphere | The entire portion of Earth inhabited by life; the sum of all the planet's ecosystems. |
effective population size | Effective number of individuals passing on gametes to the next generations |
telomere | The protective structure at each end of a eukaryotic chromosome |
barometer | Instrument that measures atmospheric pressure. |
aging | A decrease in survival or reproduction with age |
carbonate | a mineral composed mainly of calcium (Ca) and carbonate (CO3) ions |
heading | the direction in which a vessel is pointed at any given moment |
reef check | a volunteer, community-based monitoring protocol designed to measure the health of coral reefs on a global scale |
bioassay | an assay for the activity or potency of a substance that involves testing its activity on living materials |
cuticular pore | a minute pore opening at the surface of the cuticle |
geographical range | The geographic area in which a population lives. |
dendrobatidae | /den-droh-BAT-ə-die, -dee/ n |
facultative | able to exist under more than one set of environmental conditions |
intubate | The placement of a tube into the airway to help a person breathe |
type ii error | the error of not rejecting the null hypothesis when it is false |
calypto | a prefix meaning "covered" |
catheter | A tube placed in the body to remove or introduce fluids into the body; a tube that moves liquids in or out of the blood; a plastic tube placed in a vein or under the skin to withdraw or introduce fluids in the body |
lumen | unit of luminous flux |
genome | They may occur in immediate succession, or with other sequences interspersed between them, and may also occur in inverted ("turned around end for end") form |
coccolith | Any member of a group of primarily single-celled, photosynthetic organisms that originated in the Jurassic |
arenaceous | a condition of skeletal architecture in sponges in which sand and/or foreign spicule debris partly or completely replaces native spicules within the sponge skeleton; resembling or containing sand; or growing in sandy areas |
random segregation | During meiosis, the two chromosomes of a pair are distributed randomly to the gametes, each gamete having an equal chance of receiving either chromosome. |
centrum | a center or central mass |
g | Gaps (affine gaps) |
palindrome | An arrangement of symbols that reads the same backward as forward. |
asco | a prefix meaning "sack" |
microsclere | a small spicule in sponges |
axis | the internal, usually calcium carbonate skeletal rod of sea fans (Gorgonacea) and sea pens (Pennatulacea) |
ester | a chemical compound formed by the reaction of an organic or inorganic acid with an alcohol, with the elimination of water |
spiniform | spine-shaped |
estuary | a partially-enclosed coastal body of brackish water with one or more rivers or streams flowing into it and with a free connection to the open ocean |
eluviation | Movement of humus, chemical substances, and mineral particles from the upper layers of a soil to lower layers by the downward movement of water through the soil profile |
correlation | Standardized measure of the degree of association between two characteristics. |
neoadjuvant therapy | Treatment given as a first step to shrink a tumor before the main treatment, which is usually surgery, is given |
innovation | A change to a preexisting feature. |
zoarium | the form of a bryozoan colony |
appeasement behavior | any conciliatory behavioral display |
ebb tide | that period of tide between a high water and the succeeding low water; falling tide |
subspecies | a taxonomic group that is a division of a species |
dendriform | having a structure that resembles a tree or shrub |
centrioles | structures in the cytoplasm from which the spindle apparatus forms. |
dust dome | Dome of air that surrounds a city created from the urban heat island effect that traps pollutants like particulate matter. |
emesis | Vomiting |
lanciform | lance-shaped |
aquarius | Aquarius is an underwater ocean laboratory located in the NOAA Florida Keys National Marine Sanctuary |
subsequent | Another, next |
coordinate system | In Ensembl, the term "coordinate system" or "coord_system" identifies which level of the assembly we are working on |
hurricane | an intense tropical cyclone in which winds tend to spiral inward toward a core of low pressure, with maximum surface wind velocities that equal or exceed 33.5 m/sec (75 mph or 65 knots) for several minutes or longer at some point |
independent variable | In an experiment, when one factor is manipulated, a second factor responds |
reptile | Group of terrestrial vertebrate animals that includes turtles, tortoises, snakes, lizards, crocodiles, and alligators. |
replication | The process of synthesizing a copy of a DNA molecule from nucleotides using information contained within one strand of a template DNA molecule |
graben fault | This fault is produced when tensional stresses result in the subsidence of a block of rock |
uv reactivation | A phenomenon in which survival of an ultraviolet-irradiated phage is greater upon infecting a host that has also been irradiated with UV than upon infecting a host that has not been irradiated with UV |
irb | Institutional Review Board (see above) |
ribosome | A cellular particle which is involved in the translation of mRNAs to make proteins |
rastrate | rake-like |
oogamous | characterized by reproducing by the fusion of small motile male gametes and large nonmotile female gametes |
da | Dalton unit. |
demography | The study of statistics relating to births and deaths in populations. |
icosahedral symmetry | The symmetry displayed by a regular polyhedron that is composed of 20 equilateral triangular faces with 12 corners. |
off-reef | a synonym of reef slope |
water table | the level or depth below the ground that is saturated with water |
accretion | growth by virtue of an increase in intercellular material |
thermal circulation | Atmospheric circulation caused by the heating and cooling of air. |
adp | Abbreviation of adenosine diphosphate. |
tautra reef | one of the world's shallowest deep-water coral reefs, located in Norwegian waters at only 39 meters water depth |
m | Magnetic Resonance Imaging (MRI) |
apopinacoderm | in sponges, a surface lined with apopinacocytes |
prime meridian | an imaginary line running from north to south through Greenwich, England, used as the reference point for longitude |
russet | reddish brown color |
acoelomate | A solid-bodied animal lacking a cavity between the gut and outer body wall. |
thrombosis | A blood clot in a blood vessel |
isopleth | a general term for a line connecting points of equal value of some quantity |
equity investment | an investment buying partial ownership of a company. |
dorsoventral | an axis extending from the dorsal to ventral surface of an animal body |
continuum | a continuous set of data for which each data point is related to the adjacent point; a gradual or imperceptible intergradation between two or more extreme values |
direct sun | refers to a measurement based only on direct radiation from the sun's disk and excluding indirect radiation from the remainder of the sky |
mitochondria | These structures or organelles in the cell are the main energy source: they are often called the powerhouse of the cell |
taxon | a group or category of biological classification at any level (plural: taxa). |
truncation selection | Selection that eliminates those with the largest (or smallest) trait values. |
autosome | A chromosome that is not directly involved in determining sex, as opposed to a sex chromosome. |
personalized medicine | Use of information on an individual’s genotype to improve its health. |
allele | Alternative form of a genetic locus; a single allele for each locus is inherited from each parent (e.g., at a locus for eye color the allele might result in blue or brown eyes). |
population genetics | The study of the distribution of genes in populations and of how the frequencies of genes and genotypes are maintained or changed over time. |
nucleus | The structure within eukaryotic cells that contains chromosomal DNA. |
nutrient cycle | The cycling of a single element by various abiotic and biotic processes through the various stores found in the biosphere, lithosphere, hydrosphere, and atmosphere. |
type i error | the error of rejecting the null hypothesis when it is true |
polar front | Weather front located typically in the mid-latitudes that separates arctic and polar air masses from tropical air masses |
bel | unit of noise intensity equal to ten decibels |
eutrophication | Death of organisms in a lake or pond due to an overabundance of algae that consume all of the dissolved oxygen in the water |
holdfast | a root-like structure for attachment that anchors attached seaweeds, other algae, and octocorals to the substratum |
phenotype | Phenotype is how a person looks (on the outside and inside the body) due to his or her genes and the environment (for example, having a certain eye color, being a specific blood type, or being a certain height) |
interface | the common boundary between two substances such as a water and a solid, water and a gas, or two liquids, such as water and oil |
pungent | sharp, biting or acrid sensation, especially in taste or smell |
reciprocal cross | If a cross is made between A males and B females, then the reciprocal cross is between B males and A females. |
bias | a tendency or preference towards a particular perspective or result; in statistics, an inadequacy in experimental design that leads to results or conclusions not representative of the population under study; the consistent or systematic underestimation or overestimation of a true value, because of preconceived notion of the person sampling the population |
binomial | Consisting of or pertaining to two terms. |
deliquesce | /del-lə-KWESS/ v |
lumbar puncture | Also called a spinal tap - involves the removal of the fluid in the spine for examination. Can cause headache afterwards. |
geologic time scale | a relative time scale based upon fossil content |
genetic banking | The deposit of an individual's genetic information to a database that enables the individual to control access. |
cavate | cave-like |
superinfection | The secondary infection by a phage in a cell already harbouring the same phage. |
data processing | Data processing is defined as the systematic performance of operations upon data such as handling, merging, sorting, and computing |
api | A series of routines that applications can use to make the operating system request and carry out lower-level services. |
minamata disease | mercury poisoning of humans from eating contaminated seafood |
polymer | a molecular chain, ring or web formed of units of smaller molecules, often repeating in an ordered pattern. |
pectiniform | comb-shaped |
orthology | The relationship of any two homologous characters whose common ancestor lies in the most recent common ancestor of the taxa being considered |
post | After |
nutrient cycle | the cyclic conversion of nutrients from one form to another within biological communities |
neuromuscular junction | The junction between an axon terminal of a motor neuron and a muscle fiber innervated by that motor neuron; the axon terminal of a motor neuron is typically branched, forming neuromuscular junctions with a number of different muscle fibers. |
controlled experiment | An experiment in which an experimental group is compared to a control group that varies only in the factor being tested. |
scute | an external horny, chitinous or bony plate or scale, such as those on the shell of a turtle |
catastrophism | General theory that suggests that certain phenomena on the Earth are the result of catastrophic events |
oncogene | A gene that is a mutated (changed) form of a gene involved in normal cell growth. |
epoch | a division of geologic time next shorter than a period |
determinate cleavage | A type of embryonic development in protostomes that rigidly casts the developmental fate of each embryonic cell very early. |
lesion | any pathological or traumatic discontinuity of tissue, or loss of function of a part |
biomass | an estimate of the amount of living matter per some unit volume or area |
parturition | the process of giving birth |
cell proliferation | The increase in cell number due to growth and division. |
decadal | refers to a climatic process that re-occurs every decade or once every few decades |
pavement | rock exposed at the Earth's surface in the form of a more or less horizontal surface, usually with crevices or joints |
relative quantification | A type of real-time PCR data analysis used to calculate differences in a target concentration across different samples |
dorsal fin | in fishes, one or more fins situated on the midline of the back, having spines or rays, sometimes both; excludes the adipose fin found in some fishes, such as catfishes and salmon |
trough | An elongated area of low pressure in the atmosphere. |
aromatic | a type of hydrocarbon, such as benzene or toluene, with a specific type of ring structure |
sunset | Moment of time when the Sun's edge completely disappears below the Earth's horizon. |
ribosome | Cellular structure composed of RNA and protein that is responsible for protein synthesis. |
dna ladder | A set of synthetic DNA fragments that differ in length. |
bergschrund | A deep crevasse commonly found at the head of an alpine glacier |
syngameon | a group of discrete morphological units (semispecies) that are interfertile; a cluster which comprises several morphospecies, i.e., "all of species or semispecies linked by frequent or occasional hybridization in nature |
law of segregation | Genetic factors appear in pairs within an individual |
inductive reasoning | A type of logic in which generalizations are based on a large number of specific observations. |
arenicolous | living in sand |
circadian | being, having, characterized by, or occurring in approximately 24 hour periods or cycles |
luminous | emitting light. |
translation | The production of a protein from mRNA |
paradox | a statement that seems self-contradictory, yet may nevertheless be true |
senescence | See aging. |
misspelling | in zoological nomenclature, a citation of a name in the literature that is incorrectly spelled |
mucus | a gelatinous material secreted by specialized mucous cells |
biology | The scientific study of life. |
gfp | See Green Flourescent Protein. |
principle of allocation | The concept that each organism has an energy budget, or a limited amount of total energy available for all of its maintenance and reproductive needs. |
acid | A substance that increases the hydrogen ion concentration of a solution. |
dioxin | a chlorinated organic chemical byproduct (dibenzo-p-dioxins), released into the environment from incineration and during industrial processes that use chlorine |
bay-mouth bar | A narrow deposit of sand and/or gravel found across the mouth of a bay. |
heat shock | 1 |
complementary therapy | Techniques or approaches often used in addition to standard treatment |
heterostyly | Specific flower morphology in which stamens and styles are of unequal lengths, thereby promoting cross-pollination. |
random sample | a sample in which each individual in a population has the same chance of being selected as any other |
vocalization | a sound intentionally produced by an animal |
gulf stream | the warm ocean current of the North Atlantic |
calibrate | to check or adjust the graduations of a quantitative measuring instrument |
resect | Remove or cut out surgically |
cro | Contract research organization |
ph | A trial which could lead to registration of the investigated drug |
microsatellite marker | See SSLP. |
imaging | Any method used to produce a picture of internal body structures. |
ovoviviparity | the reproductive mode where the eggs hatch and develop in the female's reproductive tract (or a specialized pouch in the males of some species), are not nourished in any way by the female, and are free-swimming when released from the parent |
cell | The smallest component of life capable of independent reproduction and from which DNA is isolated for forensic analysis. |
insular | relating to, or characteristic of, or situated on an island |
pleiotropy | the phenomenon of variable phenotypes for a number of distinct and seemingly unrelated phenotypic effects. |
chromosome | A threadlike, gene-carrying structure found in the nucleus |
benign variant | (synonym: polymorphism) An alteration in a gene distinct from the normal, wild-type allele that does not appear to have a deleterious effect |
margin | a boundary, edge, or border of a structure |
manubrium | the proboscis of a jellyfish: a tubular structure that connects the mouth to the digestive cavity |
species at risk | an extirpated, endangered or threatened species or a species of special concern (formerly called "vulnerable") |
dyad symmetry | Property of a structure that can be rotated by 180° to produce the same structure. |
thrum | Type of distylic flower possessing a short style and long anthers. |
universe | All of the observable phenomena in the celestial cosmos. |
bilateral surgery | Surgery performed on both sides of the brain. |
spring tide | Tide that occurs every 14 to 15 days and coincides with the new and full moon |
infra- | a prefix meaning "below" |
solution | a liquid mixture in which the minor component, the solute, is uniformly distributed within the major component, the solvent |
plesiotype | of the same sex as the holotype |
counter current | a secondary current flowing in a direction opposite to that of the main current |
allele | An alternate version of a gene, e.g., Gregor Mendel's pea plants have flowers with two colors: white and reddish-purple |
syntax | The rules that determine how words combine to make phrases and sentences. |
cure | in the case of lymphoma, the term used when there is no sign of disease present in the body and adequate time has passed so that the chances of recurrence are small. |
low grade | Low grade is associated with indolent, or slow growing cancers. NHL types that are low grade (indolent) are small lymphocytic, small cleaved cell follicular, mixed follicular, small cleaved cell diffuse, intermediately differentiated diffuse and cutaneous T-cell (mycosis fungoides). |
hyper- | above, exceeding, higher, more than, abnormally increased |
blizzard | Winter severe weather condition characterized by strong wind, blowing snow, and cold temperatures. |
knot | The unit of speed used in navigation that is equal to 1 nautical mile (6,076.115 ft or 1,852 m) per hour |
reticulate | net-like |
everted | turned inside out |
ground truthing | measurements conducted on the ground or at sea to calibrate, compare or verify observations made from satellites or aircraft |
chronology | the age-depth relationship in ice, sediment, or another deposit |
antimorphic mutation | Gain-of-function Mutation |
scleractinia | an order of Cnidaria, usually producing calcareous skeletons with hexameral symmetry |
heterogeneous | consisting of dissimilar elements, parts or forms; having non-uniform structure or composition |
hamulus | a small hook-like projection |
isotonic contraction | a muscular contraction in which tension is constant while the length of the muscle changes |
euphotic zone | the layer of the ocean that receives sufficient sunlight for photosynthesis |
pneumatophore | a modified aerial root rising above ground that may function as a respiratory organ in plant species such as mangroves, which are subjected to inundation or soil saturation |
macroscopic | A term that describes characteristics large enough to be perceived without magnification; in forensic hair examination, this typically applies to unmounted hairs. |
mass | Refers to the amount of material found in an object (usually of unit volume). |
affinity chromatography | A column chromatographic technique that employs attached functional groups that have a specific affinity for sites on particular proteins. |
equilibrium | A state of balance in which there is no net change. |
proxy | in climate research, a proxy variable is something from which a variable of interest can be obtained |
corallimorpharia | an order of the subclass Zoantharia (Hexacorallia) of the phylum Cnidaria |
era | Geologic time unit that is shorter than an eon but longer than a period. |
placental mosaicism | see: confined placental mosaicism. |
induced pluripotent cell | a type of pluripotent cell made directly from a somatic (from the body) cell |
ocean | the salt water surrounding the great land masses, and divided by the land masses into several distinct portions, each of which is called an ocean; the entire body of salt water that covers more than 70 percent of the earth's surface |
secondary production | the production of living material per unit area (or volume) per unit time by herbivores |
research_interest | In the Colleague information section, Research_interest refers to the broad areas of study the colleague is pursuing |
cladogram | A phylogenetic tree in which the only information given is about the relationships among taxa (i.e., the length of the branches is not meaningful). |
decimorgan | /DES-ə-MORE-gən/ See: Morgan unit. |
gas chromatography | a method of separating chemical components of a mixture, which involves the passage of a gaseous sample through a column having a fixed adsorbent phase |
hereditary disorders | A pathological condition due to changes in individual genes, or groups of genes or in sections of chromosomes or whole chromosomes |
violaceous | violet color |
baldwin effect | a hypothesis in which a characteristic, such as individual learning, significantly affects the evolution of the species with respect to that characteristic |
northeast trade winds | See trade winds. |
cerebrum | The dorsal portion of the vertebrate forebrain, composed of right and left hemispheres; the integrating center for memory, learning, emotions, and other highly complex functions of the central nervous system. |
perigee | the point in the orbit of the Moon or man-made satellite nearest to the Earth; the point in the orbit of a satellite nearest to its companion body |
stator | a stationary part of a machine that remains fixed while other parts rotate around it. |
prior odds | A ratio of the probability of one hypothesis relative to the probability of another hypothesis ((Prob(H1)/Prob(H2)), prior to observing any data. |
orographic precipitation | Is precipitation that forms when air is forced to rise because of the physical presence of elevated land |
trochophore | Larval type characteristic of many protostomes including annelids and many mollusks. |
relative frequency | the number of items of a certain type divided by the number of all the numbers being considered |
regeneration | Restoration of tissue by repair or regrowth. |
trabeculum | in corallites, one of many rods or axial structures composed of fibrous tufts (sclerodermites), which form teeth along the upper septal margin |
high grade | A grade of Non-Hodgkin lymphoma denoting fast growth. |
hypermorphic mutation | Hypomorphic Mutation |
gene cloning | The production of multiple copies of a gene. |
annotation | Analysis and commentary added to sequence data in databases |
risk assessment modification | Alteration of the assessment of an individual's genetic risk based upon previously unknown information about the family history or upon the results of genetic testing; depending on the nature of the new information, risk may be either increased or decreased |
brunneous | dark brown color |
value-added traits | Modified crops produced with traits such as improved taste, nutritional value, or utility to provide value for the consumer. |
phenylketonuria | A hereditary disorder that results in reduced production of the liver enzyme phenylalanine hydroxylase |
binomen | a two-part name given to a species in which the first part is the name of the genus and the second is the specific name |
a priori | Deduced from first principles; without prior knowledge. |
rnai | RNA-interference |
hydrogen sulfide | a toxic gas formed by the anaerobic decomposition of organic matter |
punctule | a minute dot, pit or aperture |
albicant | whitish color |
photoreceptor | a nerve ending, cell, or group of cells specialized to sense or receive light |
scatter diagram | a two-dimensional histogram showing the joint probability density of two variables within a data sample; it is used to interpret data by graphically displaying the relationship between two variables |
sympatry | Coexistence in the same place. |
exotic stream | A stream that has a course that begins in a humid climate and end in an arid climate |
greenhouse effect | the heating that occurs when gases such as carbon dioxide trap heat escaping from the Earth and radiate it back to the surface |
antagonist | A substance that tends to nullify the action of another. |
investigational new drug | an application to pursue clinical trials with an experimental drug that has passed pre-clinical trials. |
fulvous | dull yellow color |
potential energy | Is the energy that a body possesses by virtue of its position and that is potentially transformable into another form of energy. |
null allele | inactive form of a gene. |
source | The origin of the variation data (e.g |
counterselection | A condition that prevents growth of the donor in a genetic cross. |
hormone | A chemical substance made in one cell and secreted so as to influence the metabolic activity of a select group of cells located at other sites in the organism. |
growth curve | See growth phases. |
isomer | One of several organic compounds with the same molecular formula but different structures and therefore different properties |
barometer | an instrument for measuring air pressure |
westerlies | Dominant winds of the mid-latitudes |
branchial aperture | the exterior opening of a gill chamber |
buttress | see spur and groove |
microarrays | Ordered sets of DNA fragments fixed to solid surfaces |
polyphyletic | Pertaining to a taxon whose members were derived from two or more ancestral forms not common to all members. |
umbilical cord-derived stem cells | Undifferentiated cells taken from umbilical cord blood |
gram atom | the quantity of an element whose weight in grams is numerically equal to the atomic weight of the element; represents the mass in grams of Avogadro's number of atoms of the element |
carbon sink | a reservoir that can absorb or "sequester" carbon dioxide from the atmosphere |
allee's principle | there is a positive relationship between individual fitness and either the numbers or density of conspecifics |
articulated | jointed, as in for example, the soft fin rays of fishes |
craggy | a surface which is rocky and steep |
phylogeography | Inference of population history from the genealogy that connects genes sampled from different geographic locations |
geo-referenced data | refers to data with geographic location information included, such as latitude and longitude |
ekman layer | the thin horizontal layer of water riding on top of the ocean that is affected by wind |
silt | Mineral particle with a size between 0.004 and 0.06 millimeters in diameter |
debriefing | Giving subjects previously undisclosed information about the research project following completion of their participation in research |
polynesia | scattered islands of the central and southern Pacific Ocean roughly between New Zealand in the southwest, Hawaii in the north, and Easter Island in the southeast |
dissect | /də-SECT or DIE-sect/ v |
chromatophore | a cell whose cytoplasm contains pigment granules that can be rapidly concentrated or dispersed, producing an overall effect of altering the color, color pattern or tone of the whole or part of an animal |
edge | as in networks |
petiole | The stalk of a leaf, which joins the leaf to a node of the stem. |
macro lens | in photography, a lens with the ability to focus from infinity to extremely close, allowing it to capture images of very small objects in frame-filling, larger-than-life sizes |
pareiasaur | Any member of a group of herbivorous anapsid reptiles from the Permian. |
histogram | A graphic representation of a frequency distribution. |
decubital | /də-KYOOB-ə-təl/ adj |
boundary current | a large-scale water stream in the upper ocean which separates water masses |
oak foundation | a group of charitable and philanthropic organizations established in various countries |
fermi | unit of length equal to one quadrillionth of a meter |
esthete | a light sensitive organ in a minute vertical canal in the upper layer of the shell plate of a chiton |
population size | Number of individuals in a population (census population size). |
batholith | A large mass of subsurface intrusive igneous rock that has its origins from mantle magma. |
toponym | a place name |
frost point | Is the temperature at which water vapor saturates from an air mass into solid usually forming snow or frost |
v | Varices |
international zoological congresses | the legislative bodies responsible for the rules of the International Code of Zoological Nomenclature and for authorization of the activities of the International Commission on Zoological Nomenclature |
spiny lobster | a crustacean of the Family Palinuridae; it lacks large claws and has a flexible, leathery tail fan |
dredging | a method for deepening streams, swamps or coastal waters by scraping and removing solids from the bottom |
discrimination | differential response to different stimuli |
biolimiting | relating to the environmental factors determining or restricting the growth of a particular life form |
vertebra | one of the bony segments of the vertebral column of vertebrate animals; in brittlestars (Echinodermata-Ophiuroidea), a vertebra is one of the many articulated ossicles that join together along the length of the arms |
flagella | Long, flexible, helical protein structures that extend from the surface of the cell |
curvilinear regression | the relation between variables when the regression equation is nonlinear |
style | Part of the pistil arising from the ovary , and through which the pollen tube passes. |
lobe-finned fish | Common name for members of the class Sarcopterygii |
case-control study | A form of association study in which “case” individuals with, for example, a disease are compared with “control” individuals without it. |
specific gravity | The ratio of the mass of a body to the mass of an identical volume of water at a specific temperature. |
glycolysis | The catabolic conversion of glucose to pyruvate with the production of ATP. |
boundaries | The perimeter or border surrounding potential physical evidence related to the crime. |
remuneration | Payment for participation in research |
gene therapy | A treatment in which functional genes are introduced into the patient. |
neural tube | A tube of cells running along the dorsal axis of the body, just dorsal to the notochord |
consistency index | A measure of how well the character states for a specific character trait map on a phylogenetic tree |
informed consent | Permission given by an individual to proceed with a specific test or procedure, with an understanding of the risks, benefits, limitations, and potential implications of the procedure itself and its results |
alpha foetoprotein | see AFP. |
omim | Online Mendelian Inheritance in Man |
tachyauxesis | rapid growth; a part or structure that grows at a quicker rate than the organism as a whole |
nuchal organ | a sense organ on upper side of head in many branchiopods; photoreceptor-like sensory cells in the nuchal region (posterodorsal region of the head) of some cephalopods; paired chemosensory structures in some annelids |
morphometry | The measurement of shape |
solar day | Time required for the Earth to complete one rotation relative to the Sun. |
dissection | /die-SEX-shən, də-/ n |
genetic distancing | a measure of the genetic similarity between any pair of populations |
conditional lethal mutant | A mutant that can grow under one set (permissive) of environmental conditions but dies under different (restrictive or nonpermissive) conditions. |
colorimeter | an instrument for measuring and determining color |
biome | Largest recognizable assemblage of animals and plants on the Earth |
rain shadow | an area of reduced precipitation on the wind-sheltered lee side of a mountain range caused by warming of air and dissipation of cloudiness as air descends the mountain barrier |
lymphomatoid granulomatosis | A B-cell lymphoma that is now called pulmonary angiocentric B-cell lymphoma. |
gas laws | laws that predict how gases will behave with changes in temperature, pressure, and volume |
empathy | Understanding another person's feelings by remembering or imagining being in a similar situation. |
cariniform | keel-shaped |
placental mammal | A member of a group of mammals, including humans, whose young complete their embryonic development in the uterus, joined to the mother by a placenta |
balanced polymorphism | A stable polymorphism maintained by balancing selection. |
cancellous | possessing a spongy or porous surface |
perianal | near or surrounding the anus |
heliotropism | an orienting response to the sun |
uniformitarianism | The assumption that the same natural processes acted in the past as are observed to operate now. |
reef block | a large, isolated rock section that has been displaced from the reef platform, reef margin, reef front zones or the non-calcium carbonate bedrock, usually resulting from storm waves |
endosymbiont | an organism which lives within the body of another organism as part of a symbiotic relationship |
circinate | ring-shaped |
medical device | A diagnostic or therapeutic article that does not achieve any of its principal intended purpose through chemical action within or on the body |
conchiform | shell-shaped |
amplification plot | The graphical representation of changes in relative fluorescence units (RFU) per real-time PCR cycle. |
benign | Not malignant or threatening, usually without serious consequence |
muscovite | Rock forming mineral of the mica group. |
compressed | a body shape which is flattened laterally, bringing the right and left sides closer together, e.g., a butterfly fish or a flounder |
needle biopsy | A sample of tissue is taken with a needle and looked at under a microscope. |
evolutionary game | An interaction between individuals in which the payoff depends on the strategy played by each of them. |
double-stranded rna | Speaking very generally, it's the form you get when you take two cords and twist them together, so that each one spirals around the other. |
aquiferous system | water circulatory system in sponges composed of choanoderm, pores and chambers |
glutamate | an amino acid neurotransmitter that acts to excite neurons |
squall | a brief sudden and violent wind storm, often accompanied by rain or snow |
dispersion | The pattern of spacing among individuals within geographic population boundaries. |
branchial plume | a respiratory structure or external gills, usually located on the dorsal side toward the posterior of dorid nudibranchs |
interstitial | refers to the interstices or pore spaces in rock, soil, or other material subject to filling by water; fluid-filled spaces between cells in tissues |
biocycle | a subdivision of the biosphere, e.g., a biochore |
algal galls | a response of gorgonia (Pseudoplexaura spp.) to tissue invasion by the algae, Entocladia endozoica, in Florida and Caribbean waters |
circum | a prefix meaning "around" |
forage | to search for food |
federal waters | generally waters from 3 - 200 miles offshore |
cold front | A transition zone in the atmosphere where an advancing cold air mass displaces a warm air mass. |
biparental | the situation where the young are raised by both parents |
carbon cycle | Worldwide circulation and reutilization of carbon atoms, chiefly due to metabolic processes of living organisms |
peptide bond | the bond between two amino acids formed when a carboxyl (-COOH) group of one amino acid joins an amino (-NH2) group of another amino acid, releasing water in the process |
basal body | A structure similar to a centriole that initiates the growth of axonemal microtubules and anchors cilia and flagella to the surface of the cell. |
igneous rock | a rock formed by the cooling and crystallization of molten magma |
illecium | a "fishing rod-like" appendage on the head of some fishes, usually a modified dorsal fin spine |
nucleotide diversity | The chance that two randomly chosen copies of a nucleotide site will carry different bases |
actinobiology | the study of effects of radiation upon living organisms |
degrees of freedom | Number of independent parameters required to describe some component |
dilution | the decrease in relative ownership among existing investors as additional shares are issued. |
nerve ring | the center of the nervous system of some higher invertebrates that encircles the esophagus.It is composed largely of nerve fibers and associated ganglia; also called the "supraesophageal commissure" |
national benthic inventory | a quantitative database on benthic species distributions and a corresponding taxonomic voucher collection of preserved benthic specimens obtained from studies conducted by the National Oceanic and Atmospheric Administration (NOAA) and partnering institutions in estuarine and other coastal areas of the United States |
cuneiform | wedge-shaped |
oblong | elongated (stretched) from a square or circular shape |
perforation | Puncture, tear or hole |
microtidal | coastal ocean or waterway with a low mean tidal range, e.g., less than 2 meters |
alee effect | the social dysfunction and failure to mate successfully when population density falls below a certain threshold |
mudflow | Form of mass movement where fine textured sediments and soil mix with water to create a liquid flow. |
law of the minimum | This biological law suggests that organisms are normally limited by only one single physical factor that is in shortest supply relative to demand. |
palate | roof of the mouth cavity |
gbrowse | Developed by the Generic Model Organism Database (GMOD) project, GBrowse is an interactive genome browser that can be customized to show selected chromosomal features as well as display user provided annotations. |
heterogeneity | The variable appearance of a condition; the heterogeneity of Parkinson's disease refers to the fact that its symptoms and appearance vary widely from patient to patient |
spermatophore | a packet containing sperm cells which is produced by the male genital system for transfer to the female |
patent | A grant made by a government that allows the creator of an invention the sole right to make, use, and sell that invention for a set period of time. |
biological rhythm | an overt, measurable activity generated by some internal oscillator (or ‘clock') |
tsc | A non-profit foundation to provide public SNP-related information available to the public without intellectual property restrictions. |
mixed zone | the populous region of most bank/barrier reefs seaward of the lower palmata zone |
wedge shaped | a form that is thick at one edge and tapered to a thin edge at the other |
allele | Is one member of a pair or series of different forms of a gene. |
blue gene | A massively parallel supercomputer with 1 million processors that is under construction and will be capable of 1 petaflop floating point operations/sec |
aplastic | Incomplete growth or development of a structure. |
length | The number of base pairs in, for example, a transcript. |
spectrophotometer | an instrument for measuring speed of different parts of light spectrum |
fungi | A large group of non-flowering plants that include mould and yeasts as well as mushrooms and toadstools. |
ph | Scale used to measure the alkalinity or acidity of a substance through the determination of the concentration of hydrogen ions in solution |
marl | fine-grained carbonate-rich mud; a calcareous clay which contains approximately 30 to 65 percent calcium carbonate |
isochromosome | A chromosome in which the arms (‘p' and ‘q') are of equal length and the information in each of the two arms is genetically identical. |
competitive inhibitor | A substance that reduces the activity of an enzyme by entering the active site in place of the substrate whose structure it mimics. |
cladogram | A dichotomous phylogenetic tree that branches repeatedly, suggesting a classification of organisms based on the time sequence in which evolutionary branches arise. |
f-pilus | A filamentous appendage encoded by the F-plasmid |
high score | In the results of a BLAST search, the scores of the highest-scoring HSP found with each database sequence is listed in the "high score" column. |
convergence | The endpoint of an iterative or recursive algorithm |
institutional review board | A specially constituted review body established or designated by an entity to protect the welfare of human subjects recruited to participate in biomedical or behavioral research |
similar | Of the same substance or structure throughout; homogeneous; having a marked resemblance or likeness; of a like nature or kind. |
appendage | any body part that extends from the main axis or trunk or cephalized portion of an organism |
allele | Alternative form of a genetic locus; a single allele for each locus is inherited from each parent (e.g., at a locus for eye color the allele might result in blue or brown eyes) |
desmopressin acetate | a drug used to treat mild hemophilia A and von Willebrand disease that doubles or triples factor VIII levels in the blood |
dd | Dideoxy-. |
hypersaline | referring to water with a salinity higher than that of natural seawater |
empirical | based on experience or observations, as opposed to theory or conjecture |
character | An observable heritable feature. |
supercoiling | Higher-order twisting of DNA strands. |
potential evapotranspiration | Is a measure of the ability of the atmosphere to remove water from the surface through the processes of evaporation and transpiration assuming no limitation on water supply. |
atomic weight | The total atomic mass, which is the mass in grams of one mole of the atom. |
actinoporins | a group of proteins, derived from extracts of the tentacles of sea anemones, which are characterized by their ability to spontaneously interact with biological membranes |
carrier | An individual who possesses an unexpressed, recessive trait. |
intraspecific competition | competition between individuals of the same species |
overwash | a deposit of marine-derived sediments landward of a barrier system, often formed during large storms; transport of sediment landward of the active beach by coastal flooding during a tsunami, hurricane, or other event with extreme wave action |
junior synonym | in taxonomy, the younger name of two synonyms |
periodic table | a chart of the known chemical elements, arranged according to their atomic numbers |
climatology | Scientific study of the Earth's climate over long time spans (greater than several days) |
ascii | American Standard Code for Information Interchange |
partim | in part |
archaic human | A hominin that does not have the modern anatomy of Homo sapiens |
homogeneity chi-square | Chi-square test used to individually test several data sets for fit to an expected ratio or to determine whether different sets of data are homogeneous (give the same results) so that the data sets may be pooled. |
distal | Toward the end, away from the center of the body |
neotype | in taxonomy, a specimen selected as type specimen subsequent to the original description in cases where the original holotype, or lectotype, or all paratypes, or all syntypes are lost or destroyed, or suppressed by the Commission (Zoology) |
microtubule | Cytoplasmic structure consisting of the protein tubulin and involved in cellular structure and movement. |
emergent vegetation | plants growing in water but emerging from it, usually at the water's edge |
sagittiform | arrow-shaped |
petaloid septa | primary septa which have a tapered or curved shape because they are enclosed by other septa |
mutation | Change in the structure of a gene or chromosome. |
continental drift | Theory that suggests that the Earth's crust is composed of several continental plates that have the ability to move |
hominin | All taxa closer to humans than to chimpanzee |
fluting | grooves in the shaft of a column |
target joint | a joint where bleeds tend to occur |
pyriform | pear-shaped |
unequal crossover | The outcome when two tandemly repeated sequences do not pair correctly |
pileiform | umbrella-shaped |
nonpolar | Lacking in polarity; characterized by an even distribution of positive and negative charges. |
t-test | a statistical procedure for testing the difference between two or more means |
ph | A measure of hydrogen ion concentration equal to -log [H+] and ranging in value from 0 to 14. |
biological species | A population or group of populations whose members have the potential to interbreed. |
angler | a person catching fish or shell fish with no intent to sell; includes people releasing the catch |
windlass | a winch used to raise a ship's anchor |
absorption spectrum | The range of a pigment's ability to absorb various wavelengths of light. |
homologous structures | Structures in different species that are similar because of common ancestry. |
replica plating | A technique for transferring an identical pattern of bacterial colonies from one petrie plate (the master plate) to a series of other plates containing different media |
anabolic steroids | Synthetic chemical variants of the male sex hormone testosterone; they produce increased muscle mass but also suppress testosterone production, leading to shrinkage of the testes, growth of the breasts, and premature baldness; long-term use increases the risk of kidney and liver damage and of liver cancer. |
horse latitudes | two belts or regions of subtropical high-pressure areas, located between 30-35 degrees north and south, in which the wind is light and varied and weather is hot and dry |
serial spawning | spawning more than once in a season |
citreous | lemon color |
fluorescent pigment | a pigment that absorbs light at one wavelength and emits it at a different wavelength |
fragile | easily broken |
electrogenic | capable of generating electric currents and a painful electric shock, as in electric rays |
wave length | the distance between two successive wave crests or troughs |
cost of natural selection | See substitution load. |
investigational device exemptions | Exemptions from certain regulations found in the Medical Device Amendments that allow shipment of unapproved devices for use in clinical investigations |
book lungs | Organs of gas exchange in spiders, consisting of stacked plates contained in an internal chamber. |
basidium | A reproductive appendage that produces sexual spores on the gills of mushrooms (club fungi). |
wetland | an area that, at least periodically, has waterlogged soils or is covered with a relatively shallow layer of water |
phylum | A group or category used in the taxonomic and/or phylogenic classification of organisms |
gonophore | a sexual zooid produced as a medusa bud upon a hydroid, sometimes becoming a free hydromedusa and sometimes remaining attached |
chi-square test | Statistical procedure used to test degree of association or agreement between observed results and those results expected based on the hypothesis being tested. |
subcutaneous | Under the skin. |
cross-licensing | agreement in which two or more firms with competing and similar technologies strike a deal to reduce the need for legal actions to clarify who is to profit from applications of the technology. |
sustainable development | An approach to development that meets the needs of the present without compromising the ability of future generations to meet their own needs |
hertz | unit of frequency equal to one cycle per second |
solution | A homogeneous, liquid mixture of two or more substances.solvent The dissolving agent of a solution |
toxicity | Harm; problem; poisoning; unwanted side effect |
directional selection | Selection favoring one allele over another or favoring increased values of a quantitative trait |
cooperativity | A phenomenon by which the binding of a ligand to one site of a receptor or enzyme alters the affinities of the other sites. |
phyllopod | any of various branchiopod crustaceans having swimming and respiratory appendages that resemble leaves |
family history | The genetic relationships and medical history of a family; when represented in diagram form using standardized symbols and terminology, usually referred to as a pedigree |
catamaran | a type of boat consisting of two hulls joined by a frame |
convergence | The end-point of any algorithm that uses iteration or recursion to guide a series of data processing steps |
geostrophic current | a flow that sustains a balance between Coriolis deflection and a pressure gradient |
unzip | a method for uncompressing files on a PC after downloading them from the Internet |
cm | see centimorgan. |
nephelometer | an instrument for measuring the turbidity of a fluid by measuring the scattering function of particles suspended in the fluid |
slice | The term "slice" in Ensembl refers to a length of DNA sequence |
north star | Polaris, the North Star, is visible in the northern hemisphere and indicates the direction of north |
trait | A feature that is genetically controlled. |
north pole | Surface location defined by the intersection of the polar axis with Earth's surface in the Northern Hemisphere |
amorphic mutation | Gain-of-function Mutation |
hidden markov model | A joint statistical model for an ordered sequence of variables. The result of stochastically perturbing the variables in a Markov chain (the original variables are thus "hidden"), where the Markov chain has discrete variables which select the "state" of the HMM at each step |
crystal structure | Term used to describe the high resolution molecular structure derived by x- ray crytallographic analysis of protein or other biomolecular crystals. |
canine tooth | a pointed, conical tooth that is located at the front or edge of the jaw |
mosaic teeth | the series of rows of flat teeth found in rays,skates and some sharks |
backwash | The return water flow of swash |
holter monitor | Portable machine for recording heartbeats |
triturate | to grind or masticate |
nape | the area behind the head of a fish, extending from the back of the skull to the origin of the dorsal fin |
fissure | a deep and narrow depression cutting across the reef front with origins relating to jointing planes in the reef limestone or non-limestone bedrock |
juvenile | a young animal that has not reached sexual maturity |
thalamus | A mass of gray matter (nerve cells) located deep in the brain that is responsible for motor control and serves as a relay center for sensory signals. |
experiment | A controlled investigation designed to evaluate the outcomes of causal manipulations on some system of interest. |
glass sponge | a hexactinellid sponge, found at deeper depths, with a skeleton made of four and/or six pointed silaceous spicules |
breeding value | Value of an individual in a breeding program |
morphospecies | A species defined by its anatomical features. |
nucleus | The structure in a cell which contains the chromosomes. |
ontology | As used by researchers interested in the representation of biological knowledge by computer programs and databases, "ontology" refers to a controlled vocabulary, or set of such vocabularies, used to describe biological features within a specified domain of biological knowledge. |
spermatangium | the male gamete-producing reproductive organ in certain algae |
mass extinction | a catastrophic, widespread perturbation where major groups of species become extinct in a relatively short time |
analysis of variance | The separation of the variance into a sum of components, a widely used statistical technique that is the basis for quantitative genetics. |
tornado | A vortex of rapidly moving air associated with some severe thunderstorms |
query | A request for information submitted to a computerized database |
prenatal | Before birth |
gale | a storm with wind speeds between 34 to 40 knots |
genetic code | This term has many meanings both legitimate and illegitimate |
necrolysis | the decomposition of an organism's body after it dies |
magnetic field | The space influence by magnetic force |
compact of free association | the status of free association recognizes an island government as a sovereign, self-governing state with the capacity to conduct foreign affairs consistent with the terms of the Compact |
nanomole | One billionth mole; 10-9 mole. |
jordan's rule | In general, closely related species do not have identical ranges, but often their ranges are not very far apart |
arciform | bow-shaped |
medline uid | The "Medline" tag that appears within the listed information for a paper contains the Medline unique identifying number (UID) for the paper; the first 2 numbers usually (but not always) indicate the year of publication. |
isostatic rebound | The upward movement of the Earth's crust following isostatic depression. |
water pik method | a laboratory technique which uses a water pik to separate tissues from the skeletons of hard corals or remove zooxanthellae from coral polyp tissues |
rural area | an area in which most residents depend on agriculture or the harvesting of natural resources for their livelihood |
bioaccumulation | the buildup of chemical substances in the cells or tissues of an organism |
swell | the persistence of a wind-formed wave after the wind ceases |
saturation diving | the situation where a diver is at a depth or pressure for a long enough period of time (12 hours or longer) to have the partial pressures of the dissolved gases in the body at equilibrium with the partial pressure of the gases in the surrounding environment |
paliform crown | a circle of paliform lobes that surround the columella |
bridge loan | a short-term, high-interest loan provided by venture capitalists to companies in dire need of cash. |
frictional force | Force acting on wind near the Earth's surface due to frictional roughness |
perennial plant | Plant species that lives for more than two years. |
clinical status | Current state of health |
dioecious | having separate sexes |
surface tension | A measure of how difficult it is to stretch or break the surface of a liquid |
numerical prediction model | a computer program designed to represent, in mathematical terms, processes that occur in nature |
foliaceous | leaf-like; also foliose |
heiau | a traditional Hawaiian place of worship; a religious shrine |
wastewater treatment plant | a facility containing a series of tanks, screens, filters and other processes by which pollutants are removed from water |
coevolution | The mutual evolutionary influence between two different species interacting with each other and reciprocally influencing each other's adaptations. |
albedo | the ratio of the amount of light reflected by an object and the amount light falling on it (incident light); a measure of the reflectivity or intrinsic brightness of an object (a white, perfectly reflecting surface would have an albedo of 1.0; a black perfectly absorbing surface would have an albedo of 0.0) |
partial profile | DNA evidence that does not yield identifiable results in all loci under analysis. |
detrivore | /DET-trə-vore/ n |
bond strength | The strength with which a chemical bond holds two atoms together; conventionally measured in terms of the amount of energy, in kilocalories per mole, required to break the bond. |
chemical bond | An attraction between two atoms resulting from a sharing of outer-shell elctrons or the presence of opposite charges on the atoms; the bonded atoms gain complete outer electron shells. |
nitrogen | gas in the atmosphere that is a component of proteins. |
nitrous oxide | Gas found in the atmosphere that contributes to the greenhouse effect |
tkis | (Tyrosine |
living tag | a type of tagging method for marine turtles in which a small piece of tissue is taken from the white plastron of a hatchling and implanted in one of the dark scutes of the carapace |
parameters | User-derived values used to set the boundaries of an algorithm. |
dacriform | tear-drop shaped |
trna | Transfer RNA, cool 3D structure |
radiation | The emission of energy from an object in the form of electromagnetic waves and photons. |
tusk | an enlarged tooth |
bit | the smallest unit of information that a computer can store and process |
radionuclide | any radioactive isotope |
sedimentary rock | Rocks formed by the deposition, alteration and/or compression, and lithification of weathered rock debris, chemical precipitates, or organic sediments |
antigen | Substance capable of inducing the production of antibodies. |
artesian well | a well tapping a confined aquifer. Water in the well rises above the top of the aquifer under artesian pressure, but does not necessarily reach the land surface; a flowing artesian well is a well in which the water level is above the land surface |
polyandrous | Describes females that mate with many males. |
w | Waive |
thermal low | Area of low pressure in the atmosphere caused by the area having cooler temperatures relative to the air around it. |
anoxic | the absence of free oxygen |
icosahedron | A regular geometric polyhedron with 20 equilateral trangular faces and 12 corners |
rutherford | unit of radioactive decay equal to 1 million disintegrations per second |
proof of principle | demonstration of the commercial potential of a discovery or invention. |
assay | In general, the qualitative or quantitative analysis of a substance |
shakedown dive | a practice scuba dive to make sure that the equipment works and the divers understand procedures |
snorkel | a breathing device that allows a swimmer to breathe while face down in the water |
kinesis | A change in activity or turning rate in response to a stimulus. |
electron | A sub-particle of an atom that contains a negative atomic charge. |
cis | Arrangement of two noncarbon atoms, each bound to one of the carbons in a carboncarbon double bond, where the two noncarbon atoms are on the same side relative to the double bond. |
biochore | a group of similar biotopes |
thromboctyopenia | A low number of platelets/thrombocytes in the blood |
foliose coral | a coral whose skeletal form approximates that of a broad, flattened plate |
sensory bias | An innate preference for particular male traits, which did not evolve as a result of the sexual selection caused by that preference. |
diffusion | The movement of a substance from an area of high concentration to an area of lesser concentration as a result of random movement. |
run aground | to take a boat into water that is too shallow for it to float in, i.e., the bottom of the boat is resting on the ground |
enzyme unit | a unit to measure enzymatic activity in cells |
p-value for blast | In a BLAST search, a P-value refers to the probability of obtaining, by chance, a pairwise sequence comparison of the observed similarity given the length of the query sequence and size of the database searched |
reproductive guild | a group of unrelated fishes with a similar form of reproduction |
sexual dimorphism | pertains to systematic differences between males and females |
intelligent design | The argument that organisms are irreducibly complex and so must have been created by an intelligent designer |
desiccation | /deh-sick-KAY-shən/ n |
weak interaction | a force between atoms that is less strong than the force involved in a covalent bond |
basilar | forming a foundation |
neutropenia | Decrease in a type of white blood cells |
bilateral symmetry | a bilaterally symmetric organism is one that is symmetric about a plane running from its frontal end to its caudal end (head to tail), and has nearly identical right and left halves |
hts | High throughput screening |
scutiform | shield-shaped |
chromosome | A specific arrangement of genes |
tropical disturbance | An organized group of thunderstorms often found over a tropical ocean that generates a slight cyclonic flow of less than 37 kilometers per hour |
meniscus | The curved top surface of a column of liquid. |
spermatogenesis | The continuous and prolific production of mature sperm cells in the testis. |
evolutionary significant unit | a group of organisms that has undergone significant genetic divergence from other groups of the same species |
molar solution | an aqueous solution that contains one mole (gram-molecular weight) of solute per liter |
epigenesis | A cartilaginous flap that blocks the top of the windpipe, the glottis, during swallowing, which prevents the entry of food or fluid into the respiratory system. |
bacterial bleaching | loss of zooxanthellae with resultant bleaching caused by a specific bacterial infection, as opposed to environmental stress |
ramifying | branching, dividing |
orbit | a bony or cartilaginous eye socket |
aphrioid form | a coral growth form in which the septa are reduced at their outer ends so neighbouring corallites are united by a zone of dissepiments (horizontal partitions within or outside of a corallite) |
mercator projection | Map projection system that presents true compass direction |
therapy | Treatment |
aggregate | a group of species, other than a subgenus, within a genus, or a group of subspecies within a species |
industrial smog | Form of air pollution that develops in urban areas |
monogamy | a male and a female mating only with each other |
imposex | the imposition of male characteristics on female organisms, as caused by some pollutants |
benthic region | the bottom layer of a body of water |
epitheca | a layer of calcium carbonate that grows outside corallite walls |
differentiation | The acquisition of specialized structural and functional features by unspecialized cells. |
method | a description of how data and information are collected |
hyaline | translucent or transparent |
intertropical convergence zone | the zone of low pressure near the equator where the trade winds converge and create heavy convectional precipitation; also known as "intertropical front (ITF) |
chemocline | a sharp gradient in chemical concentration |
endocrine | A gland that synthesizes and secretes hormones directly into the circulatory system. |
photophilous | thriving in conditions of strong light |
continental margin | The area between a continent's shoreline and the beginning of the ocean floor |
meteorology | The scientific study of the atmosphere and its associated phenomena. |
clathrate | resembling an open latticework; a chemical substance consisting of a lattice of one type of molecule trapping and containing a second type of molecule |
strategy | A general term used in game theory |
brine | water that contains a high concentration of salt |
sand dune | A hill or ridge of aeolian sand deposits with a minimum height of less than one meter and a maximum height of about 50 meters |
axis epithelium | the layer of ectodermally-derived cells which consists of corticocytes, which produce the axis, and desmocytes, which attach tissues to the axis |
rugosity | an important coral reef parameter that describes the amount of "wrinkling" or roughness of the reef profile |
flow cytometer | An instrument that measures the fluoresence intensity of individual cells. |
biocriteria | as defined by the U.S |
surge channel | a deep channel in the windward side of a coral reef through which water moves in and out of the reef |
children | In MGI, this term refers to terms in a hierarchical controlled vocabulary like ones containing Gene Ontology (GO) terms |
endosperm | A tissue, found in flowering plants, which is generated by the fusion of the central cell of the megagametophyte and a sperm |
veefer | see "REEFER" |
anaglyph | a stereoscopic picture consisting of two images of the same object, taken from slightly different angles, in two complementary colors |
differential interference-contrast microscopy | A type of microscopy in which variations in density or thickness between parts of the cell are converted to differences in contrast in the final image. |
outer slope | a synonym of reef slope |
reef base | the area below the consolidated slope extending up to 1 km but no deeper than 50 m |
endorphin | Any of several hormones produced in the brain and anterior pituitary that inhibits pain perception. |
solution | A liquid that is a homogeneous mixture of two or more substances. |
arch- | a prefix meaning 'ultimate beginning' |
effluent | a discharge of pollutants into the environment, partially or completely treated or in its natural state |
gaussian distribution | a bell-shaped distribution of results from a normal sample population; a normal distribution with a mean of 0 and a variance of 1 |
climograph | A plot of the temperature and precipitation in a particular region |
positive feedback | Change in the state of a system that enhances the measured effect of the initial alteration. |
dermal flap | a small skin flap |
anisogamy | Differentiation of gametes into two (or more) sizes. |
acentric | not centered |
prehensile | capable of or adapted for grasping, such as the prehensile tail of a seahorse |
ultrametric tree | A phylogenetic tree in which the lengths of the branches reflect measurements of geologic time. |
occam’s razor | The general principal that if all else is equal, the simplest explanation is best |
illuviation | Deposition of humus, chemical substances, and fine mineral particles in the lower layers of a soil from upper layers because of the downward movement of water through the soil profile |
coefficient | a number expressing the amount of some change or effect under certain conditions |
control | A standard of comparison by which experimental results are evaluated |
matter | Anything that takes up space and has mass. |
point bar | Stream bar deposit that is normally located on the inside of a channel bend. |
moniliform | contracted at short, regular intervals like a string of beads; bead-like |
hydrocarbon | an organic molecule, such as methane (CH4), which consists only of carbon and hydrogen atoms |
cytometer | an instrument for counting cells |
solar wind | Mass of ionized gas emitted to space by the Sun |
numerical taxonomy | study of the relationships of taxa by the application of numerical similarity values to characters so as to rank into categories based on degree of overall similarity |
flagelliform | whip-shaped |
metagamy | pertains to a reproductive cycle that alternates between sexual and asexual phases |
chance | the characteristic of lacking any discernible pattern or direction, with more than one outcome being possible in a given set of circumstances. |
rectilinear | straight-lined |
plasmogamy | The fusion of the plasma membrane between a male and a female gamete. |
dehydration | Not enough fluids |
bailer | an exopod of the maxilla of decapod crustaceans, such as lobsters, that functions in regulating the flow of water in the gill chamber |
carina | any elevated ridge or keel-like structure |
ribosomes | Small cellular particles made up of ribosomal RNA and protein |
metazoa | Multicellular animals with a nervous system and tissues. |
pinnule | a side branch structure on the tentacle of soft corals, giving them a feathery appearance |
imagery | visible representation of objects and (or) phenomena as sensed or detected by cameras, infrared and multispectral scanners, radar, and photometers |
osmole | a unit of osmotic pressure used in cell biology and physical chemistry |
rna | abbreviation of ‘Ribonucleic acid‘. |
nitrogen cycle | Model that describes the movement of nitrogen in its many forms between the hydrosphere, lithosphere, atmosphere and biosphere. |
bradytelic | an exceedingly slow rate of evolution manifested by slowly evolving lineages which survive much longer than would be expected |
family medical history | Information about the medical conditions that affect your family members |
guard cell | A specialized epidermal plant cell that forms the boundaries of the stomata. |
gdnf | Abbreviation for "Glial cell-derived neurotrophic factor." GDNF is part of a family of naturally occurring human growth factors (also known as trophic factors) known to nourish and foster the growth and development of dopamine-generating neurons |
mesopause | Thin boundary layer found between the mesosphere and the thermosphere |
cluster | The grouping of similar objects in a multidimensional space. Clustering is used for constructing new features which are abstractions of the existing features of those objects |
continental shelf | the zone of the sea floor that stretches from the continent to the continental slope where there is a steep slope to deep water. |
pyroxene | A group of single chained inosilicate minerals whose basic chemical unit is the silica tetrahedron (SiO4) |
passive integrated transponder | a small microprocessor enclosed in glass which is injected into the shoulder muscle or flipper of sea turtles as a method of identifying individuals |
allele | An alternative form of a gene |
tissue | An integrated group of cells with a common function, structure, or both. |
absolute zero | the temperature at which all motion will cease (0 degrees Kelvin or -273.15 degrees C) |
random walks | A sequence of random changes; the total change is the sum of all the random steps. |
lithosphere | the outer solid part of the earth, including the crust and uppermost mantle |
polaris | see North Star |
tubercle | any small, usually hard, knobby excrescence or lump |
windward | refers to the side of an island or reef that faces the prevailing wind |
heavy chain | The heavier of the two types of immunoglogulin chains. |
freeze-thaw action | Processes associated with daily and seasonal cycles of freezing and melting. |
fixed | When all copies of a gene carry the same allele, that allele is said to be fixed. |
carbon cycle | Storage and cyclic movement of organic and inorganic forms of carbon between the biosphere, lithosphere, hydrosphere, and atmosphere. |
slug | a pulmonate or opisthobranch gastropod in which the shell is absent, or reduced and buried within the mantle |
reflexed | bent or turned backwards |
processed transcript | Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories. |
breeding season | that period of a year in which organisms are sexually active |
hinge | the elastic part of a bivalve (Mollusca) shell that unites the valves along the top of the shell |
protocol | The plan or set of instructions that tells an investigator (generally a physician) how to conduct a clinical trial. |
coelenterata | an older name for the phylum Cnidaria |
overbank flow | Movement of flood waters outside a stream channel during period of high discharge. |
solitary coral | coral polyps can be solitary or colonial |
fibrillose | covered with or containing fibrils |
sampling bias | the tendency of a sample to exclude some members of the sampling universe and over-represent others |
meter | a unit of length which constitutes the basis of the Metric System |
genotypic value | Value of a genotype measured for a single locus as the phenotypic value associated with the genotype minus the average phenotypic value of the two homozygotes. |
strategic plan | a document used by an organization to align its organization and budget structure with organizational priorities, missions, and objectives |
habitat patch | an area distinguished from its surroundings by environmental discontinuities |
epistasis | a gene interaction where one gene masks another one |
ocean color | a term that refers to the spectral dependence of the radiance leaving a water body |
launch | to start up any computer program by clicking on its icon or selecting it from the Start menu |
acuminate | a shape which gradually tapers to a point |
dissolved oxygen | the concentration of oxygen dissolved in water, expressed in mg/l or as percent saturation, where saturation is the maximum amount of oxygen that can theoretically be dissolved in water at a given temperature and pressure |
grounding | a ship's striking a shoal or reef |
arccatalog | similar to Windows Explorer, ArcCatalog was designed by ESRI to transfer ESRI and other database documents without corrupting their file structure |
tom. | volume (tomus) |
canalization | The buffering of development such that the same form is produced despite genetic and environmental perturbations. |
x-over | An abbreviation for cross-over. |
microwave radiation | Form of electromagnetic radiation with a wavelength between 0.1 to 100 centimeters. |
l | Lactating |
coral holobiont | see "holobiont" |
darwin medal | the most prestigious award given by the International Society for Reef Studies (ISRS), presented every four years at the International Coral Reef Symposium |
terminal moraine | Moraine that marks the maximum advance of a glacier. |
dip net | a small mesh bag, sometimes attached to a handle, shaped and framed in various ways |
extremophile | An organism that grows optimally in extreme conditions, including extreme temperature, pressure, pH, ionic concentration, and pressure. |
cacophonous | having a harsh, unpleasant sound |
allometry | study of the relative growth relationships between different parts of an organism; mathematically expressed by the allometric equation y = mx + b, where y = predicted size of body part; x = observed body weight; m = slope acquired; and b = the value of y where it intercepts the vertical axis |
mesocosm | an experimental apparatus or enclosure designed to approximate natural conditions, and in which environmental factors can be manipulated |
coelenteron | the gastrovascular (digestive) cavity of a cnidarian or ctenophore |
nomen oblitum | in taxonomy, a forgotten name; an unused senior synonym rejected under the provisions of the International Code of Zoological Nomenclature |
sign | Any objective aberration or manifestation of disease indicated by change in structure. |
direct solar radiation | Solar radiation received by the Earth's atmosphere or surface which has not been modified by atmospheric scattering. |
von willebrand's disease | A bleeding disorder in which a blood protein called von Willebrand factor is either missing or does not function properly |
cinclide | one of many blister-like openings in the lower part of the body column of some anemones, through which the animal expels long, thread-like acontia |
backshore slope | Sloping bank landward of the shore |
automatic selection | The increase in frequency of an allele that increases the rate of selfing |
burrows–wheeler transform | This reorders the characters within a sequence, which allows for better data compression |
laterite | Hard subsurface deposit of oxides of aluminum and iron found in tropical soils where the water table fluctuates with seasonal changes in precipitation. |
extrusive igneous rock | Igneous rock that forms on the surface of the Earth |
constitutive | Referes to a gene that is always expressed. |
harmonics | pertaining to sound, harmonics are multiples of the fundamental frequency (a single sine wave) |
picture element | in a digitized image, this is the area on the ground represented by each digital value |
holothurin | a toxic substance released by some holothuroids (sea cucumbers) |
melanistic | dark or blackish |
body plan | the basic symmetry and architecture of an organism; the distinctive anatomical arrangement of fundamental structural elements such as the skeleton or shell; circulatory, respiratory and nervous systems; digestive tract; and appendages. |
pluton | A large body of intrusive igneous rock that crystallizes below the Earth's surface. |
resident | a permanent, non-migratory inhabitant |
reagent | Substance used in research and diagnostic applications |
social evolution | The study of the evolutionary consequences of interactions between individuals. |
cns | Abbreviation for "Central Nervous System," a term referring to the brain and spinal cord. |
variance | Measure of the degree of dispersion associated with a characteristic |
variance component | A contribution to the phenotypic variance due to a specific kind of variation |
incross | Outcross |
protoplasm | the complex colloidal substance which constitutes the living matter of cells and performs the life process functions |
molecule | a small particle composed of two or more atoms |
gonad | ; produce spermatozoa and male |
component of variance | See variance component. |
carrier | an individual who is heterozygous for a recessive trait. |
precipitate | Solidification of a previously dissolved substance from a solution. |
greenhouse climate | A period of globally warm climate thought to result from the trapping of heat at the Earth's surface by high concentrations of carbon dioxide, methane, or water vapor in the Earth's atmosphere. |
coefficient of kinship | See coancestry. |
hurricane surge | a rise in the sea surface on an open coast, often resulting from a hurricane |
dependent variable | Variable in a statistical test whose observation's values are thought to be controlled through cause and effect by another independent variable modeled in the test. |
efficiency | A measure of the speed at which a method performs. |
ectoderm | The outer layer of cells in embryonic development; gives rise to the skin, brain, and |
hypothesis | a tentative assumption made for the purpose of empirical scientific testing |
fide | on the authority of, according to, with reference to a publication or to a cited published statement |
reproductive isolation | The existence of biological factors (barriers) that impede members of two species from producing viable, fertile hybrids. |
species of concern | species about which NOAA's National Marine Fisheries Service (NMFS) has some concerns regarding status and threats, but for which insufficient information is available to indicate a need to list the species under the Endangered Species Act |
peer support | Structured relationship in which people meet in order to provide or exchange emotional support with others facing similar challenges. |
alpha animal | in animal behavior, the individual that takes a lead role and occupies the dominant position in a group |
sand sheet | Deposit of sometimes stratified less well sorted sand that almost resemble dunes |
epimeletic behavior | behavioral activities associated with care-giving or help to other individuals |
g | Gastrointestinal |
radiocarbon time | regular known rates of radiocarbon decay that are used to determine the exact ages of carbon-based life |
phaceloid coral | a coral that has corallites of uniform height which are adjoined toward their base |
control subjects | Subjects used for comparison who are not given a treatment under study or who do not have a given condition, background or risk factor that is the object of the study |
typhoon | a hurricane that forms in the western Pacific Ocean |
metamerism | in biology, the division of the body into a series of more or less similar segments (metameres), as in an annelid worm or a lobster |
belt transect | a linear or circular transect with the observation area being a specified distance on either side of the transect line |
dalton | A unit of molecular mass approximately equal to the mass of a hydrogen atom. |
radioactive isotope | an unstable isotope of an element that decays or disintegrates spontaneously, emitting radiation |
nautical chart | a chart used to navigate bodies of water |
syngameon | A botanical term, referring to a cluster of taxa that are morphologically distinct and yet exchange genes. |
nuchal | pertaining to the neck |
first revisor | in zoological nomenclature, the person who first selects one of two or more simultaneously published names that he or she believes represent the same taxon, or who selects which one of two or more taxa the name will apply to for which identical names have been simultaneously published; also applies to first selection of multiple original spellings |
sign stimulus | the effective part of an action or object that triggers a highly stereotyped innate behavior (or fixed action pattern) in an animal by means of a hypothetical neural pathway called the innate releasing mechanism (IRM) |
tropical depression | a mass of thunderstorms and clouds generally with a cyclonic wind circulation of between 20 and 34 knots |
gaussian distribution | See normal distribution. |
drumlin | A hill shaped deposit of till |
background noise | noise coming from sources other than the noise source being monitored |
plasma cell | A derivative of B cells that secretes antibodies. |
wild | living in a natural state; living in nature |
autoinducer | A chemical used in quorum sensing that is secreted by cells and then used to quantify cell density. |
lobe | a rounded projection |
carbon-14 | a radioactive isotope of carbon with a half life of 5,730±40 years that is particularly useful for dating carbonaceous materials; also called 14Carbon or radiocarbon |
shelf reef | a reef that forms on the continental shelf of large land masses |
q. v. | which see (quod vide) |
line intercept transect | a linear transect protocol where a tape is secured at each end of the transect with the tape draped over the reef in between |
megalops larva | the larval stage in brachyuran crabs that follows the zoea larval stage |
biosci | BIOSCI is a set of internet newsgroups and e-mail lists for biologists |
wind vane | an instrument used to determine wind direction |
soil porosity | The volume of water that can be held in a soil |
discomfort | Pain, uncomfortable feeling |
reciprocal translocation | When a pair of chromosomes exchange exactly the same length and area of DNA |
screen | To determine the presence or absence of a phenotype by testing for growth under different conditions (e.g., plus and minus an auxotrophic supplement or permissive and nonpermissive conditions) |
carbonate compensation depth | the depth in the ocean below which material composed of calcium carbonate (CaCO3) is dissolved and does not accumulate on the sea floor |
slip-face | The lee side of a dune where material accumulates and slides or rolls downslope. |
serious adverse event | Any untoward medical occurrence in human drug trials that at any dose results in: death, is life-threatening; requires inpatient hospitalization or prolongation of existing hospitalization, results in persistent or significant disability/incapacity, or is a congenital anomaly/birth defect. |
solar year | The time it takes the Earth to make one orbit around the Sun |
unavailable name | in taxonomy, a name which does not meet all mandatory provisions of the International Code of Zoological Nomenclature and thus has no status in nomenclature |
cephalopodium | in cephalopods (octopi, squids) the head region, consisting of head and tentacles; a muscular mass enabling the mollusk to move, with brain and sense organs at the front end, which evolved into a foot for gastropods and bivalves, or into tentacles and funnel for cephalopods |
epoch | Geologic time unit that is shorter than a period. |
paleoclimatology | Scientific study of the Earth's climate during the past. |
cyberspace | the whole range of information resources available through computer networks |
normal distribution | The bell-shaped curve that describes the distribution of the sum of a large number of independent variables. |
suborbicular | nearly circular |
cavitation | Process of intense erosion due to the surface collapse of air bubbles found in constricted rapid flows of water |
locally stable | An equilibrium is locally stable if any sufficiently small perturbation decreases in magnitude |
tidal current | a horizontal movement of the water caused by gravitational interactions between the Sun, Moon, and Earth |
data warehouse | A collection of databases combined with a flexible data extraction system. |
galápagos archipelago | a group of volcanic islands about 600 miles off the west coast of Ecuador, South America. |
roentgen | unit of x-radiation or gamma radiation |
sargassum | brown algae (Sargassum muticum) with rounded bladders that forms dense floating masses in tropical Atlantic waters, as in the Sargasso Sea |
supraorbital | an area above the eye |
fingerprint | Any technique that enables the identification of substances by the comparison of patterns |
meridional | Movement of wind or ocean waters in a direction that is roughly perpendicular to the lines of latitude. |
nearly isogenic line | A line produced by continued crossing of one line back to another, combined with selection |
data warehouses | Vast arrays of heterogeneous (biological) data, stored within a single logical data repository, that are accessible to different querying and manipulation methods. |
paraphyletic | Describes a group of organisms or genes that share a common ancestor to the exclusion of all other entities but in which some members of the group are excluded. |
period | in the geologic time scale, a unit of time less than an era and greater than an epoch |
pelvic fin | the paired fin located ventrally beneath, in front of, or behind, the pectoral fin |
ultramarine | deep blue color |
photoaffinity label | A label with a photoactivatable group that forms a covalent link with an adjacent protein upon illumination. |
compound | A substance consisting of two or more elements in a fixed ratio. |
homozygote | Two identical alleles at a genetic locus. |
resolution | A measurement of how well the smallest details of an image can be discerned |
fixed | In population genetics, a gene is said to be fixed when it has a frequency of 100%. |
micron | A unit of length equal to 10-6 meter. |
in situ reporter | RNAse protection |
population | a group of individuals of one species in the same geographical area. |
fusion | a surgical procedure in which a joint is removed and the cut ends of the bones are held together with screws or clamps |
faq | documents that list and answer the most common questions on a particular subject |
antennule | a small antenna, especially the first pair of antennae in crustaceans |
adaptive dynamics | A method for finding which phenotypes will invade a population; related to game theory |
hydrophobic | Literally means "water hating" |
sex chromosomes | The chromosomes that determine the sex of an organism |
dependent variable | the variable being measured |
c | Capacity (to make decisions) |
sampling universe | the largest entity to be described, of which the sample is a part |
dichotomous key | a tool to help identify taxa |
pluralism | The belief that there are multiple opinions about an issue, each of which contains part of the truth but none contain the whole truth. |
diploid | A cell in which all the chromosomes occur in pairs. All cells in the human body are diploid, and carry 23 pairs of chromosomes for a total number of 46, with the exception of the mature sperm and egg cells, which are haploid. |
fdr | The False Discovery Rate (FDR) is a multiple-hypothesis testing error measure indicating the expected proportion of false positives among the set of significant results |
blind test | a method of testing or experimentation, in which an independent observer records the results of any test, drug, placebo, or procedure without knowing the identity of the samples or what result might be expected |
plumage | the collective term for all the feathers that cover a bird's body |
suppression | The restoration (or partial restoration) of a wild-type phenotype by a second mutation |
cetacean | a marine mammal of the Order Cetacea |
competition | Interaction where two or more organisms in the same space require the same resource (e.g., food, water, nesting space, and ground space) which is in limiting supply to the individuals seeking it |
dnp | 2,4-dinitrophenol. |
umbo | the earliest part of a bivalve or brachiopod shell; in bivalves, it is the most dorsal section of the shell, while in brachyopods, it is the most posterior |
bootstrap | starting a business with little or no external funding. |
humidity | A general term used to describe the amount of water vapor found in the atmosphere. |
nucleus | The central cell structure that houses the chromosomes. |
hectare | a metric unit of measure for area, equal to 2.47 acres |
sst | the temperature of the layer of seawater (approximately 0.5 m deep) nearest the atmosphere |
pesticide | A chemical that kills pests. |
crenulate | a shape in which the edge is slightly scalloped |
conservative dna transposons | A DNA-based transposable element that moves itself to a new place in the genome but does not leave a copy in the original location. |
silicate | Group of minerals that have crystal structures based on a silica tetrahedron (SiO4). |
period | Geologic time unit that is shorter than an era but longer than a epoch. |
homoplasy | A similarity of traits that is not due to homology but instead to convergence or parallel evolution. |
omega-conotoxin mviia | a marine pharmaceutical extracted from the cone snail, Conus magnus |
antrum | a hollow space or cavity |
fingerprinting | In genetics, the identification of multiple specific alleles on a person's DNA to produce a unique identifier for that person |
infusion | Putting a substance into the body, usually into the blood |
real-time data | data collected by automated instrumentation and telemetered and analyzed quickly enough to influence a decision that affects the monitored system |
hereditary disorder | A pathological condition due to changes in individual genes, or groups of genes or in sections of chromosomes or whole chromosomes |
expectation | The average value of a function g(x) of a random variable x is called its expectation,where f(x) is the probability density of x. |
elevation | the height of a geographic location above a fixed reference point, often the mean sea level |
n | Nasogastric tube |
synchronous breeding | a breeding system in which all members of the population tend to breed at the same time |
x fragile | see Fragile X. |
orthology | Paralogy |
burn rate | The rate at which an unprofitable company is going through its available money. |
contour | on a map or chart, a line connecting points of equal surface value |
seed plant | Any member of the land plant group Spermophyta |
hydrophilic molecule | A polar compound that forms hydrogen bonds with water and dissolves easily in water. |
non-clastic sedimentary rock | Sedimentary rocks that are created either from chemical precipitation and crystallization, or by the lithification once living organic matter. |
interoperability | Ability of different types of databases, applications, operating systems, and platforms to function in an integrated manner. |
isthmus | a narrow strip of land connecting two larger land masses, such as the isthmus of Panama |
apiculate | ending in a short, sharp point |
recovery plan | a plan which lists the actions that must be taken and the objectives that must be reached before an organism is no longer endangered or threatened and may be removed from the list of endangered and threatened species |
laser line scan | an electro-optic imaging technique which provides the efficiency and spatial coverage of a remote survey system, at an image resolution approaching that of visual observations |
ionosphere | A region in the atmosphere above 50 kilometers from the surface where relatively large concentrations of ions and free electrons exist |
heterogametic | The sex that carries distinct sex chromosomes |
gravitational water | Water that moves through soil due to gravitational forces |
i | Immunosuppressive |
spandrels | Triangular spaces formed where two arches intersect |
crepuscular | most active at low light levels during dusk and dawn |
macro | a text file containing a sequence of commands that can be executed as one command. |
cerebral cortex | The surface of the cerebrum; the largest and most complex part of the mammalian brain, containing sensory and motor nerve cell bodies of the cerebrum; the part of the vertebrate brain most changed through evolution. |
fish kill | the sudden death of fishes due to the introduction of pollutants, toxic blooms, or the reduction of the dissolved oxygen concentration |
marginal zone lymphoma | A term used to encompass indolent B-cell lymphomas that are either MALT or monocytoid B-cell lymphoma |
maternal effect | Effect on progeny performance associated with the maternal environment provided by the maternal parent. |
meiobenthos | benthic organisms whose shortest dimension is less than 0.5 mm but greater than or equal to 0.1 mm |
mode | Statistical measure of central tendency in a set of data |
cephalization | An evolutionary trend toward the concentration of sensory equipment on the anterior end of the body. |
ice shelf | Large flat layer of ice that extends from the edge of the Antarctic ice cap into the Antarctic Ocean |
precocial | born or hatched in a fully-developed state; relatively mature and mobile from the moment of birth or hatching; the opposite of altricial |
deep water | the water beneath the permanent thermocline that usually has a low and uniform temperature |
parent population | any population considered as the source or origin for the population under study or analysis |
limnetic | Occurring in the deeper open water of lakes or ponds. |
observing system | a collection of one or more sensing elements (human and/or instrument) that reside on fixed or mobile platforms; directly or indirectly measuring environmental parameters on a defined basis meeting data user objectives |
siphuncle | a tubelike structure in the body of a shelled cephalopod, such as the chambered nautilus, extending through the partitions of each chamber of the septate shell; the term is also used to describe tubular structures that direct water flow, or as a feeding siphon of several different kinds of invertebrates |
matter | Is the material (atoms and molecules) that constructs things on the Earth and in the Universe. |
booby | the common name for large, streamlined sea birds of the family Sulidae |
corallum | a complete coral colony; a coral head |
carrier | An individual who possesses one copy of a mutant allele that causes disease only when two copies are present |
hyperlink | text or images on a Web page that, when clicked with a mouse, causes the browser to load another page of HTML |
non-permissive conditions | Growth conditions not allowing a conditionally lethal mutant to survive. |
circadian rhythm | the regular recurrence, in cycles of about 24 hours, of biological processes or activities |
buccal siphon | in tunicates, the opening through which water enters into the pharyngeal basket |
bamboo coral | an octocoral found in both warm, shallow-water and cold, deep-water marine habitats throughout the world's oceans |
double helix | The form taken by DNA (and also by double-stranded RNA |
meiosis | Adjective: mitotic. |
exploratory system | Systems that shape initially random variation so as to produce a well-coordinated functional outcome. |
genomics | Analysis of composition and interaction of genetic information |
regime | a regular pattern of occurrence or action |
author | in taxonomy, the person(s) to whom a work, a scientific name, or a nomenclatural act is attributed |
plane of the ecliptic | Hypothetical two-dimensional surface in which the Earth's orbit around the Sun occurs. |
eon | a unit of time equal to 1 billion years |
bathypelagic zone | a layer (zone) of the ocean which lies just beneath the mesopelagic zone |
marine managed area | see: Marine Protected Area |
solar noon | Point of time during the day when the Sun is aligned with True North and True South. |
intertidal zone | The shallow zone of the ocean where land meets water. |
attendant male | a male fish which is not a member of a spawning pair, but hovers close by; often a sneaky male |
ccd camera | A camera that uses CCD (charge coupled device) chips to convert photons to electrical or digital information. |
zinc finger domain | A type of DNA binding domain consisting of loops containing cysteine and histidine residues that bind zinc ions. |
band | a thick, pigmented vertical marking that encircles the circumference of an organism's body |
warm front | A transition zone in the atmosphere where an advancing warm air mass displaces a cold air mass. |
hydrologic cycle | Model that describes the movement of water between the hydrosphere, lithosphere, atmosphere, and biosphere. |
molecular biology | The interpretation of biological events in terms of the physics and chemistry of molecules within cells. |
nitrogen dioxide | A gas produced by bacterial action in the soil and by high temperature combustion |
kirchoff's law | This law suggests that good emitters of radiation are also good absorbers of radiation at specific electromagnetic radiation wavelength bands |
c | Carboxyl group |
brooding | parental care of young |
cutaneous | pertaining to the skin |
db_info | Identifies the database source of information. |
watch and wait | A period of using no treatment or little treatment and seeing how the lymphoma progresses |
helix | a structure with a spiral shape |
internal fertilization | Reproduction in which sperm are typically deposited in or near the female reproductive tract and fertilization occurs within the tract. |
deme | /DEEM/ n |
neuroprotective | Providing protection to or stimulating the regrowth of any part of the body's nervous system |
conule | an empty, somewhat conical elevation on the surface of some sponges |
cardinal | deep scarlet red color |
solid | A state of matter where molecules where the mass of the substance does not have the property of flow. |
remission | The complete disappearance of cancer cells and symptoms |
seawall | a massive structure built along the shore to prevent erosion and damage by wave action |
underwater db | the unit used to measure the intensity of an underwater sound |
immersed corallite | a corallite that is embedded in the surrounding coenosteum |
coarse sediment | a sediment made up of coarse-grained materials, such as sand or gravel particles |
nonionizing radiation | radiation that carries enough energy to excite an atom or molecule, but not enough energy to remove an electron from the atom or molecule |
gaia hypothesis | The Gaia hypothesis states that the temperature and composition of the Earth's surface are actively controlled by life on the planet |
serotonin | A brain neurotransmitter that may be deficient in some cases of depression and whose potential role in Parkinson's disease is under investigation. |
fucoid | seaweed-shaped |
poisson distribution | A statistical test developed by Simeon Poisson |
ratite | Member of the group of flightless birds. |
idiogram | An idealized drawing. |
powerpoint: | a program in the Microsoft Office suite which allows users to create presentations and handouts |
heritability | The fraction of phenotypic variance that is inherited |
chromatin | For examples of their action, see under chromatin remodeling. |
haldane’s rule | When in the offspring of two different animal taxa, one sex is absent, rare, or sterile, that sex is the sex with heterozygous sex chromosomes |
coefficient of correlation | Statistical measure of resemblance, at the population level, between two individuals for the same character, or the covariation between two characters in the same individual. |
allele | Name for different forms of a gene |
temperature inversion | Situation where a layer of warmer air exists above the Earth's surface in a normal atmosphere where air temperature decreases with altitude |
insecta | a class of arthropods characterized by a body divided into three parts (head, thorax, and abdomen); the head has compound eyes and the thorax has three pairs of legs. |
biotechnology | Biological techniques applied to research and product development. |
icon | a small picture displayed on a computer monitor that identifies a command or file. |
supraesophageal ganglion | in arthropods, worms, and other invertebrates, the supraesophageal ganglion forms the brain, which typically contains integrative centers for the major senses |
developed country | describes nations or countries with social, cultural, industrial and technological advancement |
fibrous | Like scar tissue |
euchromatin | The less condensed form of eukaryotic chromatin that is available for transcription. |
coral | a general term used to describe a group of cnidarians; indicates the presence of skeletal material that is embedded in the living tissue or encloses the animal altogether |
accession id | A unique alphanumeric character string that is used to identify unambiguously a particular record in a database |
base | a substance that reduces the hydrogen ion concentration in a solution |
chory | a suffix meaning plant dispersal by a specified agency (animals, wind, water, etc) |
strict anaerobe | An organism that cannot survive in an atmosphere of oxygen |
dermatology | /derm-ə-TAWL-ə-jee/ n |
aciculum | a chitinous basal seta or rod supporting the parapodial lobes in polychaete worms |
chromosome aberration | changes in chromosome structure or chromosome number |
cutaneous | Relating to the skin |
investigative behavior | the sensory inspection of the environment |
nucleolus | A spherical structure visible in the nucleus during interphase |
rill | A very small steep sided channel carrying water |
intratentacular budding | a type of asexual reproduction where daughter corallites grow from the inside wall of parent corallites, usually by division of the parent corallite |
nucleolus | A specialized structure in the nucleus, formed from various chromosomes and active in the synthesis of ribosomes. |
placebo | A chemically inert/inactive substance like a sugar pill |
salt marsh | a marsh periodically flooded by marine water |
distend | Stretch, expand, bloat |
striae | a thin, narrow groove or channel, or a thin line or band especially if several of them are parallel or close together |
rampart | a narrow ridge, 1-2 m high, built by waves along the seaward edge of a reef flat |
circum-pacific belt | A zone circling the edge of the Pacific Ocean basin where tectonic subduction causes the formation of volcanoes and trenches |
ganglion | a cluster of nerve tissue primarily composed of cell bodies of neurons, usually located outside of the central nervous system; a knotlike swelling of an invertebrate's nerve cord that contains a concentration of coordinating nerve cells |
somatic | Referring to an area of the body. |
carriers | Individuals who are heterozygous with respect to some recessive trait. |
sex ratio | the relative number of males and females in a population. |
efferent | moving or carrying outward or away from a central part |
emersed | rising above the water surface |
poly | a prefix meaning "many" |
silicate magma | Magma that is felsic in composition. |
gene signature | The genes that are consistently expressed in samples of a given tissue type. |
flat | very shallow and still water, usually with a sand or mud bottom |
interneuron | An association neuron; a nerve cell within the central nervous system that forms synapses with sensory and motor neurons and integrates sensory input and motor output. |
lanceolate | shaped like a lance head |
cryptogenic species | species whose endemic or alien status is unclear |
pinnate | having side branches |
reach | an arm of the ocean extending into the land |
map scale | Ratio between the distance between two points found on a map compared to the actual distance between these points in the real world. |
neutral atmosphere | Condition in the atmosphere where isolated air parcels do not have a tendency to rise or sink |
bottom trawler | a fishing vessel that uses an open-mouthed fishing net drawn along the sea bottom |
dna segment | 1 |
dry deposition | The transport of gases and minute liquid and solid particles from the atmosphere to the ground surface without the aid of precipitation or fog |
dysphagia | Difficulty swallowing |
ionic bond | A chemical bond resulting from the attraction between oppositely charged ions. |
grid | a network of uniformly spaced parallel lines intersecting at right angles |
power | See statistical power. |
normalization | The process by which microarray spot intensities are adjusted to take into account the variability across different experiments and platforms. |
noaa diving program | the NOAA Diving Program is administered by NOAA and is headquartered at the NOAA Diving Center in Seattle, WA |
allele | An alternative form of a gene. |
water pressure | the force per unit area exerted by the weight of water |
interglacial period | a warm period between glacial epochs |
body wall | the layers of tissue (epidermis, mesoglea, and gastrodermis) that make up the body of a cidarian polyp |
anastomosis | the union or connecting of branches forming a meshwork or a network |
phenetic species | a concept of species in which a species is a set of organisms that are phenotypically similar to one another |
antigen | Any substance that stimulates the production of antibodies in the body |
antibiotic resistance | the ability of a microorganism to avoid the harmful effects of an antibiotic by destroying it, transporting it out of the cell, or undergoing changes that block its effects. |
levene model | A model of a structured population in which individuals from a single gene pool spend part of their lives competing within small patches. |
uremia | Kidney failure |
mono- | a prefix meaning one |
phytotoxin | a substance similar in its properties to an extracellular bacterial toxin |
itcz | the region near the equator where the trade winds of the Northern and Southern Hemispheres converge |
nil | See nearly isogenic line. |
lander system | a scientific instrument system designed for temporary deployment on the sea floor in order to monitor environmental parameters |
ingroup | In a cladistic study of evolutionary relationships among taxa of organisms, the group of taxa that is actually being analyzed. |
lower palmata zone | the part of a reef crest that is seaward of the palmata zone |
fluorography | The detection of radiation or of a fluorescent compound by secondary light that was generated by the excitation of a "fluor" or a screen by light, a beta particle or a gamma ray. |
subduction | the process in which one lithospheric plate collides with, and is forced down under another plate |
nacre | the irridescent innermost layer of a molluscan shell that is secreted by the mantle |
anhydrobiosis | The ability to survive in a dormant state when an organism's habitat dries up. |
q | QID |
hypural plate | in fishes, the flattened bony plate at the posterior end of the vertebral column |
clinical research | Research that uses patients and healthy volunteers as study subjects. |
palmata zone | the region of a reef crest of a bank or barrier reef that is closest to the water surface |
appendicular | relating to the appendages, as opposed to axial, which refers to the trunk and head of an organism |
upper mantle | Layer of the Earth's interior extending from the base of the crust to 670 kilometers below the surface |
cone of depression | Cone shaped depression occurring horizontally across a water table |
kilobase | One thousand bases, or pairs of bases (1000 b or 1000 bp) |
mareano | a Norwegian program to survey and perform basic studies of the seabed's physical, biological, and chemical environment and to systematize the information in a marine area database that will cover Norway's coastal and marine region |
monofilament | a single large filament or threadlike structure of a synthetic fiber, such as a monofilament fishing line |
midlittoral zone | the portion of the intertidal zone that is covered and uncovered by water each day |
genus | A group in the classification of organisms |
montreal protocol | Treaty signed in 1987 by 24 nations to cut the emissions of chlorofluorocarbons (CFCs) into the atmosphere |
ice wedge | Wedge-shaped, ice body composed of vertically oriented ground ice that extends into the top of a permafrost layer |
fog | Fog exists if the atmospheric visibility near the Earth's surface is reduced to 1 kilometer or less |
echinoid | common name for any member of the class Echinoidea, typified by sea urchins |
microarray | Arrangement of miniaturised test sites on a small surface; spot sizes are usually less than 250µm |
transformation | Change in the genetic structure of an organism by the incorporation of foreign DNA. |
osmotic pressure | The pressure generated by the mass flow of water to that side of a membrane-bounded structure that contains the higher concentration of solute molecules |
mean sea level | the level of the surface of the sea between mean high and mean low tide |
repeat sequences | The length of a nucleotide sequence that is repeated in a tandem cluster. |
center line | the imaginary line running from bow (front) to stern (rear) along the middle of a vessel |
edema | Swelling of a body part caused by an abnormal buildup of fluids. |
cosexual | Producing both male and female gametes |
recombinant dna | the new DNA resulting from combining two or more types of DNA. |
autosome | A chromosome that is inherited in the usual Mendelian way, in contrast to sex chromosomes and mtDNA. |
succession | See Ecological succession. |
diagnosis | identifying the nature or cause of some phenomenon; in pathology, (1) the act or process or deciding the nature of a disease by examination and observation, (2) a careful investigation of the facts to determine the nature of a thing, and (3) the decision resulting from either of these |
dimorphic | Having two forms. |
superfund | money collected from a special tax on chemical feedstocks and raw petroleum |
transcript id | Ensembl transcript identifiers are unique for each splice variant. |
halocline | the boundary where there is a marked change in salinity between surface fresh water and underlying saltwater in a stratified coastal environment |
inconclusive | A situation in which no conclusion can be reached regarding testing done due to one of many possible reasons (e.g., no results obtained, uninterpretable results obtained, no exemplar/standard available for testing). |
zoosemiotics | the study or analysis of animal communication |
mantle | Layer of the Earth's interior composed of mostly solid rock that extends from the base of crust to a depth of about 2,900 kilometers. |
major transitions | Identified by Maynard Smith and Szathmáry as major changes in the way hereditary information is transmitted |
mgi | Mouse Genome Informatics |
normal lapse rate | Average rate of air temperature change with altitude in the troposphere |
mareogram | a graphic representation of the rise and fall of the sea level, with time as abscissa and height as ordinate, usually used to measured tides; may also show tsunamis; also called 'marigram' |
solvolysis | a reaction with a solvent involving the rupture of one or more bonds in the reacting solute |
navicular | boat-shaped |
gap analysis | a Geographic Information System (GIS) methodology to identify the distribution of biodiversity over large spatial areas |
permanent environmental effect | Non-genetic effect which influences all observations on an individual for the same trait, hence causing an additional covariance between the repeated measures. |
subspecific name | the third term of the trinomen, a subspecies |
alate | winged |
vicariance | The fragmentation or fusion of a species range as a consequence of processes such as plate tectonic or glacial movements. |
thoracic | pertaining to the chest area |
suborbital | an area below the eye |
theistic evolution | A view in which religious teachings are seen as compatible with biological evolution |
systemic | a condition or process that affects the body as a whole, not localized to one area or system |
picomole | One trillionth mole; 10-12 mole. |
discoplacental | /DISK-oh-plu-SENT-əl/ adj |
xeric | arid; characterized by dry conditions; requiring only a small amount of moisture |
holoeuryhaline | pertains to organisms that inhabit fresh, brackish and marine waters |
paleoclimate | Climatic conditions in the geological past reconstructed from a direct or indirect data source. |
plume | in hydrodynamics, a plume is a column of one fluid moving through another; a long, feather-shaped cloud of steam or gases; a volume of a substance that moves from its source to places farther away from the source; the fluid formation that is created as hydrothermal vent waters are injected into the ocean from the sea floor; an area of chemicals in a particular medium, such as air or groundwater, moving away from its source in a long band or column; the anterior portion of the body of a vestmentiferan tube worm which extends out of the tube into the water |
dtdp | Thymidine diphosphate. |
flushing | the exchange of water between an estuary or coastal waterway and the ocean |
spawning | in corals, the release of gametes into the water |
genetic load | Average number of lethal alleles per individual in a population. |
notochord | A flexible rod-like structure that forms the main support of the body, a primitive backbone. |
consistency | A measure of whether, given sufficient data, a method will generate a correct answer. |
coacervate | an aggregate of colloidal droplets held together by electrostatic forces |
anonymous ftp | A method of sharing files on the Internet |
recessive lethal | See lethal. |
posit | a proposition that is accepted as true in order to provide a basis for logical reasoning; take as a given; assume as a postulate or axiom |
valley fog | Fog formed by the movement of cooler, more dense air from higher elevations to the warm valley bottom. |
megabyte | a measure of storage space |
reverse fault | This vertical fault develops when compressional force causes the displacement of one block of rock over another. |
supratidal | above the level of high tide; a terrestrial environment that is influenced by proximity to the sea |
thermodynamics | The branch of physics dealing with the transformation of energy, especially of heat and other forms of energy. |
atv | An application (Java tool) for the visualisation of phylogenetic trees |
coenosteum | the common surface of corallum between calices |
mitigation | the act of making less severe or intense; measures taken to reduce adverse impacts on the environment |
polyandry | A polygamous mating system involving one female and many males. |
fluctuating asymmetry | a pattern of small, random deviations between sides in the size of a given trait - the random component of bilateral asymmetry, i.e., subtle random deviations from perfect bilateral symmetry |
congenital | A condition or characteristic that is present from birth. |
motility | The ability to move |
nonsymbiotic mutualism | Mutualistic interaction where the mutualists live independent lives yet cannot survive without each other |
deciliter | /DES-ə-LEET-er/ n |
daughter cells | The cells produced by division of a single parent cell. |
unaltered fossil | a fossil which retains much or all of its original chemical and structural composition |
high tide | the tide at its fullest extent, when the water reaches its highest level |
xanthochromic | yellow or golden color |
apomorphy | A derived character state. |
two-dimensional electrophoresis | A technique used for the separation of complex protein mixtures |
svedberg unit | The unit used to express the sedimentation constant (S = 10-l3 sec) |
nudibranch | N(Y)OOD-ə-BRANK/ A member of the gastropod suborder Nudibranchia, marine opisthobranchs lacking shells |
endogenous | Arising from internal structures or functional causes. |
anchialine cave | a coastal cave formed in limestone or volcanic rock that is flooded with seawater |
percutaneous | Through the skin |
neurotoxin | a toxic substance which interferes with the electrical activities of nerves and inhibits, damages or destroys the tissues of the nervous system, especially neurons (nerve cells) |
reef slope | the portion of a reef seaward of reef crest |
hexaxon | in sponges, a spicule with six rays |
nomen illegitimum | in taxonomy, an illegitimate name; a validly published name that must be rejected for the purposes of priority in accordance with the International Code of Zoological Nomenclature |
dmf | Dimethylformamide. |
rich medium | A growth medium in which not all the components have been identified |
atoke | the anterior, nonreproductive part of a marine polychaete worm, as distinct from the posterior, reproductive part (epitoke) during the reproductive season |
in vitro packaging | Synthesis of infective phage particles from a preparation of phage capsid proteins and a concatamer of phage DNA molecules |
cheliped | one or more pairs of thoracic legs of decapod crustaceans that terminate in a chela, or claw |
subsidence | Lowering or sinking of the Earth's surface. |
microtransponder | Cube-shaped (~100µm), miniature radio-frequency transmitters out of silicon |
surface interval | the length of time that a scuba diver spends on the surface between two consecutive dives |
melon | a lens-shaped fatty deposit lying in the facial depression of many toothed whales, such as the bottle-nosed dolphin |
tributyltin | a component of antifouling paints used on the hulls of vessels which may pose a threat to coral reefs |
tumor burden | The amount of cancer cells that are present in the body. |
solar year | the time it takes the Earth to make one orbit around the Sun; approximately 365.2422 days |
discicristate | A kingdom of eukaryotes |
protected area | a legally established land or water area under either public or private ownership that is regulated and managed to achieve specific conservation objectives |
proximate | immediate or nearest; closest in degree or order (space or time); very close in space or time |
aerial root | a root which grows out from the stem above ground level |
tdt | See transmission disequilibrium test. |
micron | A unit of measurement equal to 0.001 mm or approximately 1/25,000 of an inch. |
gas chromatograph/mass spectrometer | an instrument that identifies the molecular composition and concentrations of various chemicals in water and soil samples |
hydropic | having an excess of water or watery fluid |
nerve fiber | A filamentous process extending from the cell body of a neuron and conducting the nerve impulse; an axon. |
encrustation | a crustlike deposit or growth over a substratum |
tinnitus | Ringing in the ears |
bipectinate gill | in mollusks, refers to having gill lamellae on both sides of the ctenidial axis |
altricial | born or hatched undeveloped; requiring maternal care after birth; as opposed to precocial |
sigmoid growth | a growth rate trend characterized by an elongated S–shaped, or sigmoid curve |
dodecandrous | adj |
genome size | The size of a single haploid genome |
technology transfer | the transfer of discoveries made by basic research institutions, such as universities and government laboratories, to the commercial sector for development into useful products and services. |
position-specific scoring matrix | (PSSM) |
sovereign | an independent or non-independent jurisdiction which itself possesses or whose people possess in their own right the jurisdiction's supreme authority, regardless of the jurisdiction's or people's current ability to exercise that authority |
sampling variation | Chance differences in statistics describing a set of observations that occurs when repeating the experiment with a new sets of observations. |
subplocoid form | a coral growth form in which the corallites are sometimes separated by coenosteum |
evolutionary psychology | A field that applies evolutionary principles to understand universal human traits |
centrifugation | the spinning of a mixture at very high speeds to separate substances of different densities |
convergent evolution | the appearance of similar characteristics in two or more taxa by independent lines of descent. |
biogeochemical cycle | the chemical interactions among the atmosphere, biosphere, hydrosphere, and lithosphere |
vm | See mutational variance. |
captaculum | a filamentous tactile organ with an adhesive, sucker-like end near mouth of a tusk shell (mollusks in the class Scaphopoda).The captacula are used to gather small particles of food in the sand and pass them to the mouth |
density-gradient centrifugation | Separation of molecules and particles on the basis of buoyant density, by centrifugation in a concentrated sucrose or caesium chloride solution. |
confirmatory test | A simplistic method for estimating genotype frequency by direct counting of the number of times a genotype is observed in a database. |
isauxesis | equality in growth; isometry |
controlling interest | ownership of more than 50 percent of a company's voting shares. |
free dive | diving without the assistance of any breathing apparatus, such as scuba |
planula | a ciliated planktonic larval form produced by some anthozoans |
standard deviation | A statistical measure of the dispersion of observation values in a data set |
lacuna | a cavity ("little lake") in a matrix-like substance |
carriers | Substances or particles that can transfer genes into a cell |
mismatch repair | A repair system that removes mismatched bases from newly synthesized DNA strands. |
siphonophore | siphonophores are "colonial jellyfish" which have swimming bells at the top, and tentacles with stinging cells below that help them to catch their prey |
deposit | material left in a new position by a natural transporting agent, such as water, wind, ice, or gravity, or by human activity |
aculeate | bearing a sharp point |
density | The number of individuals per unit area or volume. |
partial pressure | the pressure exerted by a single component of a gas within a gas mixture, or dissolved in a liquid |
denial | A process of automatically blocking awareness of painful realities, thoughts, or feelings in order to protect oneself from emotional distress. |
serrate | saw-like; notched |
ovoid | egg-shaped |
cloning | the process of making genetically identical copies. |
mammal | Group of warm blooded vertebrate animals |
convection | The mass movement of warmed air or liquid to or from the surface of a body or object. |
accuracy | The reliability of a procedure; freedom from making mistakes. |
alkaline | having a pH of more than 7 |
unrooted tree | A phylogenetic tree in which the root is not shown (frequently because it is not known). |
advection | the transport of substances in a fluid by the flow of that fluid |
serial homology | representative or repetitive relation in the segments of the same organism, as in the lobster, where the parts follow each other in a linear series; repeated structures within an organism that have similar developmental origins |
partial pressure | A measure of the concentration of one gas in a mixture of gases; the pressure exerted by a particular gas in a mixture of gases (for instance, the pressure exerted by oxygen in air). |
local mate competition | Competition for mates within a local group (e.g., between fig wasps within a single fig). |
ultrameric tree | A phylogenetic tree in which the branch lengths are constrained to all be equidistant from the root |
osteichthyan | Member of a vertebrate subgroup with jaws and mostly bony skeletons. |
nicotine | An alkaloid (nitrogen-containing chemical) made by the tobacco plant or produced synthetically that is one of the major chemicals in cigarettes |
upload | transferring data (usually a file) from the computer you are using to another computer |
texture | The relative quantities of the different types and sizes of mineral particles in a deposit of sediment |
hardy-weinberg theorem | The principle that frequencies of alleles and genotypes in a population remain constant from generation to generation, provided that only Mendelian segregation and recombination of alleles are at work. |
cytogenetic | Refers to the correlation of genetic and cytological information through the microscopic analysis of stained preparations of chromosomes, including those from individuals carrying mutations. |
neuralgia | noo-RAL-zhə/ Sharp, shooting pain along the length of a nerve. |
isostatic depression | Large scale sinking of the crust into the asthenosphere because of an increase in weight on the crustal surface |
mhc | See major histocompatibility complex. |
phenotype | the form of a trait that an organism shows |
artifact | an object made by human workmanship, usually for some practical purpose |
e | Electronic Northerns |
carboxyl group | the -COOH functional group, acidic in nature, found in all amino acids; the acid group of organic molecules |
parenchyma cell | A relatively unspecialized plant cell type that carries out most of the metabolism, synthesizes and stores organic products, and develops into a more differentiated cell type. |
dewlap | a fold of loose skin |
confidence interval | The range of parameter values that do not deviate significantly from a null hypothesis. |
gain-of-function mutation | Hypomorphic Mutation |
phytoplankton monitoring network | a NOAA outreach program with the ultimate goal of linking laboratory scientists to the general public |
nivation hollow | Ground depression found in periglacial areas that is created by nivation. |
transformation | (1) The conversion of a normal animal cell to a cancerous cell |
intrusive igneous rock | A mass of igneous rock that forms when magma from the mantle migrates upward and cools and crystallizes near, but not at, the Earth's surface |
central nervous system | In vertebrate animals, the brain and spinal cord. |
dolastatin 10 | a marine pharmaceutical extracted from the marine sea hare (a snail) Dolabella auricularia |
sensory receptor | A specialized structure that responds to specific stimuli from an animal's external or internal environment; transmits the information of an environmental stimulus to the animal's nervous system by converting stimulus energy to the electrochemical energy of action potentials. |
molariform | shaped like a molar tooth, being rounded and flattened |
delta plain | a nearly horizontal portion of a delta which during low tide is largely exposed to the atmosphere |
abdominal fin | a term used to describe the location of the pelvic (ventral) fins when they are inserted far behind pectorals |
lotic | refers to a flowing or running body of fresh water, i.e., streams and rivers |
generative nucleous | One of the two male gametes in the pollen tube of angiosperms. |
convection | vertical air circulation in which warm air rises and cool air sinks, resulting in vertical transport and mixing of atmospheric properties; transfer of heat by the movement of air or water; the rise of an air mass caused by warming over land or sea that often causes the formation of clouds |
wet-bulb thermometer | Thermometer on a psychrometer that has a moisten wick on its reservoir bulb |
celsius scale | A temperature scale (°C) equal to 5/9 (°F – 32) that measures the freezing point of water at 0°C and the boiling point of water at 100°C. |
group selection | Selection of traits that increase survival and proliferation of groups of individuals. |
langley | Unit of the intensity of radiation measured per minute and equal to one calorie. |
fore reef | the portion of a reef seaward of reef crest |
maritime climate | a climate strongly influenced by an oceanic environment, found on islands and the windward shores of continents |
calculus | a stone-like structure formed within the body, particularly in the gall bladder (gallstone), bladder (bladder stone) and kidneys (kidney stone); the branch of mathematics that is concerned with limits and with the differentiation and integration of functions |
temperature | A measure of the intensity of heat in degrees, reflecting the average kinetic energy of the molecules. |
rhizome | a horizontal stem |
ploidy | refers to the number of sets of chromosomes |
pistil | Female floral structure comprised of the ovary, style and stigma. |
government document | a publication produced by a government agency |
adobe acrobat | Acrobat Reader is a software product from Adobe, designed to view .pdf (portable document format) documents downloaded from the World Wide Web |
gentamicin | A type of aminoglycoside antibiotic |
beche-de-mer | commercially harvested sea cucumbers (Class Holothuroidea) |
soil erosion | Transport of soil mineral particles and organic matter by wind, flowing water, or both |
in silico | (Lit |
online | a general term for when one computer is interacting directly with another computer |
nucleus | Membrane-bound structure found in all eukaryotic cells that contains DNA for the cell in the form of chromatin. |
solute | the chemical substances dissolved in a solution, such as salts in seawater |
deae | Diethylaminoethyl cellulose. |
monitor | Check on, keep track of, watch carefully |
trap | a portable, enclosed device with one or more gates or entrances and one or more lines attached to surface floats; also called a pot |
membrane potential | The charge difference between a cell's cytoplasm and the extracellular fluid, due to the differential distribution of ions |
heterocyst | A specialized cell that engages in nitrogen fixation in some filamentous cyanobacteria. |
renal | Pertaining to the kidney |
anonymous work | according to the International Code of Zoological Nomenclature, a published work that does not state the name of the author(s) |
uv absorbance spectroscopy | A method for measuring the concentration of a compound by determining the amount of ultraviolet radiation absorbed by a sample. |
molt | to shed part or all of a coat or outer covering, such as, shell, feathers, cuticle or skin, which is replaced periodically by a new growth |
discodactylous | /DISK-oh-DAK-təl-əs/ adj |
intrinsic | belonging to a thing by its very nature; the essential nature or constitution of a thing; inherent; in and of itself |
solar radiation | the amount of radiation or energy received from the sun at any given point |
tetrapod | a vertebrate animal with four legs or leg-like appendages. |
scrotum | Skin and associated tissues surrounding the testes. |
skewness | A measure of the degree to which a distribution is asymmetrical |
school | a social group of fishes (and some other aquatic animals), usually of the same species, which tends to orient and move in the same direction |
learning | The process that leads to modification in individual behavior as the result of experience. |
poisson model | A probability distribution that is often used to model the number of random events in a fixed interval |
sign stimulus | An external sensory stimulus that triggers a fixed action pattern. |
allotopic | refers to species with overlapping ranges but do not occupy the same space |
tit-for-tat | The winning strategy in the repeated Prisoner’s Dilemma game. |
orthogenesis | An inherent tendency for lineages to change in a particular direction. |
passive remote sensing | Form of remote sensing where the sensor passively captures electromagnetic radiation reflected or emitted by an object. |
monophyletic group | a group of organisms descended from a common ancestor |
constitutive | Produced in a constant amount, not subject to regulation |
brachy- | a prefix from the Greek, meaning "short" |
centrad | toward the center or interior |
creel survey | a survey of anglers in a particular area to discover the types and numbers of fish caught |
synapse | the site where neurons communicate with each other |
hemimethylation | Double stranded DNA in which only one strand is methylated at a particular site |
kenozooid | a small bryozoan heterozooid that strengthens and supports the colony, as well as fill spaces; long, branching, tubular, transparent stolons which extend above the substratum and to which the feeding individuals (autozooids) are attached |
replicator | Any entity that can replicate |
germ layer | The most primitive level of tissue organization |
microdictyon | a genus of non-calcareous, fleshy green macroalgae which can form green mats or turf on the substrate; also an extinct "armored worm" known from the Early Cambrian Maotianshan shale of Yunnan, China |
estimate | the best guess arrived at after considering all the information given in a problem |
splenectomy | Surgical removal of the spleen |
photosynthetic capacity | the maximum photosynthetic rate per unit of biomass |
lee | Side of a slope that is opposite to the direction of flow of ice, wind, or water |
neupogen | See Granulocyte Colony-Stimulating Factor (G-CSF) |
papahanaumokuakea marine national monument | the Hawaiian name for the Northwestern Hawaiian Islands Marine National Monument |
arcuate | crescent-shaped |
base | One of a set of nitrogenous compounds attached to the sugar-phosphate backbone in a nucleic acid |
dart | a structure of an invertebrate animal that pierces or wounds; a small, narrow-pointed missile that is thrown or shot |
signal-to-noise ratio | the difference between the source level of a sound signal from a source and the source level of the background noise |
pitch | A function of a sound wave's frequency, or number of vibrations per second, expressed in hertz. |
data mining | The automated or semi-automated search for relationships and global patterning within data |
amino group | The -NH2 group, a weakly basic group found in organic molecules. |
bit score | The bit score is derived from the raw alignment score in which the statistical properties of the scoring system used have been taken into account |
imprinting | A type of learned behavior with a significant innate component, acquired during a limited critical period. |
deciduous | /də-SID-joo-əs/ adj |
phenotypic value | The actual value P of a quantitative trait, which is made up of contributions from both genotype and environment (P = G + E). |
metal shadowing | An electron microscopic technique in which the surface of a specimen is coated with a thin layer of evaporated metal. |
antillean z trap | a common type of fish trap used widely in the Caribbean and elsewhere |
white blood cell count | Measurement of the total number of white blood cells in a sample of blood |
asymmetry | the lack or absence of balanced proportions between parts of a thing; without symmetry |
evapotranspiration | The evaporation of water from soil plus the transpiration of water from plants |
programmed cell death | A normal physiological form of cell death characterized by apoptosis. |
pyrolysis | the destruction of a chemical compound by heating or burning |
clay | Mineral particle with a size less than 0.004 millimeters in diameter |
circle of illumination | A line that bisects areas on the Earth receiving sunlight and those areas in darkness |
truncate | having the end squared off |
nitrox | any mixture of nitrogen and oxygen that contains less than the 78 percent nitrogen as found in ordinary air |
glacial milk | Term used to describe glacial meltwater which has a light colored or cloudy appearance because of clay-sized sediment held in suspension. |
gynetype | a female type specimen |
passive transport | The diffusion of a substance across a biological membrane. |
low-complexity region | A region in the sequence with a biased composition (i.e |
capsule | (1) A sticky layer that surrounds the cell walls of some prokaryotes, protecting the cell surface and sometimes helping to glue the cell to surfaces |
locus | The physical site or location of a specific gene on a chromosome |
carbonate bank | a narrow, fairly flat, shallow, submarine plateau (measured in tens of meters) of composed of limestone (carbonate rock), e.g., the Bahama Banks |
hormone | A signaling molecule produced by an endocrine gland that acts on cells at distant body sites. |
telocentric | A chromosome with the centromere in the middle. |
children | In bioinformatics, this term refers to terms in a hierarchical controlled vocabulary like ones containing Gene Ontology (GO) terms |
rectangular coordinate system | System that measures the location of points on the Earth on a two-dimensional coordinate plane |
organic act | the body of laws that the United Congress has enacted for the government of a United States insular area; it usually includes a bill of rights and the establishment and conditions of the insular area's tripartite government |
trunk | the body of a vertebrate animal excluding the head, limbs and tail. |
atomic number | The number of protons in the nucleus of an atom, unique for each element and designated by a subscript to the left of the elemental symbol. |
protein secondary structure | The interactions between amino acids within a protein chain to form an a helix and b sheet structure. |
neutral evolution | Evolving without the influence of natural selection. |
ultraviolet radiation | The part of the invivible electromagnetic spectrum (just below violet) with wavelengths between about 100-400 nm. |
affinity index | a measure of the relative similarity of the composition of two samples |
cloning | The process of producing a genetically identical copy |
controlled experiment | a scientific experiment, in which results from an experimental group with variable conditions, is compared with a control group with nonvariable conditions |
brachial | pertaining or belonging to the arm |
hydrostatic pressure | Force caused by water under pressure. |
optic chiasm | The arrangement of the nerve tracts of the eye such that the visual sensations from the left visual field of both eyes are transmitted to the right side of the brain and the sensations from the right visual field of both eyes are transmitted to the left side of the brain. |
hydrophobicity | (lit |
evolution | All the changes that have transformed life on Earth from its earliest beginnings to the diversity that characterizes it today |
apopyle | the opening of a choanocyte chamber of a sponge into an excurrent canal |
pyranometer | an instrument that measures the amount of radiation. |
analysis of variance | A statistical test for determining differences in mean values between two or more groups. |
tautomerization | The spontaneous isomerization of a nitrogen base from its normal keto (or amino) form to an alternative hydrogen-bonding enol (or imino) form. |
formalin | formaldehyde gas dissolved in water |
amplification | An increase in the number of copies of a specific DNA fragment; can be in vivo or in vitro |
deductive reasoning | A type of logic in which specific results are predicted from a general premise. |
cartography | Field of knowledge that studies map construction |
benefit | A valued or desired outcome; an advantage |
nuclear magnetic resonance | A spectroscopic technique used to determine the 3-D structure of small- to medium-sized proteins |
seawater | The mixture of water and various dissolved salts found in the world's oceans and seas. |
soniferous | sound producing |
fulvous | dark yellow, orange-yellow |
decalcification | the loss of calcium salts from living tissues |
decubitus | /də-KYOOB-ə-təs/ n |
ethics | Ethics is a branch of philosophy that deals with morality |
assemblage | a group or association of interacting populations of organisms in a given area or volume |
stipitate | body mass supported by a long stalk or stipe |
ballast | a weight at the bottom of the boat to help keep it stable |
ground ice | General term used to describe all bodies of ice in the ground surface of the permafrost layer |
kleptoparasitism | stealing from one animal by another; also called "piracy" |
mortality | the death rate; the ratio of the total number of deaths to the population of a specified area in a given time period |
circadian rhythm | A physiological cycle of about 24 hours that is present in all eukaryotic organisms and that persists even in the absence of external cues. |
dgva | The Database of Genomic Variants archive is a repository that provides archiving, accessioning and distribution of publicly available genomic structural variants, in all species. |
anther | The male reproductive organ where pollen is produced in a flowering plant. |
central nervous system | The brain and spinal cord |
conchology | the study of shells |
endangered taxa | taxa in danger of extinction and whose survival is unlikely if causal factors continue operating |
autonomous underwater vehicle | an unmanned, battery or fuel cell-operated underwater robot or vehicle which can operate at depths greater than 6000 meters |
plesimorphy | An ancestral character state. |
correlation | a relation between a variable and one or more related variables |
f | Fingerprint |
osteogenesis imperfecta | a condition also known as brittle bone disease; characterized by a triangular shaped face with yellowish brown teeth, short stature and stunted growth, scoliosis, high pitched voice, excessive sweating and loose joints. |
exponent | an expression of the number of times that a base is used as a factor |
tabulate | having a flat surface |
median | a statistical measure of central tendency |
basic research | research conducted with the sole goal of obtaining knowledge; in contrast with applied research |
hereditary | Something that is passed on from a parent to the child, usually through the genes. |
inorganic matter | chemical substances of mineral origin which contain no organically produced carbon |
database management system | a set of computer programs for organizing the information in a database |
lesion | An area of cell damage or cell death. |
spectrophotometry | The determination of the structure or quantity of substances by measuring their capacity to absorb light of various wavelengths. |
aerenchyma | a specialized parenchymous tissue in seagrass leaves that has regularly arranged air spaces or lacunae |
sos box | The operator sequence recognised by the LexA repressor protein. |
plug-in | a small piece of software that adds features to a larger piece of software |
parts per million | number of parts of a substance found in one million parts of a particular gas, liquid, or solid |
heliox | a breathing gas mixture for scuba divers that contains only oxygen and helium, used for deep diving to remove the narcotic effect of nitrogen |
cladistic distance | the number of branching points between any two nodes on a phylogenetic tree |
turriform | tower-shaped |
axial sheath | the coenenchyme which surrouds the axis on the Gorgonacea and Pennatulacea |
structure | See population structure. |
zootoxin | any poisonous or venemous substance produced by an animal |
genetic locus | See locus. |
secondary sex characteristics | Characteristics of animals that distinguish between the two sexes but that do not produce or convey gametes; includes facial hair of the human male and enlarged hips and breasts of the female. |
cirrus clouds | High altitude cloud composed of ice crystals |
ebris flow | A type of mass movement where there is a downslope flow of a saturated mass of soil, sediment, and rock debris. |
delta notation | the absolute abundance of an isotope is difficult to measure with accuracy |
septate shell | a shell divided into smaller chambers, as in the chambered nautilus (Cephalopoda-Mollusca) |
common name | a colloquial or vernacular name |
autapomorphy | an apomorphy (derived character differing from the ancestral condition) possessed by a species or clade that is shared with no other species or clade, i.e., a derived character found only in a terminal taxon |
ichnologist | a scientist whose area of study and research is ichnology |
wavelength | The distance between crests of waves, such as those of the electromagnetic spectrum. |
capillary action | The movement of water or any liquid along a surface; results from the combined effect of cohesion and adhesion. |
exponential growth | In populations, the increasingly accelerated rate of growth due to the increasing number of individuals being added to the reproductive base |
cytoplasm | Substance that surrounds the nucleus of the cell. |
telomere | The terminal part of a linear chromosome |
tundra | High latitude biome dominated by a few species of dwarf shrubs, a few grasses, sedges, lichens, and mosses |
artificial classification | in taxonomy, classification based on convenient or conspicuous diagnostic characters without attention to characters which indicate phylogenetic relationship; often a classification based on a single arbitrarily chosen character, rather than an evaluation of the totality of characters |
southeast trade winds | See trade winds. |
mesoderm | the middle of the three germ layers of a triploblastic embryo that gives rise to the skeletal and support, muscular, blood vascular, urogenital and reproductive systems, and contributions to some glands |
r2 | See coefficient of determination. |
independent variable | a variable controlled by the experimenter |
ethnographic research | Ethnographic research, also called fieldwork, involves observation of an interaction with the persons or group being studied in the group's own environment, often for long period of time |
arc | in a geographical information system (GIS), an arc is a line that begin and end with a node |
cellular component | One of the three categories used by the Gene Ontology project, cellular component encompasses subcellular structures, locations, and macromolecular complexes |
autosomal recessive | A pattern of inheritance where copies of the gene that do not work properly are needed in order to have the condition, and the condition affects males and females equally. |
biotechnology | Application of biological methods in technical processes and industrial production |
lateral display | a type of threat or reproductive behavior exhibited by many species of fishes, in which two male fish align beside each other, spread their dorsal, anal, and pelvic fins, and intensify the coloration of their bodies |
parent | In BioCyc, this term refers to terms in a hierarchical controlled vocabulary such as those containing Gene Ontology (GO) terms |
baroceptor | a sensory organ perceiving changes in pressure; also called "baroreceptor" |
basalt | A dark colored fine grained igneous rock formed from mafic magma. |
ada | The Americans with Disabilities Act of 1990 gives civil rights protections to individuals with disabilities and guarantees equal opportunity for individuals with disabilities in public accommodations, employment, transportation, state and local government services, and telecommunications. |
metric system | a decimal system of measures and weights with the meter and the gram as bases |
caridean shrimp | caridean shrimps can be distinguished from other shrimp-like creatures by the way in which the plate of the second abdominal segment overlaps the segments both in front and behind, forming a saddle |
probability | Chance |
artesian pressure | hydrostatic pressure of artesian water, often expressed in terms of pounds per square inch; or the height, in feet above the land surface, of a column of water that would be supported by the pressure |
anterior | morphologically, toward the head or front end of an individual, or proximal portion of a bodily part |
zone | a large-scale physical feature within the ecosystem |
biogenic reef | a mound-like layered structure built by and predominantly composed of organic remains such as shells and skeletons of sedentary organisms |
genetic code | The genetic code is written in 'words' of three letters in DNA (such as ATG, CCG, TAA and so on) |
ecosystem approach | a strategy or plan to manage ecosystems to provide for all associated organisms, as opposed to a strategy or plan for managing individuals |
growth band | a band formed yearly on coral by the secretion of CaCO3; one yearly growth band contains two smaller bands representing winter growth and summer growth |
bioinformatics | The field of endeavor that relates to the collection, organization and analysis of large amounts of biological data using networks of computers and databases (usually with reference to the genome project and DNA sequence information) |
lee | sheltered |
backscatter | the deflection of acoustic radiation in a scattering process through an angle greater than 90 degrees |
pyramid of numbers | Graphical model describing the number of organisms that exist at each trophic level in a community or an ecosystem |
doubling time | the length of time required for a population to double in size |
hydrophilic | Soluble in water. |
photolithography | Selective masking generates light patterns that direct chemical transformations to specific areas of photosensitive surfaces |
diploid | a cell or organism that has two complete sets of chromosomes, as opposed to haploid, or those with only one member of each pair of the same chromosomes. |
dominant | Term for an allele that masks the presence of an other allele, with respect to phenotypic expression, when occurring together in a heterozygous individual. |
degree heating week | the NOAA satellite-derived Degree Heating Week (DHW) is an experimental product designed to indicate the accumulated thermal stress that coral reefs experience |
seldi | Surface-Enhanced Laser Desorption/Ionisation invented by T |
gonochoric | having separate sexes |
brady | a prefix meaning "slow" |
trypsin | A proteolytic enzyme that cleaves (cuts) peptide chains next to the basic amino acids arginine and Iysine. |
bioenergy | energy made available by the combustion of materials derived from biological sources |
conductivity | a measure of a substance's ability to conduct heat or transmit electrical current |
apomorph | a derived character differing from the ancestral condition |
operational taxonomic unit | a terminal taxon; a group of organisms used in a taxonomic study without designation of taxonomic rank |
flower | The reproductive structure of angiosperms; a complete flower includes sepals, petals, stamens (male structures), and carpels (female structures). |
blowout depression | Saucer shaped depressions created by wind erosion |
carbon sequestration | the process of removing atmospheric carbon (carbon dioxide), either through biological processes (e.g., uptake by plants during photosynthesis),or geological processes through storage of carbon dioxide in underground reservoirs |
interactome | a more or less comprehensive set of interactions between elements within cells |
proportional | Cause and effect relationship between two variables where a positive or negative change in the quantity of one causes a predictable similar quantity change in the other. |
allele | Abbreviation of allelomorph, meaning alternative form of a gene at the same locus resulting from mutation. |
cross contamination | The undesirable transfer of material between two or more sources of physical evidence. |
exclusive economic zone | the sovereign waters of a nation, recognized internationally under the United Nations Convention on the Law of the SEA as extending out 200 nautical miles from shore |
clinical trial | A clinical trial is a research study in human volunteers to answer specific questions about vaccines or new therapies or new ways of using known treatments |
subduction zone | Linear area where tectonic subduction takes place. |
fathom | is a unit of length often used to measure depth of water and is equivalent to 6 feet or 1.8 meters |
reniform | kidney or bean-shaped |
similarity | Sequence identity between two nucleotide sequences |
query | A request for information submitted to a computerized database. |
repeat sequences | the length of a nucleotide sequence that is repeated in a tandem cluster. |
ultimate | last or farthest |
communication network | telecommunications infrastructure that transfers data from observing systems to data centers, and then to end users |
balanoid | acorn shaped |
anthropocentrism | Anthropocentrism is a view that regards humans as the central element of the universe |
sql | Structured Query Language |
population bottleneck | Type of genetic drift that occurs as the result of a population being drastically reduced in numbers by an event having little to do with the usual forces of natural selection. |
heterozygote | The presence of two dissimilar alleles at a given genetic locus. |
maximum likelihood | The statistical principle of estimating a parameter by finding the value of the parameters that maximizes the likelihood function. |
supergene | A cluster of tightly linked genes, which allow distinct alternative morphs to be maintained as a polymorphism within one population. |
dendrochronology | /den-droh-krə-NAWL-ə-jee/ n |
phylogram | a phylogenetic tree that depicts inferred historical relationships among entities |
morphological species | a typological species distinguished solely on the basis of morphology; also called "morphospecies" |
meridian | A circular arc that meets at the poles and connects all places of the same longitude. |
regenerative medicine | A term applied to new medical advances in which damaged body parts or body tissue is replaced or the body is encouraged to heal itself |
pill-rolling | Alternating movements of the thumb and forefinger that give the appearance of rolling a small object between the fingers; a characteristic slow tremor in the fingers of Parkinson's patients. |
osmosis | the passage of water through a semipermeable membrane from a solution with a lower concentration of solute to one with a higher concentration of solute |
setiform | bristle-like; brush-like |
port | A small plastic or metal container surgically placed under the skin and attached to a central venous catheter inside the body. Blood and fluids can enter or leave the body through the port using a special needle. |
starboard | the right side of a vessel to someone facing the bow or front |
tubules of cuvier | eversible toxic or sticky tubules associated with the bases of the respiratory trees of some sea cucumbers (Holothuroidea-Echinodermata) |
ingroup | A set of operational taxonomic units for which the phylogenetic relationships are being determined relative to an outgroup. |
outfall | the place where a sewer, drain, or stream discharges |
dominance variance | The variance in a quantitative trait that is caused by dominance |
interradial membrane | in fishes, the tissue between the fin rays or spines |
lanceolate | spear-shaped, tapered at both ends |
stroke | The death of nervous tissue in the brain, usually resulting from rupture or blockage of arteries in the head. |
sic | thus |
ecosystem based management | EBM integrates knowledge of ecological interrelationships to manage impacts within an ecosystem |
vermetid tube | the "tube" of the worm-shell snail |
vg | See genotypic variance. |
energy | The ability to bring about changes or to do work. |
global warming | the gradual increase in global temperatures caused by the emission of gases that trap the sun's heat in the Earth's atmosphere (greenhouse effect) |
clinical trial | Research conducted with volunteer patients, usually to evaluate a new treatment under strictly controlled conditions |
runoff | water that has been on land and moves seaward as a result of rain, flooding, irrigation or flushing |
gene | A section of DNA molecule that produces a functional RNA molecule |
p-value | in a statistical hypothesis test, the P value is the probability of observing a test statistic at least as extreme as the value actually observed, assuming that the null hypothesis is true |
orographic uplift | Uplift of an air mass because of a topographic obstruction |
similarity | How well one sequence matches another determined by calculation by an alignment program of identical and conserved residues. |
reproductive rate | The number of progeny produced by a parent per unit of time as per year. |
threshold | The point that must be exceeded to begin producing a given effect or result or to elicit a response. |
surface feeder | an organism, usually a fish, that takes its food from the air/water interface, or feeds just below the water surface, e.g., a needlefish |
uv irradiation | Electromagnetic radiation with a wavelength shorter than that of visible light (200-390 nm) |
one-tailed statistical test | Is an inferential statistical test where the values for which one can reject the null hypothesis are located entirely in one side of the center of the probability distribution. |
angel investor | wealthy individual who personally provides startup capital to very young companies to help them grow. |
tendriliform | having the form or shape of a tendril |
lepospondyle | Any member of an extinct subclass of amphibians, Lepospondyli, that gave rise to modern salamanders and frogs. |
dimethylformamide | /DIE-meth-əl-FORM-ə-mide/ A common solvent; a colorless liquid, miscible with water and most organic liquids. |
immigration | The influx of new individuals from other areas. |
informed consent | A term describing the responsibility of doctors or researchers to ensure that patients or people have an understanding of the relevant facts regarding their care or participation in research |
reticulate evolution | The fusing of previously separated branches on an evolutionary tree. |
dilution quenching | The reduction of the luminescence of a sample by dilution. |
particulate | a very small solid suspended in water |
efflux | an outward flow; flux of water, elements or gases out of an ecosystem or ecosystem component |
sedimentary rock | Rock formed from sand and mud that once settled in layers on the bottom of seas, lakes, and marshes |
continental margin | the zone of the sea floor reaching from the continents to the abyssal plain, including the continental shelf, the continental slope, and the continental rise. |
ptychocyst | a type of cnida used in tube construction by tube anemones (Ceriantharia) |
pollen tube guidance | In order to deliver immotile sperm cells to the female gametophyte in flowering plants, the pollen tube carrying the sperm cells grows towards the unfertilized female gametophyte |
exponential growth | growth in the size of a population in which the rate of growth increases as the size of the population increases; change in a population growth rate that is proportional to the size of the population |
bipinnaria larva | an early starfish larva with ciliated bands running about the periphery |
viable infant | When referring to a delivered or expelled fetus, the term "viable infant" means likely to survive to the point of sustaining life independently, given the benefit of available medical therapy |
intellectual property | A term that refers to the content of the human intellect, or the result of intellectual effort, which is considered to be unique and original and have value in the marketplace, and therefore requires legal protection and ownership |
subordinate | in taxonomy, belonging to a lower or inferior taxonomic rank |
costa | the extension of the septa outside the calyx into the coenosteum |
i | Idiotype |
obliquity | Tilt of the Earth's polar axis as measured from the perpendicular to the plane of the Earth's orbit around the Sun |
hyperpolarization | An electrical state in which the inside of the cell is more negative relative to the outside than at the resting membrane potential |
heterostyly | A polymorphism for distinct arrangements of anther and stigma. |
replicase | An enzyme that copies any form of genome (i.e., in the origin of life, the genome may not have been DNA or RNA based). |
antibody | A specific protein that interacts with a foreign substance (antigen) in a specific way. |
adhesion | the molecular force of attraction between two unlike materials that acts to hold them together |
parkinson's disease | A degenerative disorder of the central nervous system that often impairs the sufferer's motor skills and speech. |
sequence | 1) (noun) the structure of a DNA molecule in terms of the sequence of bases it contains |
official list | in taxonomy, a list of names or works which have been conserved or declared valid by action of the International Commission on Zoological Nomenclature |
dms | Dimethyl sulfate. |
growth rate | the increase in mass per unit of time |
phenotypic polymorphism | The existence of two or more distinct morphs (discrete forms), each represented in a population in high enough frequencies to be readily noticeable. |
convergent lifting | The vertical lifting of parcels of air through the convergence of opposing air masses in the atmosphere |
muciferous | producing or containing mucus |
zone of saturation | Groundwater zone within the Earth's bedrock where all available pores spaces are filled by water |
dibasic | /die-BASE-ick/ adj |
incross | Intercross |
l | "Lab on a chip" |
denticle | a little tooth |
megafauna | the largest size category of animals in a community |
primitive character | in evolution, an attribute of taxonomic group which all members of the group possess, i.e., the more common shared characters of a given group of organisms |
magma | molten rock that forms naturally within the Earth |
eon | Longest geologic time unit. |
infundibuliform | funnel-shaped |
bayh-dole act | provides the statutory basis and framework for federal technology transfer activities, including patenting and licensing federally funded inventions to commercial ventures. |
interorbital | the space between the eyes |
agricultural run-off | the drainage of water from agricultural land |
aggregate | A clumping of proteins inside cell bodies in the brain, which may be toxic |
institutional review board | an independent committee of scientists, physicians, and lay people that oversees clinical trials. |
weather | The state of the atmosphere at a specific time and place. |
totipotency | The ability of embryonic cells to retain the potential to form all parts of the animal. |
shower | precipitation that is intermittent in time, space or intensity |
base level | The subterranean elevation below which a stream cannot vertically erode sediment |
trade-off | A situation where one trait cannot be increased without decreasing another |
rotation | See Earth rotation. |
environmental system | A system where life interacts with the various abiotic components found in the atmosphere, hydrosphere, and lithosphere. |
prevailing wind | Dominant direction that a wind blows from for a location or region. |
cessation | To stop doing something |
interference | One crossover event inhibits the chances of another crossover event |
phenotype | The physical manifestation of a genetic trait such as shape, color, and blood type. |
malesia | a biogeographical region that includes the Malay Peninsula, Indonesia, the Philippines and New Guinea, based on a shared tropical flora derived mostly from Asia but also with numerous elements of the Antarctic flora |
density-dependent selection | Selection that occurs when relative fitness depends on population density. |
phenotype | Your appearance based on your genotype i.e what you look like. |
harvesting | removing tissue or cells from a donor and preserving them for transplantation |
lateral | refers to the side or flank of an animal |
topographic map | a map containing contours indicating lines of equal surface elevation (relief) |
laser | A device that emits an intense coherent monochromatic light beam. |
zeptomole | One-sextillionth mole; 10-21 mole. |
derived trait | A synapomorphy. |
mid-latitude cyclone | Cyclonic storm that forms primarily in the middle latitudes |
regression equation | Equation using regression to predict the value of a dependent variable from a known value of the independent variable. |
rubinstein-taybi syndrome | condition with multiple congenital anomalies including: mental deficiency, broad thumbs, small head, broad nasal bridge and beaked nose. |
give-up reef | a coral reef which is not growing fast enough to keep up with sea level rise |
hydrate | a compound produced when certain substances chemically combine with water; as a verb, it means to supply water to something that absorbs it |
gemmule | an asexual, spore-like reproductive unit in sponges, capable of overwintering and developing into an adult sponge the following summer |
bond | a physicochemical association between atoms |
fossa | a hole or cavity in the coral skeleton |
abiogenic | refers to things not involved with or produced by living organisms |
ocular | pertains to the eye |
southern cross | a small conspicuous constellation in the southern hemisphere in the Milky Way near Centaurus |
mean | Statistical measure of central tendency in a set of data |
monohybrid | A hybrid individual that is heterozygous for one gene or a single character. |
ess | See evolutionarily stable strategy. |
confluent | joined together |
recessive | a gene that is phenotypically manifest in the homozygous state but is masked in the presence of a dominant allele. |
campaniform | bell-shaped |
mineral | In nutrition, a chemical element other than hydrogen, oxygen, or nitrogen that an organism requires for proper body functioning. |
villi | see : chorionic villi sampling. |
orthographic projection | Map projection that presents the Earth's surface in two-dimensions as if it were being observed from a great distance in space |
sibling | 1 |
biotoxin | any poisonous or venemous substance produced by any living organism |
celsius scale | A temperature scale (OC) equal to 5/9 (OF - 32) that measures the freezing point of water at O°C and the boiling point of water at 100°C. |
oprs | Office for the Protection of Research Subjects |
cm | See centimorgan. |
hydrophobic | Literally, "water-fearing"; nonpolar compounds that are immiscible with water |
heavy metal | a metal having a specific gravity of 5.0 or greater |
col | Saddle like depression found between two mountain peaks |
buffered solution | a chemical solution that resists changes in pH despite the addition of small amounts of acids or bases |
surface water | an open body of water, such as a stream, lake, reservoir or wetland |
chromosomal fusion | See fusion, chromosomal. |
barrier island | a long, usually narrow accumulation of sand, that is separated from the mainland by open water (lagoons, bays, and estuaries) or by salt marshes |
environmental variance | The variance of the environmental deviation, var(E) = VE. |
controlled vocabulary | A restricted set of defined terms allowing the representation of complex information in a database |
sex chromosomes | The X and Y |
ampullae of lorenzini | small vesicles and pores around the head of a shark that form part of an extensive subcutaneous sensory network system that detects weak magnetic fields produced by other fishes, at least over short ranges |
hyalinization | a form of tissue degeneration in which the tissues develop a homogeneous and glassy appearance |
uep | See unique event polymorphism. |
inhibitor | A chemical compound that has the effect of blocking or slowing an enzymatic reaction. |
listserv ® | the most common kind of maillist found on the internet |
marine reserve | an area in which some or all extractive activities are prohibited |
dependent variable | In an experiment, the dependent variable is the factor that responds when another factor is manipulated. |
fluid-feeder | An animal that lives by sucking nutrient-rich fluids from another living organism. |
contour interval | Difference in elevation between two successive contour lines |
global temperature | an area-weighted mean of temperatures recorded at ground and sea surface -based observation sites around the globe, supplemented by satellite or model-based records in remote regions; usually referring to sea surface temperature |
frontal lifting | Lifting of a warmer or less dense air mass by a colder or more dense air mass at a frontal transitional zone. |
sql | a specialized language for sending queries to databases |
mesotidal | coastal ocean or waterway with a moderate mean tidal range, e.g., between 2 and 4 meters |
product | A compound formed as a result of an enzymatic reaction. |
component of fitness | See fitness component. |
savanna | a tropical and subtropical grasslands biome characterized by drought-resistant vegetation dominated by grasses with scattered trees and brush |
graupel | A type of precipitation that consists of a snow crystal and a raindrop frozen together |
south pole | Surface location defined by the intersection of the polar axis with Earth's surface in the Southern Hemisphere |
precautionary principle | A guiding principle in making decisions about the environment, cautioning to consider carefully the potential consequences of actions. |
precursor rna | see pre-messenger RNA. |
secondary male or female | a male or female that is the result of sex change |
ecological resilience | a measure of resistance to ecological disturbance and the speed of return to the equilibrium state of an ecosystem; also called "ecosystem resilience" |
cladist | a systematist who attempts to classify life forms according to their evolutionary relationships, not just overall similarity |
deposition | /DEP-ə-ZISH-shən/ Accumulation by sedimentation, chemical precipitation, or evaporation of a suspending solute. |
taxonomy | Ordered division of organisms into categories based on a set of characteristics used to assess similarities and differences, leading to a classification scheme; the branch of biology concerned with naming and classifying the diverse forms of life. |
submarine groove | a troughlike depression with vertical to overhanging walls which cut across the reef front at right angles |
polar nuclei | The central cell inherits two haploid nuclei, which localize to the micropylar pole of the cell and are called polar nuclei |
tm | Melting temperature |
1000 genomes project | The goal of the 1000 Genomes Project is to find most genetic variants that have frequencies of at least 1% in the populations studied using a light sequencing approach in many individuals |
heat capacity | Is the ratio of the amount of heat energy absorbed by a substance compared to its corresponding temperature rise. |
tm | The melting point for a double-stranded nucleic acid |
geotiff | a file format that embeds image registration information directly into a raster file; an industry-neutral raster file format widely used and recognized by all of the major GIS software vendors |
sandstone | A type of sedimentary rock that contains a large quantity of weathered quartz grains. |
hereditary | passed from parent to child |
ovum | The mature female gamete often called the egg. |
half-life | The time that it takes for half of the activity of a molecule to decay. |
demoid | /DEM-oid/ adj |
blue coral | the blue coral, Heliopora coerulea, is an octocoral that has a massive aragonite skeleton and is an important reef builder in some areas |
light year | Distance that light travels in the vacuum of space in one year |
mass-to-charge ratio | The ratio of the mass of an ion being analyzed to its charge. |
nonseptate | lacking cross walls (septa); also termed "aseptate" |
plasmodium | A single mass of cytoplasm containing many diploid nuclei that forms during the life cycle of some slime molds. |
cytology | The study of cells, their origin, structure, function, and pathology. |
putative gene split | Paralogues where one of them has been split partway along, but where the fragments are more than 1Mb apart, or on different chromosomes or strands. |
optimum | a state that is the best fit for the current situation |
spectrum | Is a graph that describes the quantity of radiation that is emitted from a body at particular wavelengths. |
perception | The interpretation of sensations by the brain. |
basin | A topographic rock structure whose shape is concave downwards. |
severe hemophilia | A categorical term used to describe someone with a factor VIII or IX level below 1% of normal blood levels of factor. |
tandem ms | A mass spectroscopic method used for high-throughput analysis of protein sequence |
standards | A group of reference points with known properties |
confidential | Information that will not be divulged to others without permission |
pustule | a pimple- or wart-like projection; a bump or raised knob on the outside surface of a mollusk shell |
polyphyletic group | a group of species that resemble each other but are evolved from different ancestors |
aeolian | pertaining to the erosion, transport, and deposition of materials by wind |
water column | the water mass between the surface and the bottom |
mesophyte | Plants that have moderate water requirements. |
corpus luteum | Structure that forms in the follicle if ovulation has occurred |
flavescent | yellowish color |
taxon | a taxonomic group or entity |
delta | the fan-shaped area at the mouth or lower end of a river formed by eroded material that has been carried downstream and dropped in quantities larger than can be carried off by tides or currents |
rudistid clam | Any member of an unusual group of clams that evolved in the Cretaceous |
røst reef | the world's largest known deep-water Lophelia coral complex |
hospice | A program designed for caring for terminally ill patients and their families. |
saturation mixing ratio | Mass of water vapor that a kilogram of dry air can hold at saturation |
loess | Deposits of silt laid down by aeolian processes over extensive areas of the mid-latitudes during glacial and postglacial times. |
cancriform | crab-shaped |
psychosis | Serious mental disorder |
crinose | hairy |
cast net | a circular net with weights attached to the perimeter |
standard curve | A quantitative research tool used to determine the concentration or copy number of an unknown substance |
c-value | See genome size. |
clinical trial | Clinical trials test the effectiveness of new drugs or treatments |
allele | A variant form of a given gene that occupies a specific chromosomal locus. |
polar easterlies | Winds that originate at the polar highs and blow to the subpolar lows in a east to west direction. |
ethics | the study of fundamental principles which defines values and determines moral duty and obligation. |
morgan | unit of inferred distance between genes on a chromosome |
paired-end reads | Sequencing reads from each end of the same DNA molecule |
recur | Happening again or come back |
phylliform | leaf-shaped |
riprap | large pieces of rock (usually 6 to 30 inches in diameter) which have undergone only primary crushing and sizing, or larger, uncrushed pieces |
terete | round in cross-section and tapering |
mass spectrometry | an analytical technique where ions are separated according to their ratio of charge to mass |
expected heterozygosity | See gene diversity. |
serpulid worm | a marine polychaete worm in the family Serpulidae which secretes and lives in a rigid calcareous tube |
segregrate | See segregration below. |
secondary structure | The arrangement of a protein chain into regular hydrogen-bonded structures such as a helix or b sheet. |
bcd | the BCD is a mandatory piece of equipment for SCUBA diving |
moss | A small, herbaceous nonvascular plant that is a member of the phylum Bryophyta. |
lead line | a line with a lead weight on the end used to measure depth |
epicenter | the point on the earth's surface directly above the hypocenter, where the energy of an earthquake is first released |
heat | The total amount of kinetic energy due to molecular motion in a body of matter |
landsat | Series of satellites launched by NASA for the purpose of remotely monitoring resources on the Earth |
plate | a rigid part of the Earth's crust and part of the Earth's upper mantle that moves and adjoins another one along a zone of seismic activity |
formenkreis | a group of related allopatric species or subspecies |
biotechnology | biological techniques used in applied research research and product development |
microbenthos | benthic organisms whose shortest dimension is less than 0.1 mm |
global warming | Warming of the Earth's average global temperature because of an increase in the concentration of greenhouse gases |
phase iii | Part of clinical development which is performed on a large number of patients to test the safety, efficacy and optimal dosage of an investigational new drug in the context of a complete therapy |
sponge | a multicellular animal (metazoa) below the tissue grade of construction |
neuroregenerative | See neuroprotective |
biomass | The dry weight of organic matter com: prising a group of organisms in a particular habitat. |
risk assessment | Calculation of an individual's risk, employing appropriate mathematical equations, of having inherited a certain gene variant, of developing a particular disorder, or of having a child with a certain disorder based upon analysis of multiple factors including family medical history and ethnic background |
key factor analysis | a statistical treatment of population data designed to identify factors most responsible for change in population size |
anchialine pool | a land-locked brackish body of water that displays tidal fluctuations but has no surface connection to the sea |
client | a software program that is used to contact and obtain data from a server software program on another computer, often across a great distance |
beaufort scale | a scale used to classify wind speeds, devised in 1805 by Admiral Francis Beaufort of the British Navy |
subadult | an individual similar to the adult in appearance but not yet capable of reproducing |
abaxial | away from, or distant from the axis |
adrenocorticotropic hormone | A hormone, produced by the anterior lobe of the pituitary gland, that stimulates the production of cortisol by the adrenal cortex. |
territory | An area or space occupied and defended by an individual or a group; trespassers are attacked (and usually defeated); may be the site of breeding, nesting, food gathering, or any combination thereof. |
markov chain | Any multivariate probability density whose independence diagram is a chain.The variables are ordered, and each variable "depends" only on its neighbors in the sense of being conditionally independent of the others. Markov chains are an integral component of hidden Markov models. |
chromatography | The separation of a mixture of substances by charge, size, or other property by allowing the mixture to partition between a moving phase and a stationary phase. |
leading eigenvector | Small deviations {x1, x2, ...} from equilibrium grow exponentially at a rate given by the leading eigenvalue λ and have the form xi = eiexp(λt) |
volcanism | the set of geological processes that result in the expulsion of lava, pyroclastics, and gases at the Earth's surface |
emission | any substance that is discharged into the soil, air or water |
chinook wind | The name of a North American wind that occurs on the leeward side of mountains |
agroforestry | a land-use system combining agriculture and forestry where trees and crops are interplanted |
umbraculiform | umbrella-shaped |
age class | a group of individuals of a species all of the same age |
terabyte | a measure of data size |
base | A substance that reduces the hydrogen ion concentration of a solution. |
ocean current | Large scale horizontal flow of ocean water that is persistent and driven by atmospheric circulation. |
intrafamilial variability | Variability in clinical presentation of a particular disorder among affected individuals within the same immediate or extended family |
institution | Any public or private entity or agency (including federal, state, and local agencies) |
chromosome aberration | 1 |
alternation of generations | A life cycle in which there is both a multicellular diploid form, the sporophyte, and a multicellular haploid form, the gametophyte; characteristic of plants and some algae. |
stream channel | Long trough-like depression that is normally occupied by the water in a stream. |
parenchyma | Thin-walled cells, varying in shape, size, and function. |
probability | the long term frequency of an event relative to all alternative events, and usually expressed as decimal fraction. |
radioactive decay | natural decay of the nucleus of an atom where alpha or beta and/or gamma rays are released at a fixed rate |
sister-group | The group or lineage of organisms that are the closest relatives of the lineage under consideration |
intercross | Outcross |
subpopulation | Subgroup of individuals isolated from other member of the larger or total population. |
h | Hematocrit |
transformation frequency | The relative proportion of cells in a population that are transformed in a single experiment. |
monera | Group, at the kingdom level, in the classification of life |
electrocyte | a cell that generates electricity |
two-tailed statistical test | Is an inferential statistical test where the values for which one can reject the null hypothesis are located either side of the center of the probability distribution. |
guyot | a flat-topped submarine mountain |
luminous flux | the rate of flow of light energy |
habitat distribution | the structure and spatial characterization of all habitat types in a specified area |
random drift | The random change in genotype frequency caused by random variation in individual reproduction |
photomosaic | an assemblage of photographs, each of which shows part of a region, and put together in such a way that each point in the region appears once and only once in the assemblage, and scale variation is minimized |
vulnerable species | a species that is particularly at risk because of low or declining numbers, a small range, or for some other reason, but is not threatened or endangered |
para | a prefix meaning "beside" |
double helix | The twisted-ladder shape that two strands of DNA form. |
piliform | hair-shaped |
benchmark | a measurement or standard that serves as a point of reference by which process performance is measured |
resolution | the ability to distinguish closely spaced objects on an image or photograph |
f-factor | An E |
viable | having the capacity to live, grow, germinate or develop; capable of life or normal growth and development |
erythema | abnormal reddening of the skin due to the dilation of capillaries |
shelf break | nearshore bathymetry characterized by rapid and substantial increases in depth that are continuous with the deeper parts of the ocean |
photobiology | The study of the effects of light on living systems. |
haltere | Sense organs found in Diptera on the second thoracic segment, evolutionarily derived by modification of the wings |
oxygen isotope ratio | an expression for the ratio of the 18O to 16O atoms in a sample relative to a standard, defined as: δ18O = (18O/16O sample - 18O/18O standard)/ 18O/16O standard |
foreground intensity | Foreground intensity is an overall measure of the intensity of the spot. |
white matter | Tracts of axons within the CNS. |
dacryelcosis | /dack-ree-el-KOH-səs/ n |
home page | the first page that a browser opens when accessing a Web address (URL) |
dissociation | the temporary or reversible chemical process in which a molecule or ion is broken down into smaller molecules or ions |
pfu | Abbreviation for plaque forming unit. |
vernacular name | the colloquial or common name of a taxon, i.e., in any language or form other than that of biological nomenclature |
scale | the degree of resolution at which ecological processes, structures, and changes across space and time are observed and measured |
copulation | the physical act of mating; sexual intercourse |
deviation | in statistics, the difference between an actual observation and the mean of all observations |
veneer reef | a reef with very little calcium carbonate accretion |
coevolution | a change in the genetic composition of one species (or infraspecific group) in response to a genetic change in another, i.e |
sex | Production of offspring that are a mixture between two different parental genotypes. |
european commission | a group, appointed by the agreement of the governments of the European Union, which initiates Union action and safeguards its treaties. |
null hypothesis | A hypothesis that is presumed true and against which alternative hypotheses are tested statistically. |
evolutionary character state reconstruction | See character state reconstruction. |
bipolar disorder | Depressive mental illness characterized by swings of mood from high to low; also called manic-depressive disorder. |
homocercal | a caudal fin with upper and lower lobes that are approximately equal in size; characteristic of most bony fishes |
character trait | Particular parts or properties of an organism |
genetic mutation | a change in the nucleotide sequence of a DNA molecule |
magnetosphere | Zone that surrounds the Earth that is influenced by the Earth's magnetic field. |
leeward | referring to the side of an island or reef that faces away from the prevailing wind |
steroids | Compounds that are derivatives of a tetracyclic structure composed of a cyclopentane ring fused to a substituted phenanthrene nucleus. |
variance | A statistical measure of the dispersion of observation values in a data set |
homeosis | Evolutionary alteration in the placement of different body parts. |
sinistral | left, as opposed to dextral, or right |
protista | earliest evolved eukaryotic kingdom |
historical data | data sets from previous studies |
strike | One of the directional properties of a geologic structure such as a fold or a fault |
gause's principle | See Competitive exclusion principle. |
rhyolite | A fine grained extrusive igneous rock that is rich in quartz and potassium feldspar |
ramus | a branch |
virology | the study of viruses |
sex hormone | that stimulates |
hidden markov model | A statistical model in which internal states are not visible but the outputs of these states are, and the outputs can therefore be used to infer the internal states |
dicot | /DIE-cawt/ n |
snow | A type of solid precipitation that forms in clouds with an air temperature below freezing |
zonal | Movement of wind or ocean waters in a direction that is roughly parallel to the lines of latitude. |
vasiform | vessel-shaped |
afferent | refers to a structure that leads to or toward a given position |
adsorbent | the solid substrate material onto which a substance is adsorbed |
kinetochore | A structure that attaches laterally to the centromere of a chromosome; it is the site of chromosome tubule attachment. |
bootstrap | Recalculation of results with randomly rearranged datasets to exclude the possibility of artefacts in data clustering. |
jackknifing | A statistical method in which new data sets are generated by resampling an original data set without replacement. |
cirrus | a slender, flexible appendage or part of an organism, usually having a tactile function |
phloem | from one part of a plant to another, with the direction of movement depending on the pressure gradients between source and sink regions. |
linear transect | a line of specified length laid out within a study site |
polymer | A long or larger molecule consisting of a chain of many repeating units, formed by chemically bonding together many identical or similar small molecules called monomers. |
miller cylindrical projection | Map projection that mathematically projects the Earth's surface onto a cylinder that is tangent at the equator |
ocellus | an eye-like spot, usually surrounded with a ring of a lighter color, e.g |
byte | a memory and data storage unit composed of contiguous bits, usually eight |
gencode | The aim of GENCODE as a sub-project of the ENCODE scale-up project is to annotate all evidence-based gene features in the entire human genome at a high accuracy |
endo- | a prefix meaning 'inside' |
barotrauma | an injury that results from rapid or extreme changes in pressure |
human geography | Field of knowledge that studies human-made features and phenomena on the Earth from a spatial perspective |
polytomy | A portion of a phylogenetic tree in which more than two branches emerge from a single node |
giesma | in a histological preparation, a stain which contains both basic and acidic dyes |
microwave | any electromagnetic radiation having a wavelength in the approximate range from one millimeter to one meter, the region between infrared and short-wave radio wavelengths |
saccate | sac-like |
peptidoglycan | The main component of the bacterial cell wall, consisting of a two-dimensional network of heteropolysaccharides running in one direction, cross-linked with polypeptides running in the perpendicular direction. |
ethics | A branch of philosophy that deals with morality |
population structure | Any deviation from the ideal state of a single panmictic population |
subthalamic nucleus | Subthalamic nucleus (STN) is a nerve center near the substantia nigra |
covariance matrix | An n × n matrix giving the covariances between a set of n variables |
expressivity | The amount someone is affected by one of their genes. For example |
long-day plant | A plant that flowers, usually in late spring or early summer, only when the light period is longer than a critical length. |
seismic | Shaking displacement usually caused by an earthquake. |
phototype | in taxonomy, a photograph of the type or a photograph serving as the type |
pygmy goby | the pygmy goby, Eviota sigillata, has the shortest life span of any known vertebrate on Earth, with a maximum life expectancy of 59 days |
flagellum | A hair-, whip-, or tinsel-like structure that serves to propel a motile cell. |
m | Map unit |
amelioration | The process in which DNA that has been acquired by lateral gene transfer changes in composition (e.g., G + C content and codon usage) to resemble the genome in which it resides. |
hydrology | Field of physical geography that studies the hydrosphere. |
eustatic | pertains to world-wide change in sea level, such as that caused by tectonic movements or expansion or contraction of glaciers |
dermad | /DERM-ad/ adv |
sex hormones | . Male gonads in mammals. Singular, testis. Paired organs that contain |
anthoblast | in stony corals, a young sessile polyp producing an anthocyathus, the disklike crown that separates from the stalk (anthocaulus) |
bifid | divided or cleft into two parts or lobes |
stem cells | Cells that have the potential to multiply indefinitely and become many different cell types. |
parts per thousand | number of parts of a substance found in one thousand parts of a particular gas, liquid, or solid |
volume | The occupation of space in three dimensions |
orogenic belt | A major range of mountains on the continents. |
ankylose | to fuse together |
transcription | and it serves to identify the start site for transcription. |
fertility | The ability to have children |
cytomegalovirus | A type of virus that can cause unapparent infections in healthy individuals but is dangerous to immunosuppressed patients |
diastasis | /die-AST-ə-səs/ n |
gene | a hereditary unit that occupies a certain position on a chromosome; a unit that has one or more specific effects on the phenotype, and can mutate to various allelic forms. |
microvilli | Thin fingerlike protrusions from the surface of a cell, often used to increase absorptive capacity or to trap food particles |
apert syndrome | a condition caused by the premature closure of the sutures of the skull bones, resulting in an altered head shape, with webbed fingers and toes |
coeloblastula | a larval form associated with oviparous development, with a cytologically undifferentiated central region, and an even distribution of small flagella |
pleiotropy | The ability of a single gene to have multiple effects. |
topography | pattern of elevation of the Earth's surface including the ocean bottom |
public policy | a set of action guidelines or rules that result from the actions or lack of actions of governmental entities. |
intranet | a private network inside an organization that uses the same kinds of software found on the public internet, but which is only for internal use |
anomaly | the deviation of a particular variable (e.g., temperature) from the mean or normal over a specified time |
circumesophageal nerve ring | anterior concentration of nervous tissue in several invertebrate groups, such as mollusks, annelid worms, sipunculids (peanut worms), and echiurans (spoon worms or innkeeper worms) |
competency | The combination of demonstrated knowledge, skills, and abilities. |
nasopalatine | NAY-zō-PAL-ə-teen/ Pertaining to the nose and palate. |
oblique aerial photograph | Photograph taken from a non-perpendicular angle from a platform in the atmosphere. |
neurones | Nerve cells, the structural and functional unit of the nervous system |
photomicrograph | a photograph taken through a microscope |
geothermal energy | Heat energy derived from the Earth's interior. |
uniformitarianism | Is a theory that rejects the idea that catastrophic forces were responsible for the current conditions on the Earth |
population density | the number of organisms per unit area or volume |
midnight zone | the layer of the ocean beneath the twilight zone, extending from 1000-4000 meters |
association | a group of species living in the same place at the same time |
teraflop | A measure of supercomputer speed equivalent to 10 to the power of 12 floating point operations per second. |
echolocation | the sonar-like ability used by bats, dolphins, some whales, and two groups of cave-dwelling birds to detect objects in their environment |
percentile | one of the division points that divides a set of ranked data into one hundred equal points; a value on a scale of zero to one hundred that indicates the percent of a distribution that is equal to or below it |
exponential phase | The period of an amplification reaction during which the product accumulates exponentially, approximately doubling with every cycle |
greenhouse effect | The warming of planet Earth due to the atmospheric accumulation of carbon dioxide, which absorbs reflected infrared radiation and re-refJects some of it back toward Earth. |
explanate coral colony | a colony that spreads horizontally as the branches fuse into a solid or near solid plate |
filiform | thread-shaped |
paternal half sib | Brother or sister having the same sire but having different dams. |
kelvin scale | an absolute scale of temperature in which each degree equals one kelvin |
myxopterygium | the copulatory organ or clasper of sharks, rays, skates and chimaeras |
manf | Abbreviation for "Mesencephalic Astrocyte-derived Neurotrophic Factor." MANF is a trophic factor that is still in the beginning stages of preclinical study |
collinear points | three or more points on the same line in a plane or in space |
kinetic energy | The energy due to motion. |
breast | in fishes, the anterior ventral surface under the head |
dactyl | /DAKT-əl/ n |
linguiform | tongue-shaped |
map unit | A unit of genetic length derived from recombination frequency |
imprimis | in the first place |
anterior | Referring to the head end of a bilaterally symmetrical animal. |
leptocephalus larva | a long, ribbon-like larval form that is characteristic of eels, tarpons, and bonefishes |
oligotrophic lake | Lake with a low supply of nutrients in its waters |
follicle-stimulating hormone | A tropic hormone produced and secreted by the anterior pituitary that stimulates the production of eggs by the ovaries and sperm by the testes |
industrial revolution | Major change in the economy and society of humans brought on by the use of machines and the efficient production of goods |
magnification | The height of the image divided by the height of the object |
trigonotarbid | Member of an order of extinct terrestrial spider-like animals (order Trigonotarbida). |
transfiguration | The act of transforming; a change in appearance or character or circumstances. |
teratology | The science concerned with malformations and monstrosities or serious deviations from normal structure |
genealogy | Record of descent tracing genetic relationships of individuals. |
avirulent | A term describing a pathogen that can only mildly harm, but not kill, the host plant. |
stereoisomer | A molecule that is a mirror image of another molecule with the same molecular formula. |
bimodal | a distribution in which the frequency curve has two peaks |
neuropharmacology | The branch of health science concerned with the study of the effects of drugs on the nervous system. |
geodesy | The science that measures the surface features of the Earth. |
twilight zone | the term, "twilight zone" represents a transition from a region that receives sunlight during the daylight hours, to a region that remains in perpetual darkness |
analgesia | the absence of pain in response to stimulation that would normally be painful |
ranked data | data for which the observations have been replaced by their numerical ranks from lowest to highest |
amniote | Any member of the Amniota, a group of vertebrates that includes all mammals, reptiles, and birds |
congruency | A measure of how similar are different phylogenetic trees containing the same operational taxonomic units (OTUs). |
nephelometric turbidity unit | unit of measure for the turbidity of water |
acid rain | the precipitation of sulfuric acid and other acids as rain |
sample size | Number of individuals drawn from a larger pool of individuals. |
beta animal | in animal behavior, the subordinate or second animal in a social group |
perihelion | It is the point in the Earth's orbit when it is closest to the Sun (147.5 million km) |
population genetics | "Population genetics is a field of biology that studies the genetic composition of biological populations, and the changes in genetic composition that result from the operation of various factors, including natural selection |
basalt | A hard, black volcanic rock with low silica content |
shelf escarpment | the edge of the bank/shelf where depth increases rapidly into deep oceanic water |
radiation | The emission of electromagnetic waves by all objects warmer than absolute zero. |
runoff | The topographic flow of water from precipitation to stream channels located at lower elevations |
isothermal layer | Vertical layer in the atmosphere where temperature remains unchanged |
areolate | appearance of a surface characterized by circular spots of tissue or areolae |
mound | an elongate offshore ridge of unconsolidated substrate; rocky remnants of eroding headlands (bars; shallow masses of limestone deposited by corals and coralline algae (shallow reefs) |
freely associated state | an "associated state" is used to describe a free relationship between a territory and a larger nation |
critical value | in statistics, the value of a test statistic at or beyond which the null hypothesis is rejected |
ozone hole | Is a sharp seasonal decrease in stratospheric ozone concentration that occurs over Antarctica in the spring |
anthropocentrism | A view that regards humans as the central element of the universe |
cephalic | pertaining to the head |
chi-squared test of association | Comparison of the observed frequencies with the frequencies that would be expected if the null hypothesis of no association were true. |
elastic deformation | Change in the shape of a material as the result of the force of compression or expansion |
tidelands | the zone between the mean high water and mean low water lines |
wildlife refuge | an area designated for the protection or replenishment of wild animals, within which hunting and fishing are either prohibited or strictly controlled |
nucleus | The cell structure that houses the chromosomes. |
cumulus cloud | Puffy clouds with relatively flat bases |
pellucid | transparent |
decubation | /deck-you-BAY-shən/ n |
exopodite | in crustaceans, the outer branch, or ramus, of a biramous appendage; also called "exopod" |
polar molecule | A molecule (such as water) with opposite charges on opposite sides. |
mass spectrometry | It is an analytical technique that measures the mas/charge ratio of the ions formed when a molecule or atom is ionized, vaporize and introduced into a vacuum. |
cell | the smallest unit of living matter |
octocorallia | a subclass of the Anthozoa that contains the sea pens, sea pansies, sea fans, whip corals, and pipe corals |
desalinization | the removal of salts from saline water to provide freshwater |
sustainable development | those efforts to guide economic growth in an environmentally sound manner with an emphasis on natural resource conservation |
propagule | Structure that develops into a plant. |
radiation therapy | Treatment with high-energy radiation from X-rays or other sources of radiation (like radioisotopes). |
acetyl coa | Acetyl-coenzyme A, a high-energy ester of acetic acid that is important both in the tricarboxylic acid cycle and in fatty acid biosynthesis. |
nervous system | All the nerve cells of an animal; the receptor-conductor-effector system; in humans, the nervous system consists of the central nervous system (brain and spinal cord) and the peripheral nervous system. |
handicap | A trait that signals a male’s genetic quality |
meteor | A body of matter that enters the Earth's atmosphere from space |
riverine | associated with a river and the area adjacent to it; includes all wetlands and deepwater habitats contained within a stream channel |
chi-square distribution | a distribution in which a variable is distributed like the sum of the the squares of any given independent random variable, each of which has a normal distribution with a mean of zero and a variance of one |
festination | An involuntary quickening of steps and shuffling after starting to walk |
geomorphic threshold | The amount of slow accumulated change a landform can take before it suddenly moves into an accelerated rate of change that takes it to a new system state. |
red blood cell | Blood cell that carries oxygen to the cells of the body and removes carbon dioxide. |
dermis | the layer of the skin beneath the epidermis |
autotomy | the voluntary shedding of an appendage by snapping it off the base; in corals, some, reproduce asexually by autotomy (fragmentation), for example, Fungia sp |
standard treatment | Treatment that has been proven effective and is commonly used. |
larva | A free-living, sexually immature form in some animal life cycles that may differ from the adult in morphology, nutrition, and habitat. |
drowned reef | a coral reef that grew too slowly and became covered by deeper and deeper water until the reef received too little light to support reef growth altogether; see "give-up reef" |
piezometer | an instrument for measuring pressure or compressibility |
dehydrate | /də-HIGH-drate, dee-/ v |
dactyloid | /DAKT-əl-oid/ adj |
ecozone | an area at the earth's surface representative of large and very generalized ecological units characterized by various abiotic and biotic factors |
arcgis | a group of geographic Information System (GIS) software product lines produced by the Environmental Systems Research Institute (ESRI) |
high pressure | An area of atmospheric pressure within the Earth's atmosphere that is above average |
raw format | A format in which the nucleotide sequence appears without headers or comments |
gorgonian | an anthozoan of the subclass Octocorallia, commonly called sea fans and sea whips |
tank | a hollow steel or aluminum cylinder, used to contain compressed air or other breathing gas mixtures used by scuba divers for an air supply; also called a cylinder or bottle |
salinity | a measure of the salt concentration of water |
decompression | a change from one ambient pressure to a lower ambient pressure as the scuba diver ascends |
multinational corporation | Corporation operating (with offices, factories, headquarters) in more than one country |
ambient pressure | the pressure surrounding an organism |
gene imprinting | The differential expression of a single gene according to its parental origin. |
branchiform | gill-shaped |
microfluidics chips | The chips contain very tiny channels in which the movement of fluids can be controlled |
alpha particle | a particle emitted from the nucleus of an atom, containing two protons and two neutrons, identical to the nucleus (without the electrons) of a helium atom |
utricle | A chamber behind the oval window that opens into the three semicircular canals. |
molecule | the smallest unit of any chemical substance that has an independent, separate existence and that still retains the properties of the chemical substance |
biosphere | Part of the Earth where life is found |
multituberculate | Any member of the extinct mammalian group Multituberculata |
phenogram | A branching diagram that links entities by estimates of overall similarity. |
dermatologic | Pertaining to the skin |
brine pool | concentrations of water on the ocean floor which have an extremely high salinity relative to the surrounding water |
non-invasive | Not breaking, cutting or entering the skin |
toxicant | any substance which is potentially toxic |
connectivity | a term from graph theory, which indicates the number of connections between nodes or vertices in a network |
permeability | A measure of the ability of soil, sediments, and rock to transport water horizontally and vertically |
passive search | a feeding strategy where the predator remains more or less stationary and ambushes the prey animal when it comes within range |
sundarbans | the world's largest mangrove forest located in Bangladesh at the edge of the delta where the Ganges, Brahmaputra and Meghna Rivers come together |
informatics | The study of the application of computer and statistical techniques to the management of information. |
anatomy | The study of the structure of an organism |
cost of meiosis | See cost of genome dilution. |
beta particle | a high-speed particle, identical to an electron, emitted from an atomic nucleus |
510 device | A medical device that is considered substantially equivalent to a device that was or is being legally marketed |
weather map | Map that displays the condition of the physical state of the atmosphere and its circulation at a specific time over a region of the Earth. |
contour interval | the difference in surface values between contours |
incidence | The number of new cases of a condition detected annually, per unit of the population |
habitat diversity | the number of different types of habitats within a given area |
cloning | The process of making identical genetic copies |
topical | Put on the skin, like a cream or lotion |
anatomically modern human | A member of the human lineage that is recognized by anthropologists as having essentially the same anatomy as present-day Homo sapiens. |
hydrophilic | Literally, "water-loving"; polar or charged compounds that are soluble in water. |
temperate bacteriophage | A bacterial virus that may become incorporated into the host-cell chromosome. |
medline | Medline is the National Library of Medicine's database of biomedical papers; it contains all citation information for each paper, as well as abstracts for most of the papers. |
siltstone | Fine grained sedimentary rock composed of lithified silt particles. |
desert | A terrestrial biome characterized by very low precipitation. |
dengue virus | an acute viral disease of humans charaterized by fever, rash, prostration, and lymphadenopathy; transmitted by the mosquito (Aedes aegypti) |
linear acceleration | the rate of change of velocity in a linear direction (along a straight line) with respect to time |
major histocompatibility complex | A group of genes that controls several aspects of the immune response |
actinometer | an instrument for measuring incident radiation |
action potential | changes in membrance potential that characterize a nerve impulse; essentially the depolarization of a neuron. |
mytiliform | in the shape of the mussel shell (genus Mytilus) |
seep | a small area where water that may be of a different temperature and density flows from below the seafloor and rises slowly into the ocean; a spot where water that is flowing below the earth's surface slowly oozes out to form a small pool or a spring abov |
electrospray ionization-mass spectrometry | A method for the solution ionization and mass analysis of macromolecules and small polar molecules. |
watercourse | a natural channel for water |
sahel | the transition zone in Africa between the Sahara Desert to the north and tropical forests to the south |
character | Either the genome as a whole can be in view, or a particular gene (allele), or combinations of genes |
inquiry | The search for information and explanation, often focused by specific questions. |
sustainability science | a multi-disciplinary approach to science that recognizes the limitations of traditional scientific inquiry in dealing with the complex reality of social institutions interacting with natural phenomena |
omega animal | in animal behavior, the animal which has the lowest social rank in its linear hierarchical group |
alopecia | Loss of hair, be it on the head or all over the body |
isotope | Form of an element where the number of neutrons in its atomic nucleus is different than the number of protons. |
photogenesis | light production |
vascular plant | Any member of the land plant group Tracheophyta, which have specialized tissues (xylem and phloem) for conducting fluid through the stem |
downwelling current | Ocean current that travels downward into the ocean because of the convergence of opposing horizontal currents or because of an accumulation of seawater. |
condensation | The change in state of matter from vapor to liquid that occurs with cooling |
wild type | The form of an organism that occurs most frequently in nature. |
savanna | A tropical grassland biome with scattered individual trees, large herbivores, and three distinct seasons based primarily on rainfall, maintained by occasional fires and drought. |
antibiotic | A substance that interfers with a particular step of cellular metabolism, causing either bactericidal or bacteriostatic inhibition; sometimes restricted to those having a natural biological origin. |
baud | unit of data transmission speed of one bit per second |
diverticulum | a blind sac branching off a cavity or canal |
intermittent stream | A stream that flows only for short periods over a year |
counter-illumination | a condition in which an animal has bioluminescent structures concentrated on its ventral surface so as to increase the effect of countershading |
abatement | reducing the degree or intensity of, or eliminating |
sponsor-investigator | An individual who both initiates and actually conducts, alone or with others, a clinical investigation |
riluzole | Glutamate antagonist approved in the united states to treat patients with ALS. |
intellectual property | The content of the human intellect, or the result of intellectual effort, which is considered to be unique and original and have value in the marketplace, and therefore requires legal protection and ownership |
photometer | an instrument for measuring light intensity |
solstice | either of the two times of the year when the sun is the greatest distance from the celestial equator, occurring about June 22 and December 22 |
relief | The range of topographic elevation within a specific area. |
transverse | crosswise |
eddy | A localized chaotic movement of air or liquid in a generally uniform larger flow. |
action potential | A rapid change in the membrane potential of an excitable cell, caused by stimulus-triggered, selective opening and closing of voltage-sensitive gates in sodium and potassium ion channels. |
topographic map | Map that displays topography through the use of elevation contour lines |
inductive reasoning | the process of observing data, recognizing patterns, and making generalizations from the observations; reasoning from particular facts to a general conclusion |
summary statistics | A numerical summary of some aspect of an experiment, typically an estimate of a parameter. |
sunrise | Moment of time when the Sun's edge first appears above the Earth's horizon. |
population viability | the probability that a population will persist for a specified period across its range despite normal fluctuations in population and environmental conditions |
turbidity | cloudy water, usually caused by the suspension of fine particles in the water column |
cucumiform | cucumber-like form |
stylet | a needle-like structure; in cnidarians, when a cnidocyte is fired, it is inverted and a stylet pierces the skin of the prey allowing toxins to be injected; a piercing structure in in some invertebrate mouthparts; also called "lancet" |
transition state | A high energy state through which substrates must pass during the course of an enzymatic reaction. |
cephalothorax | the region of the body in decapod crustaceans that is covered by the carapace, with the boundary between the fused head and thorax indicated by the cervical groove |
bone marrow harvest | The removal and collection of bone marrow, usually done prior to a bone marrow transplant, but sometimes done as a preventative measure in case of relapse. |
neurosurgeon | A doctor who operates on the brain and central nervous system. |
return on investment | profit (or loss) on an investment, often expressed as a percentage. |
ovum | The female gamete; the haploid, unfertilized egg, which is usually a relatively large, nonmotile cell. |
trace evidence | Physical evidence that results from the transfer of small quantities of materials (e.g., hair, textile fibers, paint chips, glass fragments, gunshot residue particles) which may link an offender with a scene if they can be identified as having originated in the same place or as being from the same source. |
dew point | Dew point is the temperature at which water vapor saturates from an air mass into liquid or solid usually forming rain, snow, frost or dew |
z dna | An alternative, left-handed form of the double helix. |
sens. lat. | in the broad sense (sensu lato) |
infiltration | The absorption and downward movement of water into the soil layer. |
gas | A state of matter where molecules are free to move in any direction they like |
x-ray diffraction | The scattering of x-rays from a crystal, resulting in an interference pattern used to determine the structure of the crystal. |
p-wave | A seismic wave that moves material in push-pull fashion in the direction of its travel |
postencephalitic parkinsonism | A Parkinson's-like illness, cases of which followed the worldwide flu epidemic of 1918; also called von Economo encephalitis. |
reciprocally monophyletic | Two groups for which, at every locus, all genes within the group are more closely related to each other than they are to any organisms outside the group |
messenger rna | A type of RNA involved in protein production |
distal | the direction away from the midline of the body; the opposite of proximal |
asymptomatic | showing no outward signs of a condition |
tight junction | A type of intercellular junction in animal cells that prevents the leakage of material between cells. |
siliceous | composed of silicon or primarily of silicon |
homunculus | A “little man” that was supposedly introduced into a fertilized egg by the sperm and that guided its development |
foliform | leaf-shaped |
linear equation | An equation of the form y = a + bx, where the variable x does not appear as a power or special function. |
pharynx | An area in the vertebrate throat where air and food passages cross; in flatworms, the muscular tube that protrudes from the ventral side of the worm and ends in the mouth. |
ct | See threshold cycle. |
argo project | Argo is a global array of 3,000 free-drifting profiling floats that measures the temperature and salinity of the upper 2000 m of the ocean |
arcscene | a 3D visualization application designed by ESRI that allows one to view GIS data in three dimensions |
horst fault | A fault that is produced when two reverse faults cause a block of rock to be push up. |
hypotension | Low blood pressure |
spur and groove | a system of shallow ridges (spurs) separated by deep channels (grooves) oriented perpendicular to the reef crest and extending down the upper seaward slope |
calcareous algae | algae which deposit calcium carbonate in its tissues |
neurologic | Involving the nerves or nervous system. |
filamentous | slender and/or threadlike |
walking shark | a small, slender-bodied, bottom-dwelling epaulette shark (Hemiscyllium sp), one of the carpet sharks, that uses its pectoral fins to "walk" across the seafloor |
differential diagnosis | see "diagnosis, differential" |
pedal laceration | a type of asexual reproduction in some sea anemones in which parts of the pedal disc break off and are left behind as the anemone moves |
hormone | A substance formed in a specialized gland or group of cells that has regulatory effects on another gland or group of cells |
darwinian medicine | The application of evolutionary principles to medicine. |
summer | Season between spring and fall |
contiguous | sharing an edge or boundary; touching; neighboring; adjacent |
amoeboid | amoeba-like |
genetic profile | A collection of information about a person's genes. |
signal to noise ratio | A measure of signal strength relative to background noise. |
propagule | a structure for mangrove reproduction |
epizootiology | the study of the factors which determine frequencies and distributions of infectious diseases among non-human animals |
deep scattering layer | a thin sound-reflecting layer of zooplankton and nekton that ascends toward the surface at night and descends each day (diurnal vertical migration) in response to changing levels of light |
coevolution | The coordinated evolution of two or more species that interact and exert selective pressures on each other that can cause each species to undergo associated adaptations |
labyrinthodont | Common name for any member of the extinct superoder Labyrinthodontia |
frequency-dependent selection | Selection that occurs when relative fitness depends on genotype frequencies. |
glia | Supporting cells that are essential for the structural integrity of the nervous system and for the normal functioning of neurons. |
multiple alignment | A Multiple Alignment of k sequences is a rectangular array, consisting of characters taken from the alphabet A , that satisfies the following conditions: There are exactly k rows; ignoring the gap character, row number i is exactly the sequence s I ; and each column contains at least one character different from "-" |
helix | spiral in form. |
turquoise | blue green color |
nare | nostril; an opening, external and internal, of the nasal passage |
molarity | A common measure of solute concentration, referring to the number of moles of solute per liter of solution. |
theoretical probability | the chances of events happening as determined by calculating results that would occur under ideal circumstances |
work | in physics, the transfer of energy from one object or system to another by applying a force over a distance |
var | See variance. |
histogram | a bar graph in which the area over each class interval is proportional to the relative frequency of data within this interval |
alima | a larval stage of a mantis shrimp |
descendants | Your parent's descendants are their children (including you!) and their children's families |
ecological efficiency | The ratio of net productivity at one trophic level to net productivity at the next lower level. |
net photosynthetic rate | the total rate of photosynthetic CO2 fixation minus the rate of loss of CO2 during respiration |
nyctalgia | nick-TAWL-zhə/ Nocturnal pain. |
immunosuppression | Suppression of the immune response. |
parasite | an organism that lives in or on the living tissue of a host organism |
bimaculate | having two spots |
applied research | aimed at gaining knowledge or understanding to determine the means by which a specific recognized need may be met |
growth ring | Any of the rings that can be seen in a cross-section of a woody stem, such as a tree trunk |
sand flat | sandy areas found in depressions and gullies in a coral reef, or between patch reefs, or in deeper areas below or beyond the reef |
valve | the shell or shells of certain organisms, such as clams, oysters, and snails |
spermatium | a non-motile male gamete produced by a spermatangium in red algae |
coalescence time | The time back to when two genes share a common ancestor. |
soleiform | slipper-shaped |
faginism | cannibalism by adults on their young |
percolation | the movement of water through the openings in rock or soil |
watt | A metric unit of measurement of the intensity of radiation in Watts over a square meter surface (W/m2 or W m-2). |
palea | The smaller of the two bracts (the other being the lemma) that encloses the stamens and pistil in a grass floret. |
endopinacoderm | in sponges, a surface lined with endopinacocytes |
truncation | To shorten |
hydrological cycle | the movement of water in all of its phases (gas, liquid, solid) from the Earth to the atmosphere and back to the Earth |
sill | the lowest point on a submarine ridge or saddle at a relatively shallow depth, separating a basin from an adjacent sea or another basin |
fetch | The distance of open water in one direction across a body of water over which wind can blow. |
tropical depression | An organized group of thunderstorms often found over a tropical ocean that generates a cyclonic flow of between 37 and 63 kilometers per hour |
fin | a rubber or plastic shoe-like device attached to the feet to increase surface area for greater thrust while swimming; they may be open heeled or full-footed |
mesozoic era | between 225 and 185 million years ago |
adpressed | pressed close to or lying flat against something; apressed |
dryopithecine | /DRY-oh-PITH-ə-seen/ n |
germinal epithelium | 1 |
nucleus | The structure within the cell that contains the chromosomes. |
community boundary | Spatial edge of a unique community. |
genetic predisposition | Having some genetic factor(s) that may make an individual more likely to develop a particular condition than the general population. |
trifurcate | dividing into three parts |
alveolate | Member of Alveolata, one of the major kingdoms of eukaryotes |
time lapse photography | a photographic process in which a series of photographs are taken of the same basic scene at regular, timed intervals from the same viewpoint |
map | An abstraction of the real world that is used to depict, analyze, store, and communicate spatially organized information about physical and cultural phenomena. |
ridge | a long, narrow, continuous elevation of the sea floor covered with shallow water which may support unconsolidated sediments, rocks, or shallow reefs |
source region | Area where air masses originate and come to possess their moisture and temperature characteristics. |
deep brain stimulation | Deep Brain Stimulation (DBS) is a surgical procedure that uses a surgically implanted, battery-operated medical device called a neurostimulator - similar to a heart pacemaker and approximately the size of a stopwatch - to deliver electrical stimulation to targeted areas in the brain that control movement, blocking the abnormal nerve signals that cause tremor and PD symptoms |
denatured alcohol | ethyl alcohol (ethanol) to which a poisonous substance, such as acetone or methanol, has been added to make it unfit for consumption |
nephrotoxicity | toxicity to the kidney. |
variations | The deCODEme Complete Scan measures over one million genomic locations with single nucleotide variations (SNPs ). |
monoculture | Cultivation of large land areas with a single plant variety. |
nucleomorph | A highly reduced relic of a nucleus |
dendrology | /den-DRAWL-ə-jee/ n |
covalence | the number of pairs of electrons an atom can share with other atoms |
axillary bud | A structure that has the potential to form a lateral shoot, or branch |
philopatry | refers to the drive or tendency of an individual to return to, or stay in, its home area |
nanometer | A unit of measure in the metric system |
almost atoll | an atoll whose rim is less than 75 percent complete as a circle at low tide |
palsy | Antiquated term for paralysis or an uncontrollable shaking of the body |
mass spectrometry | Technique uesed to measure and analyse a substance in terms of the ratios of mass to charge of its components. |
allostery | A change in the shape of a protein or ribozyme due to binding of a molecule at one site, which then changes activity at a distant site. |
polymer | A large molecule (macromolecule) composed of multiple repeated units which are identical or similar. |
rosette | rose-shaped in appearance; arranged in a fashion resembling a rose flower |
prophylaxis | treatment to prevent bleeding episodes |
drop net | a small, usually circular net with weights around the perimeter and a float in the center |
pacific high | High pressure system that develops over the central Pacific Ocean near the Hawaiian Islands |
telogen | The last phase of the hair growth cycle when the hair root becomes a bulbous shaped root. |
bedded | stratified; deposited or arranged in horizontal layers, as in stratified rock |
fimbriae | Thin, proteinaceous filaments that extend from the cell surface of microbial cells and facilate adhesion to solid surfaces or other cells. |
mean low tide | the average altitude of all low tides recorded at a given place over a long period of time |
imprinting | The ‘memory' held by a chromosome as to whether it was inherited from the mother or the father |
retrose | turned backwards |
internet service provider | a company or organization that provides access to the Internet |
cathode | A negatively charged electrode. |
phylogeny | The historical relationships among lineages of organisms or their parts (e.g |
twilight | the time immediately before sunrise and after sunset when the sky remains illuminated |
genetic map | An ordered list of genetic loci (genes or other genetic markers) along a chromosome. |
schizophrenia | Severe mental disturbance characterized by psychotic episodes in which patients lose the ability to distinguish reality from hallucination. |
falciform | curved like a long, narrow scythe |
blat | An mRNA/DNA and cross-species protein sequence analysis tool to quickly find sequences of 95% and greater similarity of length 40 bases or more |
multimodal distribution | a distribution with more than one mode |
spathiform | resembling a rounded pole in form |
ionizing radiation | Radiation consisting of high-energy particles that can strip electrons from atoms, thereby changing their chemical reactivity, which in turn can cause biological damage. |
rivulated | marked by irregular streaks |
dark-field microscope | a microscope that has a special condenser and objective with a diaphragm that scatters light from the observed object |
restriction analysis | Determination of the number and sizes of the DNA fragments produced when a particular DNA molecule is cut with a particular restriction endonuclease. |
virulence gene | Slang for a gene encoding a virulence factor. |
azure | light or sky blue color |
fieldwork | Behavioral, social, or anthropological research involving the study or persons or groups in their own environment and without manipulation for research purposes |
sial layer | The part of the crust that forms the continents and is composed of relatively light, granitic rocks. |
natural logarithm | The natural logarithm log(x) is the inverse of the exponential function: log(exp(y)) = y |
mabthera | UK trade name for rituxan. |
stereotactic | Refers to use of precise coordinates to identify deep structures of the brain |
denitrify | to remove nitrogen from any substance or chemical compound |
temperate | region in which the climate undergoes seasonal change in temperature and moisture |
homosphere | The lower layer in a two part classification of the atmosphere based on the general homogeneity of chemical composition |
fractal | the smallest part of a mathematical set of numbers which when repeated or scaled will maintain the primary permutation; an object which is self-similar at all scales |
qualitative analysis | the analysis of a phenomenon to determine its qualitative characteristics versus its quantitative characteristics, i.e., characteristics for which precise numerical characterization is not appropriate |
lux | unit of illumination equal to one lumen per square meter |
genome | It may be cut from one place and moved to another — a recontextualization that may have profound functional effects — or it may be copied and inserted elsewhere, in which case it adds to the total content of the genome |
sky | see: Spectral karyotype SKY. |
monomorphic | occurring in only one form |
mutation | Change in the number, arrangement, or molecular sequence of a gene |
worldfish center | an autonomous, nonprofit organization which was established as an international center in 1977 |
fauna | the entire group of animals found in an area |
remote sensing tool | an instrument used in remote sensing often combined with a geographic information system to provide synoptic and objective views and data of the environment |
metastasis | Spread of cancer cells from the original site to other parts of the body. |
correlation coefficient | The most commonly used measure of correlation between two variables (x, y) |
chromogenic | Color-generating |
ocean iron fertilization | the intentional introduction of iron to the upper ocean in order to increase the growth of phytoplankton blooms and to sequester carbon dioxide from the atmosphere |
loh | See loss of heterozygosity. |
latent heat of condensation | The amount of heat energy release to the environment when a gas changes its state to a liquid |
quiescent | Silent or inactive. |
in litt. | in correspondence or communicated in writing; used for an unpublished source of information (in litteris) |
non-extant | no longer existing |
pinacoderm | the external surface of a sponge, lined with pinacocytes in a single cellular layer |
central venous catheter | A plastic tube inserted in a vein under the skin of the chest to remove or introduce fluids into the body |
drug discovery cycle | The cycle of events required to develop a new drug |
mutation | The genetically inheritable alteration of a gene or group of genes. |
descent with modification | Darwin's initial phrase for the general process of evolution. |
dominance deviation | Deviation of the genetic value from the additive genetic value (breeding value) for genotypes at a single locus. |
chromosome | A group of genes/DNA that are contiguous, a functional unit |
subatomic particles | Extremely small particles that make up the internal structure of atoms. |
neocotype | in taxonomy, a replacement syntype, q.v., designated in the absence of the original type or type series |
sex ratio | The ratio of males to females in the population. |
eddy diffusion | Mixing of the atmosphere by chaotic air currents. |
depolarization | An electrical state in an excitable cell whereby the inside of the cell is made less negative relative to the outside than at the resting membrane potential |
locus | The site in a linkage map or on a chromosome |
south magnetic pole | Location in the Southern Hemisphere where the lines of force from Earth's magnetic field are vertical |
body wave | Type of seismic wave that travels through the interior of Earth. |
geoid | the hypothetical surface of the Earth that coincides everywhere with the mean sea level |
myosin | A type of protein filament that interacts with actin filaments to cause cell contraction. |
sex determination | The genetic specification of the sex of an individual by the genes of the X and Y chromosomes. |
lycophyte | Member of a diverse group of early land plants including the lycopods and zosterophylls. |
targeted mutagenesis | Deliberate change in the genetic structure directed at a specific site on the chromosome |
microelectrodes | Thin metallic tubes inserted into the brain and guided by stereotactic methods |
kin discrimination | The ability to distinguish between related and unrelated individuals. |
cystid | the exoskeleton and body wall of the stationary trunk of bryozoans |
equatorial current | an ocean current which flows westerly near the equator |
stabilizing selection | Selection that favors intermediate trait values. |
key | a small, low coastal island or emergent reef of sand or coral; flat mound of sand and admixed coral fragments built upon a reef flat or just above high tide level |
arborescent | having a large tree-like appearance |
oceanic crust | that part of the Earth's crust underlying the ocean basins |
endozooic | living inside an animal |
surface heat flux | Process where heat energy is transferred into land and ocean surfaces on the Earth |
venturi | An increase in the velocity of a fluid or gas due to the constriction of flow. |
paresthesia | abnormal neurological sensations which include: numbness, tingling, burning, prickling and hyperesthesia (increased sensitivity); one possible symptom of ciguatera poisoning |
frameshift mutation | A mutation occurring when the number of nucleotides inserted or deleted is not a multiple of three, resulting in the improper grouping of the following nucleotides into codons. |
pressure gradient force | Force due to spatial differences in atmospheric pressure |
papahanaumokuakea | Hawaiian name for the Northwestern Hawaiian Islands Marine National Monument |
follicle-stimulating hormone | A protein hormone secreted by the anterior pituitary that stimulates the production of eggs by the ovaries and sperm by the testes. |
ex situ conservation | the preservation of components of biological diversity outside their natural habitats, e.g., in zoos, aquaria, botanic gardens and gene banks |
dumb money | funding from investors who cannot provide additional benefits such as guidance or networking. |
filter feeder | an organism that feeds by capturing particles suspended in the water column |
adaxial | situated on the side of, or facing toward an axis |
gastrodermis | the epithelial lining of the gastrovascular (digestive) cavity of cnidarians and ctenophores (comb jellies) |
lcm | Laser Capture Microdissection conceived and first developed as a prototype research tool at the National Institute of Child Health and Human Development (NICHD) and the National Cancer Institute (NCI) of the National Institutes of Health (NIH) |
stele | The vascular tissue of a stem or root |
configuration | (in software) The complete ordering and description of all parts of a software or database system. Configuration management is the use of software to identify, inventory and maintain the component modules that together comprise one or more systems or products. |
gular | of, relating to, or located on the throat |
telson | the terminal joint or movable piece at the end of the abdomen of crustaceans; middle piece of the tail fan |
taper | decrease, reduce |
water column | the entire depth of a water body, from its surface to the bottom. |
carboxyl group | The acidic -COOH functional group found in organic molecules. |
allele | An allele is an alternative form of a nucleotide sequence, a gene or a locus in the genome |
outer core | Outer region of the Earth's core |
binomial nomenclature | Naming scheme for species in which there is a genus name and a species name. |
calcariform | spur-like |
modifier | In the strict sense, an allele that has no direct effect on fitness but does have some other effect on the genetic system that may be indirectly selected |
subgular | below the throat |
radioactive decay | Natural decay of the nucleus of an atom where alpha or beta particle and/or gamma rays are released at a fixed rate. |
f | Failed Therapy |
determinate growth | A type of growth characteristic of animals, in which the organism stops growing after it reaches a certain size. |
yearling | a one-year-old individual in its second year of life |
sciophilous | thriving in conditions of low light intensity |
nucleus | a comparatively large structure found in all eukaryotic cells |
aphorism | a concise statement of a general truth; a short pithy instructive saying |
evanescent | short-lived; temporary; soon disappearing |
self-pollination | The transfer of pollen from anther to stigma in the same flower or to another flower of the same plant, leading to self-fertilization. |
energy | the capacity for doing work |
cross reacting material | See CRM. |
precipitation | any form of water that falls from the atmosphere to the surface of the earth, i.e., rain, snow, sleet, and hail |
pollen | the grains that contain the male reproductive cells of a seed plant. |
diuretic | Medicine that makes you urinate, sometimes called a "water pill" |
viable | The ability of an organism to grow and divide. |
charles law | under conditions of constant pressure and quantity, there is a direct relationship between the volume and absolute temperature for an ideal gas |
weigle reactivation | The increased survival of phage after UV irradiation if they infect cells that have previously been exposed to a lose dose of UV |
plate tectonics | The mechanism by which the plates that make up the surface of the Earth interact with one another, including the formation and subduction of oceanic crust. |
tide | the periodic rising and falling of the water that results from the gravitational attraction of the moon and sun acting on the rotating earth |
box plots | Box plots consist of boxes with a central line and two tails |
shale | Fine grained sedimentary rock composed of lithified clay particles. |
incorporated territory | equivalent to Territory, a United States insular area, of which only one territory exists currently, Palmyra Atoll, in which the United States Congress has applied the full corpus of the United States Constitution as it applies in the several States |
palmate | hand-shaped |
helical flow | Movement of water within a stream that occurs as spiral flows. |
osmosis | The diffusion of water through a semi-permeable membrane down the water potential gradient (from areas of high water potential to areas of low water potential) |
allele | One of two or more alternative forms of a gene |
gigabyte | a measurement of storage space equal to a thousand megabytes |
zoogenic | pertaining to changes caused by animals or their activities |
in-laws | Related by marriage |
cteniform | comb-shaped |
dominance deviation | The difference between the trait value of a genotype and the value expected with no dominance. |
tisler reef | a deep water Lophelia reef located in the Skagerrak, the submarine border between Norway and Sweden, at depths of 74 to 155 m |
northern blot | A technique for analyzing mixtures of RNA, whereby the presence and rough size of one particular type of RNA (usually an mRNA) can be ascertained |
low tide | the lowest level of the tide; the minimum height reached by each falling tide |
acanthaceous | being armed with spines or other pointed projections |
anastomose | a term that refers to coral branches which grow back together after the initial division |
electrophoresis | The movement of particles in an electrical field |
last_update | "Last_update" in the GO annotations page indicates the most recent date that information was entered into the database for a given locus. |
darwin mounds | two areas of hundreds of sand and cold-water coral mounds at depths of about 1,000 m, in the northeast corner of the Rockall trough, approximately 185 km northwest of the northwest tip of Scotland |
url | a website address, such as: www.coris.noaa.gov |
resonance | literally means "to vibrate with" |
ncrna | Short non-coding RNAs such as rRNA, scRNA, snTNA, snoRNA and miRNA are annotated by the Ensembl ncRNA pipeline (see article) |
ctenophore | Member of a major animal phylum of solitary gelatinous marine animals commonly called comb jellies or sea gooseberries (phylum Ctenophora) |
linkage disequilibrium | Departure from the predicted frequencies of multiple locus gamete types assuming alleles are randomly associated |
selection differential | The difference in mean trait value between those that reproduce and the original population. |
flaviviridae | a type of virus |
stream flow | The flow of water in a river or stream channel. |
aspergilliform | brush-shaped |
ion | a positively or negatively charged atom produced through loss or gain of one or more electrons |
coalesce | to come together so as to form one whole; to fuse |
ylid | A compound in which adjacent, covalently-bonded atoms, both having an electronic octet, have opposite charges. |
normalizer | Used in both absolute and relative quantification studies to normalize quantitative results of test samples in such a way that the data becomes biologically meaningful. |
tripton | the nonliving particulate matter in bodies of water |
bank reef | large reef growths, generally having irregular shape, which develop over submerged highs of tectonic or other origin and are surrounded by deeper waters |
genotype | The structure of DNA that determines the expression of a trait (phenotype). |
earthquake | Is a sudden motion or trembling in the Earth |
density-gradient centrifugation | The separation, by centrifugation, of molecules according to their density, in a gradient varying in solute concentration. |
mutation | a change in the number, arrangement, or molecular sequence of a gene. |
adh | Abbreviation of antidiuretic hormone. |
escarpment | a steep slope or long cliff that results from erosion or faulting and separates two relatively level areas of differing elevations |
dentate | having teeth or tooth-like points; serrate |
case | A case is the biological unit under study; for example, one soybean, one mouse or one human. |
survivorship curve | A plot of the number of members of a cohort that are still alive at each age; one way to represent age-specific mortality. |
makatea | a fossil coral reef |
regression | a statistical technique used to establish the relationship of a dependent variable and one or more independent variables |
h | Hairpin |
suborder | a taxonomic group that is a subdivision of an order |
data mining | using computers to analyze masses of information to discover trends and patterns. |
ostracode | Any member of the crustacean class Ostracoda, which have a shrimp-like body in a bivalved shell |
set | in mathematics, a collection of things without regard to their order |
polyphen | A tool which predicts the variation effect on protein function based on physical and comparative considerations |
ribosome | Particle composed of ribosomal RNAs |
saturation | Atmospheric condition where water is changing its phase to liquid or solid |
supine | Lying on the back |
chronograph | an instrument for recording the moment of an event |
neuropodium | a lobe of the parapodium closer to the ventral side in polychaete worms |
diploid | Possessing two sets of chromosomes — that is, possessing a pair of each type of chromosome, with one member of the pair inherited maternally and one inherited paternally |
double helix | These paired bases form the "rungs" on the spiraling DNA "ladder", and the bases in each pair are nearly always complementary to each other |
independent variable | A variable that influences the measure of a second characteristic (the dependent variable). |
species group | a group of species considered together, often because they are difficult to differentiate without detailed examination, e.g., very similar species; a group of closely related species; a superspecies |
character state reconstruction | A method used to infer ancestral and derived character states and traits. |
hydrothermal vent | a sea floor fissure from which a spring of geothermally heated mineral and gas rich seawater issues |
acre | an area equal to 43,560 square feet or 4,046.87 square meters |
counter shading | protective body coloration where the dorsal surface (above) is dark and the ventral surface (below) is lighter |
neap tide | a tide that occurs when the difference between high and low tide is least; the lowest level of high tide |
epipelagic zone | the surface layer of the ocean (also called the sunlight zone) which extends from the surface to 200 meters |
symplesimorphy | A shared ancestral character state. |
secchi depth | the depth at which a Secchi disk disappears from view as it is lowered in water Secchi disk a white disk 20-30 cm in diameter, used as a qualitative way of measuring water clarity |
adanal | located near the anus |
keyword | A keyword is a word identified as particularly informative about an object |